co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G66010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
2	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
3	GO:0000731: DNA synthesis involved in DNA repair	0.00E+00
4	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
5	GO:0048194: Golgi vesicle budding	6.65E-06
6	GO:0006886: intracellular protein transport	1.12E-05
7	GO:0042742: defense response to bacterium	7.30E-05
8	GO:0009819: drought recovery	7.70E-05
9	GO:1902265: abscisic acid homeostasis	1.22E-04
10	GO:0006680: glucosylceramide catabolic process	1.22E-04
11	GO:0031338: regulation of vesicle fusion	1.22E-04
12	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	1.22E-04
13	GO:0015969: guanosine tetraphosphate metabolic process	1.22E-04
14	GO:0010941: regulation of cell death	1.22E-04
15	GO:0030010: establishment of cell polarity	2.82E-04
16	GO:2000072: regulation of defense response to fungus, incompatible interaction	2.82E-04
17	GO:0050684: regulation of mRNA processing	2.82E-04
18	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	4.65E-04
19	GO:0006556: S-adenosylmethionine biosynthetic process	4.65E-04
20	GO:0032784: regulation of DNA-templated transcription, elongation	4.65E-04
21	GO:0061158: 3'-UTR-mediated mRNA destabilization	4.65E-04
22	GO:0090630: activation of GTPase activity	4.65E-04
23	GO:0010200: response to chitin	5.93E-04
24	GO:0046777: protein autophosphorylation	6.24E-04
25	GO:0010104: regulation of ethylene-activated signaling pathway	6.66E-04
26	GO:0072583: clathrin-dependent endocytosis	6.66E-04
27	GO:0070301: cellular response to hydrogen peroxide	6.66E-04
28	GO:0010508: positive regulation of autophagy	8.84E-04
29	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	8.84E-04
30	GO:0009687: abscisic acid metabolic process	8.84E-04
31	GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly	8.84E-04
32	GO:0060548: negative regulation of cell death	8.84E-04
33	GO:0006623: protein targeting to vacuole	9.36E-04
34	GO:0006468: protein phosphorylation	9.62E-04
35	GO:0009790: embryo development	1.18E-03
36	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.37E-03
37	GO:1900425: negative regulation of defense response to bacterium	1.37E-03
38	GO:0043966: histone H3 acetylation	1.64E-03
39	GO:0010555: response to mannitol	1.64E-03
40	GO:2000067: regulation of root morphogenesis	1.64E-03
41	GO:0048573: photoperiodism, flowering	1.67E-03
42	GO:0007166: cell surface receptor signaling pathway	1.72E-03
43	GO:0070370: cellular heat acclimation	1.92E-03
44	GO:0015937: coenzyme A biosynthetic process	1.92E-03
45	GO:0009610: response to symbiotic fungus	1.92E-03
46	GO:0043068: positive regulation of programmed cell death	2.22E-03
47	GO:0009867: jasmonic acid mediated signaling pathway	2.33E-03
48	GO:0007186: G-protein coupled receptor signaling pathway	2.54E-03
49	GO:0006261: DNA-dependent DNA replication	2.54E-03
50	GO:0010120: camalexin biosynthetic process	2.54E-03
51	GO:0030968: endoplasmic reticulum unfolded protein response	2.54E-03
52	GO:0006002: fructose 6-phosphate metabolic process	2.54E-03
53	GO:0009880: embryonic pattern specification	2.54E-03
54	GO:0006970: response to osmotic stress	2.78E-03
55	GO:0090333: regulation of stomatal closure	2.87E-03
56	GO:0042761: very long-chain fatty acid biosynthetic process	3.21E-03
57	GO:0008202: steroid metabolic process	3.21E-03
58	GO:0043069: negative regulation of programmed cell death	3.57E-03
59	GO:0010072: primary shoot apical meristem specification	3.94E-03
60	GO:0006352: DNA-templated transcription, initiation	3.94E-03
61	GO:0009750: response to fructose	3.94E-03
62	GO:0009736: cytokinin-activated signaling pathway	4.02E-03
63	GO:0010102: lateral root morphogenesis	4.71E-03
64	GO:0034605: cellular response to heat	5.12E-03
65	GO:0010030: positive regulation of seed germination	5.54E-03
66	GO:0010053: root epidermal cell differentiation	5.54E-03
67	GO:0042343: indole glucosinolate metabolic process	5.54E-03
68	GO:0010187: negative regulation of seed germination	6.42E-03
69	GO:0006355: regulation of transcription, DNA-templated	6.49E-03
70	GO:0016575: histone deacetylation	6.87E-03
71	GO:0098542: defense response to other organism	7.34E-03
72	GO:0061077: chaperone-mediated protein folding	7.34E-03
73	GO:0006730: one-carbon metabolic process	7.81E-03
74	GO:0031348: negative regulation of defense response	7.81E-03
75	GO:0009693: ethylene biosynthetic process	8.30E-03
76	GO:0071215: cellular response to abscisic acid stimulus	8.30E-03
77	GO:0042147: retrograde transport, endosome to Golgi	9.31E-03
78	GO:0042391: regulation of membrane potential	9.83E-03
79	GO:0042631: cellular response to water deprivation	9.83E-03
80	GO:0010197: polar nucleus fusion	1.04E-02
81	GO:0048544: recognition of pollen	1.09E-02
82	GO:0009409: response to cold	1.11E-02
83	GO:0009749: response to glucose	1.15E-02
84	GO:0009617: response to bacterium	1.18E-02
85	GO:0002229: defense response to oomycetes	1.20E-02
86	GO:0000302: response to reactive oxygen species	1.20E-02
87	GO:0006891: intra-Golgi vesicle-mediated transport	1.20E-02
88	GO:0030163: protein catabolic process	1.32E-02
89	GO:0071281: cellular response to iron ion	1.32E-02
90	GO:0071805: potassium ion transmembrane transport	1.44E-02
91	GO:0051607: defense response to virus	1.50E-02
92	GO:0006351: transcription, DNA-templated	1.56E-02
93	GO:0009816: defense response to bacterium, incompatible interaction	1.62E-02
94	GO:0006950: response to stress	1.75E-02
95	GO:0006499: N-terminal protein myristoylation	2.02E-02
96	GO:0044550: secondary metabolite biosynthetic process	2.07E-02
97	GO:0048527: lateral root development	2.09E-02
98	GO:0045087: innate immune response	2.23E-02
99	GO:0006897: endocytosis	2.52E-02
100	GO:0006631: fatty acid metabolic process	2.52E-02
101	GO:0009744: response to sucrose	2.67E-02
102	GO:0009408: response to heat	2.81E-02
103	GO:0048364: root development	2.93E-02
104	GO:0006397: mRNA processing	2.93E-02
105	GO:0006260: DNA replication	3.06E-02
106	GO:0006952: defense response	3.28E-02
107	GO:0006813: potassium ion transport	3.30E-02
108	GO:0050832: defense response to fungus	3.56E-02
109	GO:0006096: glycolytic process	3.72E-02
110	GO:0006508: proteolysis	3.74E-02
111	GO:0048367: shoot system development	3.80E-02
112	GO:0009626: plant-type hypersensitive response	3.89E-02
113	GO:0009734: auxin-activated signaling pathway	3.94E-02
114	GO:0009624: response to nematode	4.24E-02
115	GO:0009651: response to salt stress	4.24E-02
116	GO:0006396: RNA processing	4.33E-02
117	GO:0009742: brassinosteroid mediated signaling pathway	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0005524: ATP binding	4.18E-08
2	GO:0016301: kinase activity	1.51E-06
3	GO:0004012: phospholipid-translocating ATPase activity	4.39E-05
4	GO:0070008: serine-type exopeptidase activity	1.22E-04
5	GO:0001102: RNA polymerase II activating transcription factor binding	1.22E-04
6	GO:0004348: glucosylceramidase activity	1.22E-04
7	GO:0032050: clathrin heavy chain binding	1.22E-04
8	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.65E-04
9	GO:0008728: GTP diphosphokinase activity	2.82E-04
10	GO:0004594: pantothenate kinase activity	2.82E-04
11	GO:0031683: G-protein beta/gamma-subunit complex binding	4.65E-04
12	GO:0004478: methionine adenosyltransferase activity	4.65E-04
13	GO:0001664: G-protein coupled receptor binding	4.65E-04
14	GO:0004416: hydroxyacylglutathione hydrolase activity	6.66E-04
15	GO:0004674: protein serine/threonine kinase activity	9.63E-04
16	GO:0017137: Rab GTPase binding	1.12E-03
17	GO:0010294: abscisic acid glucosyltransferase activity	1.12E-03
18	GO:0102391: decanoate--CoA ligase activity	1.64E-03
19	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.64E-03
20	GO:0003872: 6-phosphofructokinase activity	1.92E-03
21	GO:0004467: long-chain fatty acid-CoA ligase activity	1.92E-03
22	GO:0046982: protein heterodimerization activity	2.47E-03
23	GO:0008142: oxysterol binding	2.54E-03
24	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	2.54E-03
25	GO:0004713: protein tyrosine kinase activity	3.57E-03
26	GO:0004521: endoribonuclease activity	4.32E-03
27	GO:0017025: TBP-class protein binding	5.54E-03
28	GO:0004190: aspartic-type endopeptidase activity	5.54E-03
29	GO:0030552: cAMP binding	5.54E-03
30	GO:0030553: cGMP binding	5.54E-03
31	GO:0003887: DNA-directed DNA polymerase activity	5.98E-03
32	GO:0003954: NADH dehydrogenase activity	6.42E-03
33	GO:0004407: histone deacetylase activity	6.42E-03
34	GO:0005528: FK506 binding	6.42E-03
35	GO:0005216: ion channel activity	6.87E-03
36	GO:0015079: potassium ion transmembrane transporter activity	6.87E-03
37	GO:0043424: protein histidine kinase binding	6.87E-03
38	GO:0033612: receptor serine/threonine kinase binding	7.34E-03
39	GO:0008565: protein transporter activity	8.54E-03
40	GO:0003727: single-stranded RNA binding	8.80E-03
41	GO:0030551: cyclic nucleotide binding	9.83E-03
42	GO:0005249: voltage-gated potassium channel activity	9.83E-03
43	GO:0004402: histone acetyltransferase activity	9.83E-03
44	GO:0001085: RNA polymerase II transcription factor binding	1.04E-02
45	GO:0004672: protein kinase activity	1.25E-02
46	GO:0004197: cysteine-type endopeptidase activity	1.26E-02
47	GO:0000287: magnesium ion binding	1.50E-02
48	GO:0030246: carbohydrate binding	1.64E-02
49	GO:0005515: protein binding	1.66E-02
50	GO:0030247: polysaccharide binding	1.75E-02
51	GO:0008236: serine-type peptidase activity	1.82E-02
52	GO:0005516: calmodulin binding	1.89E-02
53	GO:0005096: GTPase activator activity	1.95E-02
54	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.09E-02
55	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.37E-02
56	GO:0042803: protein homodimerization activity	2.38E-02
57	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.46E-02
58	GO:0005198: structural molecule activity	2.90E-02
59	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.98E-02
60	GO:0008289: lipid binding	3.90E-02
61	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.98E-02
62	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.98E-02
63	GO:0016887: ATPase activity	4.33E-02
64	GO:0003729: mRNA binding	4.48E-02
65	GO:0000166: nucleotide binding	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	3.89E-08
2	GO:0043625: delta DNA polymerase complex	1.22E-04
3	GO:0017119: Golgi transport complex	1.71E-04
4	GO:0030125: clathrin vesicle coat	1.71E-04
5	GO:0000124: SAGA complex	2.82E-04
6	GO:0031304: intrinsic component of mitochondrial inner membrane	2.82E-04
7	GO:0031902: late endosome membrane	2.90E-04
8	GO:0042406: extrinsic component of endoplasmic reticulum membrane	4.65E-04
9	GO:0005945: 6-phosphofructokinase complex	1.12E-03
10	GO:0005802: trans-Golgi network	1.13E-03
11	GO:0030904: retromer complex	1.37E-03
12	GO:0016021: integral component of membrane	1.52E-03
13	GO:0016363: nuclear matrix	1.64E-03
14	GO:0005669: transcription factor TFIID complex	2.22E-03
15	GO:0030131: clathrin adaptor complex	2.22E-03
16	GO:0030665: clathrin-coated vesicle membrane	3.21E-03
17	GO:0005795: Golgi stack	5.54E-03
18	GO:0005905: clathrin-coated pit	7.34E-03
19	GO:0005887: integral component of plasma membrane	8.02E-03
20	GO:0005829: cytosol	8.61E-03
21	GO:0005789: endoplasmic reticulum membrane	1.33E-02
22	GO:0030529: intracellular ribonucleoprotein complex	1.56E-02
23	GO:0000932: P-body	1.56E-02
24	GO:0005667: transcription factor complex	1.69E-02
25	GO:0019005: SCF ubiquitin ligase complex	1.88E-02
26	GO:0005794: Golgi apparatus	1.98E-02
27	GO:0000786: nucleosome	2.16E-02
28	GO:0005622: intracellular	2.33E-02
29	GO:0005768: endosome	2.41E-02
30	GO:0005834: heterotrimeric G-protein complex	3.89E-02
31	GO:0000139: Golgi membrane	4.00E-02
32	GO:0012505: endomembrane system	4.15E-02
33	GO:0005783: endoplasmic reticulum	4.78E-02