Input parameters:

  Query = AT5G14600.1 (Len=318)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT5G14600.1, Len=318):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLPTESKKAFSFKRCIEDGDLVIVYERHDVMKPVKVSKDGVLQNRFGVYKHSDWIGKPLGTKVFSNKGKFVYLLAPTPEL 80  
WD40-rpts                                                                        (_____________

Query       81 WTLVLSHRTQILYIADISFVVMYLEVVPGCVVLESGTGSGSLSTSLARAVAPTGHVYSFDFHEQRAVSAREDFEKTGISS 160 
WD40-rpts      ____________________WD 1_________________________________)                      

Query      161 LVTVEVRDIQGEGFPEKLSGLADSVFLDLPQPWLAVPSAAKMLKQDGVLCSFSPCIEQVQRTCEVLRSDFIEIRTFEVLL 240 
WD40-rpts                                                                                      

Query      241 RTYEVKEVKMDTSSMVGESHEEDNEGMRPCKRKHRSNENDTVSQDNSSNASSVVMARPCSEARGHTGYLTFARLQCLA 318 
WD40-rpts                                                                                    

1 WD40-repeats found in QUERY=AT5G14600.1 (Len=318):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6    67-138      3.25  248.86  0.02723       25.0%     30.29

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   67-138    KGKFVYLLAPTPELWTLVLSHRTQILYIADISFVVMYLEVVPGCVVLESGTGSGSLSTSLARAVAPTGHVYS

   WD40 Template    TGECLRTLSGH-----------TSGVTS---------VSFSPDGKRLVSGSEDG------------TIKVWD