Input parameters:

  Query = D1081.10 (Len=394)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (D1081.10, Len=394):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKFLIILITLLLETICYDSKFRLSHRENEIRYGSCGEPMAEPLWLASLYTHDTYETKLSEMKKPPKSRYSQVHTTTPIDK 80  
WD40-rpts                                                                                      

Query       81 SPLTTQTSTQVSVNTSSDSSKTSDNSTVSTGTAVTETPTKKREITTEIPPTNAVFISQTHVLTSSSWFIKWKKSKHTERS 160 
WD40-rpts                    (__________________WD 1__________________)                        

Query      161 KSDSSQEKESGKWTWKSDETPVNSSICETDRSANYHTNGMNFRVLDSRQQWKKVEEIHFLRYCEFVTSQVGFLTLLVVNR 240 
WD40-rpts                                                                                      

Query      241 SVMSVPVTKIKYAWIEQECLETREITPLSIRIFFFTNGESCIFIRGAPLVKPDSFDIDRLIGIGVLESTETLKLFRFHLV 320 
WD40-rpts                                                                                      

Query      321 HEYMDEMCKIMGICRRKMRIIGHTPNANDKYVKETQDDDYVNTIEEPEILDYRRQSSNFYIILIFGLAFLEYLL 394 
WD40-rpts                                                                                

1 WD40-repeats found in QUERY=D1081.10 (Len=394):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    95-136      2.77  228.99  0.04989       22.5%     22.36

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   95-136    TSSDSSKTSDNSTVSTGTAVTETPTKKREITTEIPPTNAVFI

   WD40 Template    TGECLRTLSGHTSGVTS--VSFSPDGKRLVSGSEDGTIKVWD