co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G66680

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080056: petal vascular tissue pattern formation	0.00E+00
2	GO:0045047: protein targeting to ER	0.00E+00
3	GO:0031564: transcription antitermination	0.00E+00
4	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
5	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
6	GO:0019307: mannose biosynthetic process	0.00E+00
7	GO:0006042: glucosamine biosynthetic process	0.00E+00
8	GO:1901137: carbohydrate derivative biosynthetic process	0.00E+00
9	GO:0046686: response to cadmium ion	5.08E-09
10	GO:0018279: protein N-linked glycosylation via asparagine	2.73E-06
11	GO:0071586: CAAX-box protein processing	3.64E-05
12	GO:0006422: aspartyl-tRNA aminoacylation	3.64E-05
13	GO:0043687: post-translational protein modification	3.64E-05
14	GO:0051775: response to redox state	3.64E-05
15	GO:0080120: CAAX-box protein maturation	3.64E-05
16	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	3.64E-05
17	GO:0006487: protein N-linked glycosylation	7.86E-05
18	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	9.09E-05
19	GO:0007051: spindle organization	9.09E-05
20	GO:0006013: mannose metabolic process	1.58E-04
21	GO:0055074: calcium ion homeostasis	1.58E-04
22	GO:0009651: response to salt stress	1.59E-04
23	GO:0007276: gamete generation	2.33E-04
24	GO:0006168: adenine salvage	2.33E-04
25	GO:0009298: GDP-mannose biosynthetic process	2.33E-04
26	GO:0006166: purine ribonucleoside salvage	2.33E-04
27	GO:0010483: pollen tube reception	3.14E-04
28	GO:0044209: AMP salvage	4.01E-04
29	GO:0045116: protein neddylation	4.01E-04
30	GO:0006405: RNA export from nucleus	4.01E-04
31	GO:0000060: protein import into nucleus, translocation	4.92E-04
32	GO:0047484: regulation of response to osmotic stress	4.92E-04
33	GO:0006099: tricarboxylic acid cycle	5.29E-04
34	GO:0009423: chorismate biosynthetic process	5.88E-04
35	GO:0009744: response to sucrose	6.47E-04
36	GO:0000082: G1/S transition of mitotic cell cycle	6.87E-04
37	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	6.87E-04
38	GO:0009690: cytokinin metabolic process	7.90E-04
39	GO:0006605: protein targeting	7.90E-04
40	GO:0006102: isocitrate metabolic process	7.90E-04
41	GO:0009846: pollen germination	8.04E-04
42	GO:0015031: protein transport	8.86E-04
43	GO:0098656: anion transmembrane transport	1.01E-03
44	GO:0009073: aromatic amino acid family biosynthetic process	1.36E-03
45	GO:0006820: anion transport	1.49E-03
46	GO:0010588: cotyledon vascular tissue pattern formation	1.62E-03
47	GO:0006094: gluconeogenesis	1.62E-03
48	GO:0019853: L-ascorbic acid biosynthetic process	1.89E-03
49	GO:0009116: nucleoside metabolic process	2.18E-03
50	GO:0051302: regulation of cell division	2.33E-03
51	GO:0007131: reciprocal meiotic recombination	2.64E-03
52	GO:0009306: protein secretion	2.96E-03
53	GO:0051028: mRNA transport	3.13E-03
54	GO:0042254: ribosome biogenesis	3.19E-03
55	GO:0000413: protein peptidyl-prolyl isomerization	3.30E-03
56	GO:0006606: protein import into nucleus	3.30E-03
57	GO:0010154: fruit development	3.47E-03
58	GO:0010305: leaf vascular tissue pattern formation	3.47E-03
59	GO:0010252: auxin homeostasis	4.56E-03
60	GO:0006886: intracellular protein transport	4.77E-03
61	GO:0048364: root development	5.94E-03
62	GO:0009631: cold acclimation	6.83E-03
63	GO:0010043: response to zinc ion	6.83E-03
64	GO:0042542: response to hydrogen peroxide	8.44E-03
65	GO:0042546: cell wall biogenesis	8.93E-03
66	GO:0009965: leaf morphogenesis	9.42E-03
67	GO:0006364: rRNA processing	1.07E-02
68	GO:0051603: proteolysis involved in cellular protein catabolic process	1.10E-02
69	GO:0006096: glycolytic process	1.20E-02
70	GO:0048316: seed development	1.23E-02
71	GO:0048367: shoot system development	1.23E-02
72	GO:0006457: protein folding	1.31E-02
73	GO:0006511: ubiquitin-dependent protein catabolic process	1.37E-02
74	GO:0009845: seed germination	1.70E-02
75	GO:0009790: embryo development	1.80E-02
76	GO:0006413: translational initiation	1.92E-02
77	GO:0009414: response to water deprivation	2.00E-02
78	GO:0007623: circadian rhythm	2.02E-02
79	GO:0006979: response to oxidative stress	2.07E-02
80	GO:0009617: response to bacterium	2.29E-02
81	GO:0006970: response to osmotic stress	2.91E-02
82	GO:0048366: leaf development	3.10E-02
83	GO:0016192: vesicle-mediated transport	3.34E-02
84	GO:0045454: cell redox homeostasis	3.66E-02
85	GO:0032259: methylation	4.12E-02
86	GO:0006281: DNA repair	4.25E-02
87	GO:0009408: response to heat	4.25E-02

Rank	GO Term	Adjusted P value
1	GO:0004615: phosphomannomutase activity	0.00E+00
2	GO:0004164: diphthine synthase activity	0.00E+00
3	GO:0004107: chorismate synthase activity	0.00E+00
4	GO:0001072: transcription antitermination factor activity, RNA binding	0.00E+00
5	GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity	0.00E+00
6	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.73E-06
7	GO:0097367: carbohydrate derivative binding	3.64E-05
8	GO:0004815: aspartate-tRNA ligase activity	3.64E-05
9	GO:0015157: oligosaccharide transmembrane transporter activity	3.64E-05
10	GO:0048037: cofactor binding	3.64E-05
11	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	3.64E-05
12	GO:0008805: carbon-monoxide oxygenase activity	9.09E-05
13	GO:0004775: succinate-CoA ligase (ADP-forming) activity	9.09E-05
14	GO:0004776: succinate-CoA ligase (GDP-forming) activity	9.09E-05
15	GO:0019781: NEDD8 activating enzyme activity	9.09E-05
16	GO:0043021: ribonucleoprotein complex binding	9.09E-05
17	GO:0004148: dihydrolipoyl dehydrogenase activity	1.58E-04
18	GO:0000166: nucleotide binding	2.03E-04
19	GO:0004449: isocitrate dehydrogenase (NAD+) activity	2.33E-04
20	GO:0003999: adenine phosphoribosyltransferase activity	2.33E-04
21	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	2.33E-04
22	GO:0004576: oligosaccharyl transferase activity	3.14E-04
23	GO:0005507: copper ion binding	3.59E-04
24	GO:0008641: small protein activating enzyme activity	4.01E-04
25	GO:0031369: translation initiation factor binding	4.92E-04
26	GO:0003697: single-stranded DNA binding	5.07E-04
27	GO:0008121: ubiquinol-cytochrome-c reductase activity	6.87E-04
28	GO:0008320: protein transmembrane transporter activity	6.87E-04
29	GO:0051287: NAD binding	7.77E-04
30	GO:0015288: porin activity	7.90E-04
31	GO:0008308: voltage-gated anion channel activity	8.97E-04
32	GO:0004175: endopeptidase activity	1.76E-03
33	GO:0004190: aspartic-type endopeptidase activity	1.89E-03
34	GO:0004298: threonine-type endopeptidase activity	2.48E-03
35	GO:0008536: Ran GTPase binding	3.47E-03
36	GO:0010181: FMN binding	3.64E-03
37	GO:0008483: transaminase activity	4.75E-03
38	GO:0003729: mRNA binding	6.00E-03
39	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	6.18E-03
40	GO:0005096: GTPase activator activity	6.39E-03
41	GO:0004222: metalloendopeptidase activity	6.61E-03
42	GO:0050897: cobalt ion binding	6.83E-03
43	GO:0003746: translation elongation factor activity	7.28E-03
44	GO:0050661: NADP binding	7.97E-03
45	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	9.68E-03
46	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.07E-02
47	GO:0003690: double-stranded DNA binding	1.10E-02
48	GO:0004650: polygalacturonase activity	1.29E-02
49	GO:0051082: unfolded protein binding	1.37E-02
50	GO:0016829: lyase activity	1.70E-02
51	GO:0008565: protein transporter activity	1.83E-02
52	GO:0003743: translation initiation factor activity	2.26E-02
53	GO:0008168: methyltransferase activity	2.69E-02
54	GO:0000287: magnesium ion binding	2.72E-02
55	GO:0050660: flavin adenine dinucleotide binding	3.06E-02
56	GO:0008233: peptidase activity	3.18E-02
57	GO:0003924: GTPase activity	4.25E-02

Rank	GO Term	Adjusted P value
1	GO:0005829: cytosol	2.65E-06
2	GO:0008250: oligosaccharyltransferase complex	2.73E-06
3	GO:0005783: endoplasmic reticulum	2.95E-06
4	GO:0071541: eukaryotic translation initiation factor 3 complex, eIF3m	3.64E-05
5	GO:0070545: PeBoW complex	9.09E-05
6	GO:0030134: ER to Golgi transport vesicle	9.09E-05
7	GO:0030660: Golgi-associated vesicle membrane	3.14E-04
8	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	3.14E-04
9	GO:0032588: trans-Golgi network membrane	4.92E-04
10	GO:0030687: preribosome, large subunit precursor	6.87E-04
11	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	7.90E-04
12	GO:0046930: pore complex	8.97E-04
13	GO:0031901: early endosome membrane	1.01E-03
14	GO:0005740: mitochondrial envelope	1.24E-03
15	GO:0005765: lysosomal membrane	1.36E-03
16	GO:0005852: eukaryotic translation initiation factor 3 complex	1.36E-03
17	GO:0005750: mitochondrial respiratory chain complex III	1.76E-03
18	GO:0030176: integral component of endoplasmic reticulum membrane	1.89E-03
19	GO:0005839: proteasome core complex	2.48E-03
20	GO:0005741: mitochondrial outer membrane	2.48E-03
21	GO:0005774: vacuolar membrane	4.01E-03
22	GO:0009507: chloroplast	4.47E-03
23	GO:0032580: Golgi cisterna membrane	4.56E-03
24	GO:0005788: endoplasmic reticulum lumen	5.35E-03
25	GO:0005737: cytoplasm	5.45E-03
26	GO:0005643: nuclear pore	6.18E-03
27	GO:0005773: vacuole	7.66E-03
28	GO:0022626: cytosolic ribosome	9.66E-03
29	GO:0000502: proteasome complex	1.07E-02
30	GO:0005747: mitochondrial respiratory chain complex I	1.23E-02
31	GO:0005834: heterotrimeric G-protein complex	1.26E-02
32	GO:0005794: Golgi apparatus	1.54E-02
33	GO:0005623: cell	1.64E-02
34	GO:0048046: apoplast	1.86E-02
35	GO:0005759: mitochondrial matrix	1.89E-02
36	GO:0009536: plastid	2.52E-02
37	GO:0009505: plant-type cell wall	2.57E-02
38	GO:0005886: plasma membrane	2.59E-02
39	GO:0009506: plasmodesma	3.01E-02
40	GO:0005789: endoplasmic reticulum membrane	3.14E-02
41	GO:0022625: cytosolic large ribosomal subunit	3.34E-02
42	GO:0005730: nucleolus	3.47E-02
43	GO:0016020: membrane	3.82E-02