Input parameters:

  Query = AT1G75140.1 (Len=617)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT1G75140.1, Len=617):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADSQNGKSAFFFFFVSLILLFLSPSYSDVTASESDPIPYENSDASPGVVTSSESDRQGVSLHRLEELVRNLTELVARLD 80  
WD40-rpts                                                                                      

Query       81 AKLSETPFKVKKEITRDEIEEKAKAFSVTKYSPFWSERFEFTSAVKLDSEATCINVLPFRDHEGLSKYFAVGDSSGRVFV 160 
WD40-rpts                                                                                      

Query      161 FLRNGDVLVEFFTTCDSPITAMVSYMSVYKNESFVVTGHQSGVILLHRLREGSIGEDLNSAVMENVGKFDGTEDGLQVTL 240 
WD40-rpts         (____________________WD 1___________________)                                

Query      241 LEVHHVGRVRYILATDLSGKLTVFTENRTVYGSVSPTSRPLVFLKQRLLFLTETGAGSLDLRSMKIRESECEGLNHSLAR 320 
WD40-rpts                                                                                      

Query      321 SYVFDASERAKAYGFTSEGEIIHVLLLGDIMNFKCRVRSKKKVQMEEPVALQAIKGYLLIVNQEKVFVYNVSTQHYVRTT 400 
WD40-rpts                                                                                      

Query      401 GPRLLFPAALEDIRSTFLSHRESTKTTDHQKLEKVTPLIASDREKLLVMGLGDGYVATYKSKLPISKAEFNTMLWSSPVF 480 
WD40-rpts                                                                                      

Query      481 FFILFLFGAWHFFSKKKESLTAWGPDDPFSSTTMSSSSTTTAQNSSAFSESTRRNDDHMDLRRRYVSPSRYPPGAATGAY 560 
WD40-rpts                                                                                      

Query      561 RSVGSNDPSSRAPVETTNYRTTAQEMKYRGGSGLDSGGFGKRRESLFGNNKALDDES 617 
WD40-rpts                                                               

1 WD40-repeats found in QUERY=AT1G75140.1 (Len=617):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   164-208      3.36  253.36  0.02373       22.5%     28.62

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  164-208    NGDVL--VEFFTTCDSPITAMVSYMSVYKNESFVVTGHQSGVILLHR

   WD40 Template    TGECLRTLSGHTSGVTS----V---SFSPDGKRLVSGSEDGTIKVWD