Input parameters:

  Query = AT5G10140.2 (Len=167)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT5G10140.2, Len=167):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHADDLKA 80  
WD40-rpts      (________________________________________________WD 1___________________________

Query       81 LDHQSKALNYGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVL 160 
WD40-rpts      _____________________)                                                          

Query      161 ASQIFLG 167 
WD40-rpts             

1 WD40-repeats found in QUERY=AT5G10140.2 (Len=167):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-102      2.89  234.07  0.04277       22.5%     16.67

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-102    MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHADDLKALDHQSKALNYGSHYELLELVDS

   WD40 Template    TGECLR-------------TL----SG-----------HTSGVTSVSFSPDGKRLVSGSEDG-----------TIK-----VW------------------D