Input parameters:

  Query = AT4G37930.1 (Len=517)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT4G37930.1, Len=517):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAMAMALRRLSSSIDKPIRPLIRSTSCYMSSLPSEAVDEKERSRVTWPKQLNAPLEEVDPEIADIIEHEKARQWKGLELI 80  
WD40-rpts                                                                                      

Query       81 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTAL 160 
WD40-rpts                                                                                      

Query      161 LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAYARLYDY 240 
WD40-rpts                                                                                      

Query      241 ARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVLYDFEDKI 320 
WD40-rpts               (____________________________________________________________________WD

Query      321 NQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSR 400 
WD40-rpts       1___________________________________________________________________)          

Query      401 VEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAME 480 
WD40-rpts                                                                                      

Query      481 SSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517 
WD40-rpts                                           

1 WD40-repeats found in QUERY=AT4G37930.1 (Len=517):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   250-390      2.98  237.94  0.03801       22.5%     33.41

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  250-390    QKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVN

   WD40 Template    TGECLRT-------------------------------LSGHTSGVTSVSFSP-----DGK-----------------------------------------------------------------RLVSGSEDGTIKVWD