Input parameters:

  Query = C45E1.4 (Len=158)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (C45E1.4, Len=158):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSSLGTYFFLLLVLLLPVCATCYEEDYRPEEGLTGHNGVFQALPWTKFELNLISSLHATANYPEVMRLVREKMIISDIAP 80  
WD40-rpts      (____________________________________________________________________________WD 

Query       81 NDRRKIERMLKNLRPPPVFDEFLTEDETEKVQKAHSERDVDSVLMVIGKKLQQMPNFLRDQAINYLTKHTPTVQPPEY 158 
WD40-rpts      1___________________________________________________________________________) 

1 WD40-repeats found in QUERY=C45E1.4 (Len=158):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-157      3.06  241.15  0.03447       20.0%     -7.00

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-157    MSSLGTYFFLLLVLLLPVCATCYEEDYRPEEGLTGHNGVFQALPWTKFELNLISSLHATANYPEVMRLVREKMIISDIAPNDRRKIERMLKNLRPPPVFDEFLTEDETEKVQKAHSERDVDSVLMVIGKKLQQMPNFLRDQAINYLTKHTPTVQPPE

   WD40 Template    TGEC-------------------------LRTLSGHTSGVTSVSF---------------S------------------PDG------------KRLV---SGSE-------------D-------------------------------GTIKVWD