Input parameters:

  Query = AT1G34750.1 (Len=282)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT1G34750.1, Len=282):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAKLCCFGSSDYDLVVGRASTSSGKGRNNDGEIKFGYSLVKGKANHPMEDYHVSKFVKIDGNELGLFAIYDGHLGERVPA 80  
WD40-rpts                                                                                      

Query       81 YLQKHLFSNILKEEQFRYDPQRSIIAAYEKTDQAILSHSSDLGRGGSTAVTAILMNGRRLWVANVGDSRAVLSQGGQAIQ 160 
WD40-rpts                                                                                (_____

Query      161 MTIDHEPHTERLSIEGKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKTHLRSDPDVKDSSIDDHTDVLVLASDGLWKVMA 240 
WD40-rpts      _________________WD 1_____________________)                                     

Query      241 NQEAIDIARRIKDPLKAAKELTTEALRRDSKDDISCIVVRLR 282 
WD40-rpts                                                

1 WD40-repeats found in QUERY=AT1G34750.1 (Len=282):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   155-203      3.22  247.48  0.02841       20.0%      9.92

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  155-203    GGQAIQMTIDHEPHTERLSIEGKGGFVSNMPGDVPRVNGQLAVSRAFGD

   WD40 Template    TGECLRTLSGHTSG---------VTSVSFSPDGKRLVSGSEDGTIKVWD