Input parameters:

  Query = AT5G37415.2 (Len=237)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT5G37415.2, Len=237):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRDPDIVQNTRSLILLRVLTHEKLIQSHRYFFVGWIHKNLSRFRRKIRRRFLHCDFSGFGFFPRRFLFGFVLEKMACVIY 80  
WD40-rpts      (___________________________________________WD 1________________________________

Query       81 YGPDGELKTWPKEREKVEDIALRYSQLNEALRRKKSVTLYDFLNKKKDKTNLEKKAMITDNDDLKTCLKNVNVLKSPIAD 160 
WD40-rpts      __________)                                                                     

Query      161 HYFNDQISQLIQSLEPHVSKVQERIRFVESQKHKETKLDHQSLASIYSLNQSLNPSQFTLFLYNHGDNTMSQIPVTA 237 
WD40-rpts                                                                                   

1 WD40-repeats found in QUERY=AT5G37415.2 (Len=237):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-91       3.00  238.69  0.03715       25.0%     14.32

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-91     MRDPDIVQNTRSLILLRVLTHEKLIQSHRYFFVGWIHKNLSRFRRKIRRRFLHCDFSGFGFFPRRFLFGFVLEKMACVIYYGPDGELKTWP

   WD40 Template    TGE-----------CLRTLS----------GHTSGVTSV---------------SFSPDGKR---------------LVSGSEDGTIKVWD