Input parameters:

  Query = AT2G03710.3 (Len=187)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT2G03710.3, Len=187):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMD 80  
WD40-rpts      (_____________________________________WD 1_____________________________________)

Query       81 PNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEM 160 
WD40-rpts                                                                                      

Query      161 LLETNRDLRRKVAIGIFYRKKLKPFVI 187 
WD40-rpts                                 

1 WD40-repeats found in QUERY=AT2G03710.3 (Len=187):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-80       2.86  232.60  0.04472       20.0%     10.93

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-80     MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMD

   WD40 Template    TGECLR-----------TL------SG-----------HTSGVTSVSFSPDGKRLVSGSEDGT------------IKVWD