Input parameters:

  Query = E01G4.6 (Len=884)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (E01G4.6, Len=884):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRIIACSLLIASLIPTVIGLKSNRTSCFHYVSCLEATEANLKQCAGGTAISLTLEAKDVNIRDLVKYRALEFVGCQDRLL 80  
WD40-rpts      (_________________________________________________________WD 1__________________

Query       81 KEVVDFESLQILVNEDARECFEKLPESSKRVEEFTDSCDYVQPVSRNASKGDALQCLIEFKQDREYCESLLECCPDHTRC 160 
WD40-rpts      ______________________________________)                                         

Query      161 GERMNAVSLSYQNARVKAEQIVYSMISCIVVNDPRFLREGARLQSLRDPYRNAGVPFLRPDAYTEARITRRLALTSTATL 240 
WD40-rpts                                                                                      

Query      241 SQRRERFLKKYSQIRQVVAQNLFGQQQRLTRPVEDLVTETSSKLAVEEAPEETTTQEETTTDASEVTTTKAVEEATEEVT 320 
WD40-rpts                                                                                      

Query      321 EEATEATEAPVATTKESSEMHVNTIRNMIRSASEKDLSKYVTLISEGKFSELFELAEQKKLTLTSKFDEKLSSKMAKLKD 400 
WD40-rpts                                                                                      

Query      401 LINEALSEKEKSGEIEQAMEKFEKPEKSELVAMEDKDTPAVFTISDSLKHKKAEAKLAHTIVSRNVVEAENAIEKEVVEP 480 
WD40-rpts                                                                                      

Query      481 KAEEKKVKEEDVKAVAEEKKEEKKPGKLPMKIEKLEKPVDTKSENHELKKVLDDKERALLVESEIKNTAEETKPKVESFK 560 
WD40-rpts                                                                                      

Query      561 SEETTVAIDDMPALEKEESAEKKETTGEPTTTEAAVETTEASETPKPEAKPELLSNLEDVLTLTTPETETIEGSGEREEP 640 
WD40-rpts                                                                                      

Query      641 TTSAPAAEATSEITLLKSSSDVAVIENVKRIRPRTEQTHCQQYASCWQTVLDYEQQCDRKYSTEVLSHGIDDSEILNILH 720 
WD40-rpts                                                                                      

Query      721 NSSISHHEIVLKACLRPLDRSVHSTLKQLLVIQRGVRKACLELGRNKIAVTDSEEALCNTEIPSTAAIDEFISSEHVRSQ 800 
WD40-rpts                                                                                      

Query      801 SNHLTCRAKLEPIRETCSIVRNCCASVDTCDNYISSSPVKKLETEAIRRLVKKQNDCETKMLQTLSYIHEQLSNPSRRRR 880 
WD40-rpts                                                                                      

Query      881 FYYH 884 
WD40-rpts          

1 WD40-repeats found in QUERY=E01G4.6 (Len=884):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-119      4.10  283.87  0.00927       30.0%      3.43

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-119    MRIIACSLLIASLIPTVIGLKSNRTSCFHYVSCLEATEANLKQCAGGTAISLTLEAKDVNIRDLVKYRALEFVGCQDRLLKEVVDFESLQILVNEDARECFEKLPESSKRVEEFTDSCD

   WD40 Template    TG------------------ECLRTLSGHT--------------SGVTSVSFSPDGKRLV------------SG-------------S------ED----------GT------IKVWD