Input parameters:

  Query = AT4G24370.1 (Len=164)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT4G24370.1, Len=164):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRRGGKEEDEVEQLLQAAQDEMILKLSVDSHTSRSSSDYLDPDLHSRFLALKSQKKKDQQQQQKQRPRMQPKSKDVVEET 80  
WD40-rpts      (______________________________________________WD 1_____________________________

Query       81 PEDLMLRFAALKTSLPSASSSSSVLLQDEIGEDGDEIGEDAEVDKLIQWAIDAARLDPSPSSDDEQSQNCDSDDENDSTR 160 
WD40-rpts      ________________)                                                               

Query      161 DVKP 164 
WD40-rpts          

1 WD40-repeats found in QUERY=AT4G24370.1 (Len=164):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-97       2.90  234.44  0.04229       20.0%     -7.86

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-97     MRRGGKEEDEVEQLLQAAQDEMILKLSVDSHTSRSSSDYLDPDLHSRFLALKSQKKKDQQQQQKQRPRMQPKSKDVVEETPEDLMLRFAALKTSLPS

   WD40 Template    TGECLRT--------------------LSGHTSGVTSVSFSPDG-----------KR--------------LVSGSEDGT------------IKVWD