Input parameters:

  Query = AT2G33870.1 (Len=218)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT2G33870.1, Len=218):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQERYRAITS 80  
WD40-rpts                                                     (_____________________WD 1_______

Query       81 AYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEA 160 
WD40-rpts      _____________)                                                                  

Query      161 INVENAFTEVLTQIYRVVSKKALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218 
WD40-rpts                                                                

1 WD40-repeats found in QUERY=AT2G33870.1 (Len=218):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    48-94       2.87  233.39  0.04365       15.0%     30.73

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   48-94     VEFATRSIQVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGS-------EDGTIKVWD