Input parameters:

  Query = AT2G06904.1 (Len=217)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT2G06904.1, Len=217):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPLKRSRGRESVEEEGRSLDLPSRRYDLRERVRGIAAMPERIIREDVQIRDGMMIDSDCEDDFVITGVRTVEQKLASEGH 80  
WD40-rpts                    (________________________WD 1________________________)            

Query       81 EIVMVHDYVSVSSKSSASPSFALSLYSPISYESDPKEDQDPPISPYVPEAVDHSPDSPFALLWEGTSPILRFEADMRADA 160 
WD40-rpts                                                                                      

Query      161 IPTFDGGFTSGIKILFCFICGEDGHYPQDCQFYTQYIPWPLLVSTVESMSIMRLPVC 217 
WD40-rpts                                                               

1 WD40-repeats found in QUERY=AT2G06904.1 (Len=217):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    15-68       2.87  233.20  0.04391       25.0%      9.55

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   15-68     EGRSLDLPSRRYDLRERVRGIAAMPERIIREDVQIRDGMMIDSDCEDDFVITGV

   WD40 Template    TGECLRTLSGHTS---GVTSVSFSP-----------DGKRLVSGSEDGTIKVWD