Input parameters:

  Query = AT4G14465.1 (Len=281)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT4G14465.1, Len=281):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MANPWWTNQSGLAGMVDHSVSSGHHQNHHHQSLLTKGDLGIAMNQSQDNDQDEEDDPREGAVEVVNRRPRGRPPGSKNKP 80  
WD40-rpts                                                                                      

Query       81 KAPIFVTRDSPNALRSHVLEISDGSDVADTIAHFSRRRQRGVCVLSGTGSVANVTLRQAAAPGGVVSLQGRFEILSLTGA 160 
WD40-rpts                                                                                   (__

Query      161 FLPGPSPPGSTGLTVYLAGVQGQVVGGSVVGPLLAIGSVMVIAATFSNATYERLPMEEEEDGGGSRQIHGGGDSPPRIGS 240 
WD40-rpts      _______________WD 1_________________)                                           

Query      241 NLPDLSGMAGPGYNMPPHLIPNGAGQLGHEPYTWVHARPPY 281 
WD40-rpts                                               

1 WD40-repeats found in QUERY=AT4G14465.1 (Len=281):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   158-197      2.89  234.12  0.04269       25.0%     23.53

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  158-197    TGAFLPGPSPPGSTGLTVYLAGVQGQVVGGSVVGPLLAIG

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD