Input parameters:

  Query = AT3G14150.2 (Len=363)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT3G14150.2, Len=363):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDQIVNVDEFQELAKQALPKMYYDFYNGGAEDQHTLNENVQAFRRIMFRPRVLVDVSKIDMSTKILGYPISAPIMIAPTG 80  
WD40-rpts                                                                                      

Query       81 NHKLAHPEGETATAKAAAACNTIMIVSYMSSCTFEEIASSCNAVRFLQIYVYKRRDITAQVVKRAEKAGFKAIVLTVDVP 160 
WD40-rpts                                                                                      

Query      161 RLGRREADIKNKMISPQLKNFEGLFSTEVRPSKGSGVQAFASRAFDASFSWKDIEWLRSITELPILVKGILTREDALKAV 240 
WD40-rpts                                                                 (____________________

Query      241 EAGVDGIIVSNHGGRQLDYSPATITVLEEVVQVVRGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIIYGLAAKGEDG 320 
WD40-rpts      _________WD 1____________________________)                                      

Query      321 VKKVIDMLKNEFEITMALSGCPTIDDITRNHVRTENERLHSML 363 
WD40-rpts                                                 

1 WD40-repeats found in QUERY=AT3G14150.2 (Len=363):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   220-282      3.29  250.48  0.02591       27.5%     16.69

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  220-282    ITELPILVKGILTREDALKAVEAGVDGIIVSNHGGRQLDYSPATITVLEEVVQVVRGRIPVLL

   WD40 Template    TGECLRTLSGHTS----------GVTSVSFSPDGKRLVSGSED-------------GTIKVWD