Input parameters:

  Query = AT4G26910.3 (Len=365)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT4G26910.3, Len=365):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGESITDGTLATFLKKPGERVQADEAIAQIETDKVTIDIASPASGVIQEFLVNEGDTVEPGTKVAIISKSEDTASQVTPS 80  
WD40-rpts                                     (_________________WD 1_________________)         

Query       81 QKIPETTDTKPSPPAEDKQKPRVESAPVAEKPKAPSSPPPPKQSAKEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFA 160 
WD40-rpts                                                                                      

Query      161 LLTTFNEVDMTNLMKLRSQYKDAFYEKHGVKLGLMSGFIKAAVSALQHQPVVNAVIDGDDIIYRDYVDISIAVGTSKGLV 240 
WD40-rpts                                                                                      

Query      241 VPVIRGADKMNFAEIEKTINSLAKKANEGTISIDEMAGGSFTVSNGGVYGSLISTPIINPPQSAILGMHSIVSRPMVVGG 320 
WD40-rpts                                                                                      

Query      321 SVVPRPMMYVALTYDHRLIDGREAVYFLRRVKDVVEDPQRLLLDI 365 
WD40-rpts                                                   

1 WD40-repeats found in QUERY=AT4G26910.3 (Len=365):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    32-71       2.88  233.51  0.04350       17.5%     14.81

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   32-71     TDKVTIDIASPASGVIQEFLVNEGDTVEPGTKVAIISKSE

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD