Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G65670

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
2GO:0032780: negative regulation of ATPase activity0.00E+00
3GO:0006482: protein demethylation0.00E+00
4GO:0046292: formaldehyde metabolic process0.00E+00
5GO:0006069: ethanol oxidation0.00E+00
6GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
7GO:0048227: plasma membrane to endosome transport0.00E+00
8GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
9GO:0001881: receptor recycling0.00E+00
10GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly8.39E-07
11GO:0051788: response to misfolded protein2.28E-06
12GO:0055114: oxidation-reduction process5.63E-06
13GO:0043248: proteasome assembly8.18E-05
14GO:0030433: ubiquitin-dependent ERAD pathway8.75E-05
15GO:0006605: protein targeting1.91E-04
16GO:0007292: female gamete generation2.20E-04
17GO:0006805: xenobiotic metabolic process2.20E-04
18GO:0019628: urate catabolic process2.20E-04
19GO:0000303: response to superoxide2.20E-04
20GO:0080173: male-female gamete recognition during double fertilization2.20E-04
21GO:0006569: tryptophan catabolic process2.20E-04
22GO:1901183: positive regulation of camalexin biosynthetic process2.20E-04
23GO:0010265: SCF complex assembly2.20E-04
24GO:0034214: protein hexamerization2.20E-04
25GO:0006144: purine nucleobase metabolic process2.20E-04
26GO:0048455: stamen formation2.20E-04
27GO:0035266: meristem growth2.20E-04
28GO:0010120: camalexin biosynthetic process2.36E-04
29GO:0006464: cellular protein modification process2.79E-04
30GO:0046685: response to arsenic-containing substance2.86E-04
31GO:0046686: response to cadmium ion4.64E-04
32GO:1905182: positive regulation of urease activity4.90E-04
33GO:0019521: D-gluconate metabolic process4.90E-04
34GO:0019483: beta-alanine biosynthetic process4.90E-04
35GO:0015865: purine nucleotide transport4.90E-04
36GO:0006212: uracil catabolic process4.90E-04
37GO:0019374: galactolipid metabolic process4.90E-04
38GO:1902000: homogentisate catabolic process4.90E-04
39GO:0019441: tryptophan catabolic process to kynurenine4.90E-04
40GO:0097054: L-glutamate biosynthetic process4.90E-04
41GO:0031648: protein destabilization4.90E-04
42GO:0006979: response to oxidative stress6.02E-04
43GO:0007034: vacuolar transport6.76E-04
44GO:0009072: aromatic amino acid family metabolic process7.98E-04
45GO:0060968: regulation of gene silencing7.98E-04
46GO:0051211: anisotropic cell growth7.98E-04
47GO:1900055: regulation of leaf senescence7.98E-04
48GO:0010359: regulation of anion channel activity7.98E-04
49GO:0010498: proteasomal protein catabolic process7.98E-04
50GO:0008333: endosome to lysosome transport7.98E-04
51GO:0006631: fatty acid metabolic process8.36E-04
52GO:2000377: regulation of reactive oxygen species metabolic process9.27E-04
53GO:0006511: ubiquitin-dependent protein catabolic process9.65E-04
54GO:2001289: lipid X metabolic process1.14E-03
55GO:0006537: glutamate biosynthetic process1.14E-03
56GO:0046902: regulation of mitochondrial membrane permeability1.14E-03
57GO:0010255: glucose mediated signaling pathway1.14E-03
58GO:0006809: nitric oxide biosynthetic process1.14E-03
59GO:0001676: long-chain fatty acid metabolic process1.14E-03
60GO:0009873: ethylene-activated signaling pathway1.23E-03
61GO:0009809: lignin biosynthetic process1.34E-03
62GO:0051603: proteolysis involved in cellular protein catabolic process1.40E-03
63GO:1902584: positive regulation of response to water deprivation1.51E-03
64GO:0010363: regulation of plant-type hypersensitive response1.51E-03
65GO:0042991: transcription factor import into nucleus1.51E-03
66GO:0010188: response to microbial phytotoxin1.51E-03
67GO:0006878: cellular copper ion homeostasis1.51E-03
68GO:0032366: intracellular sterol transport1.51E-03
69GO:0006542: glutamine biosynthetic process1.51E-03
70GO:0019676: ammonia assimilation cycle1.51E-03
71GO:0030308: negative regulation of cell growth1.93E-03
72GO:0045927: positive regulation of growth1.93E-03
73GO:0006564: L-serine biosynthetic process1.93E-03
74GO:0010193: response to ozone2.23E-03
75GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation2.38E-03
76GO:0048232: male gamete generation2.38E-03
77GO:0070814: hydrogen sulfide biosynthetic process2.38E-03
78GO:1902456: regulation of stomatal opening2.38E-03
79GO:0010358: leaf shaping2.38E-03
80GO:0035435: phosphate ion transmembrane transport2.38E-03
81GO:0006014: D-ribose metabolic process2.38E-03
82GO:0006751: glutathione catabolic process2.38E-03
83GO:0048827: phyllome development2.38E-03
84GO:0045454: cell redox homeostasis2.61E-03
85GO:0034389: lipid particle organization2.86E-03
86GO:0006955: immune response3.36E-03
87GO:0046470: phosphatidylcholine metabolic process3.36E-03
88GO:0048528: post-embryonic root development3.36E-03
89GO:0043090: amino acid import3.36E-03
90GO:0080186: developmental vegetative growth3.36E-03
91GO:0006614: SRP-dependent cotranslational protein targeting to membrane3.36E-03
92GO:0050790: regulation of catalytic activity3.36E-03
93GO:0016559: peroxisome fission3.90E-03
94GO:0006644: phospholipid metabolic process3.90E-03
95GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.90E-03
96GO:0010078: maintenance of root meristem identity3.90E-03
97GO:0006102: isocitrate metabolic process3.90E-03
98GO:0010150: leaf senescence4.18E-03
99GO:0043562: cellular response to nitrogen levels4.47E-03
100GO:0017004: cytochrome complex assembly4.47E-03
101GO:0010119: regulation of stomatal movement4.84E-03
102GO:0010043: response to zinc ion4.84E-03
103GO:0009821: alkaloid biosynthetic process5.06E-03
104GO:0006098: pentose-phosphate shunt5.06E-03
105GO:0010112: regulation of systemic acquired resistance5.06E-03
106GO:0000373: Group II intron splicing5.06E-03
107GO:0009867: jasmonic acid mediated signaling pathway5.30E-03
108GO:0000103: sulfate assimilation6.32E-03
109GO:0019538: protein metabolic process6.32E-03
110GO:0043069: negative regulation of programmed cell death6.32E-03
111GO:0048829: root cap development6.32E-03
112GO:0051707: response to other organism6.83E-03
113GO:0009684: indoleacetic acid biosynthetic process6.98E-03
114GO:0010015: root morphogenesis6.98E-03
115GO:0043085: positive regulation of catalytic activity6.98E-03
116GO:0009682: induced systemic resistance6.98E-03
117GO:0052544: defense response by callose deposition in cell wall6.98E-03
118GO:0000266: mitochondrial fission7.68E-03
119GO:0012501: programmed cell death7.68E-03
120GO:0009651: response to salt stress8.25E-03
121GO:0010102: lateral root morphogenesis8.39E-03
122GO:0006807: nitrogen compound metabolic process8.39E-03
123GO:0009723: response to ethylene8.77E-03
124GO:0048366: leaf development8.97E-03
125GO:0002237: response to molecule of bacterial origin9.13E-03
126GO:0009933: meristem structural organization9.13E-03
127GO:0007031: peroxisome organization9.90E-03
128GO:0090351: seedling development9.90E-03
129GO:0034976: response to endoplasmic reticulum stress1.07E-02
130GO:0045892: negative regulation of transcription, DNA-templated1.23E-02
131GO:0043622: cortical microtubule organization1.23E-02
132GO:0007005: mitochondrion organization1.40E-02
133GO:0031348: negative regulation of defense response1.40E-02
134GO:0009625: response to insect1.49E-02
135GO:0016042: lipid catabolic process1.52E-02
136GO:0006629: lipid metabolic process1.57E-02
137GO:0009408: response to heat1.57E-02
138GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.68E-02
139GO:0042147: retrograde transport, endosome to Golgi1.68E-02
140GO:0010118: stomatal movement1.77E-02
141GO:0010087: phloem or xylem histogenesis1.77E-02
142GO:0008152: metabolic process1.78E-02
143GO:0009845: seed germination1.79E-02
144GO:0071472: cellular response to salt stress1.87E-02
145GO:0006662: glycerol ether metabolic process1.87E-02
146GO:0006508: proteolysis1.89E-02
147GO:0042752: regulation of circadian rhythm1.97E-02
148GO:0006623: protein targeting to vacuole2.07E-02
149GO:0048825: cotyledon development2.07E-02
150GO:0019252: starch biosynthetic process2.07E-02
151GO:0002229: defense response to oomycetes2.17E-02
152GO:0006635: fatty acid beta-oxidation2.17E-02
153GO:0007264: small GTPase mediated signal transduction2.28E-02
154GO:0016032: viral process2.28E-02
155GO:0019761: glucosinolate biosynthetic process2.28E-02
156GO:0030163: protein catabolic process2.38E-02
157GO:0010252: auxin homeostasis2.49E-02
158GO:0006914: autophagy2.49E-02
159GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.55E-02
160GO:0010286: heat acclimation2.60E-02
161GO:0006470: protein dephosphorylation2.61E-02
162GO:0009737: response to abscisic acid2.71E-02
163GO:0010468: regulation of gene expression2.72E-02
164GO:0009615: response to virus2.82E-02
165GO:0010029: regulation of seed germination2.94E-02
166GO:0009816: defense response to bacterium, incompatible interaction2.94E-02
167GO:0042128: nitrate assimilation3.05E-02
168GO:0006974: cellular response to DNA damage stimulus3.05E-02
169GO:0009738: abscisic acid-activated signaling pathway3.10E-02
170GO:0006950: response to stress3.17E-02
171GO:0009555: pollen development3.23E-02
172GO:0009826: unidimensional cell growth3.39E-02
173GO:0008219: cell death3.41E-02
174GO:0015031: protein transport3.51E-02
175GO:0048767: root hair elongation3.53E-02
176GO:0010311: lateral root formation3.53E-02
177GO:0006499: N-terminal protein myristoylation3.66E-02
178GO:0009407: toxin catabolic process3.66E-02
179GO:0007568: aging3.78E-02
180GO:0006865: amino acid transport3.91E-02
181GO:0007049: cell cycle3.93E-02
182GO:0045087: innate immune response4.03E-02
183GO:0006099: tricarboxylic acid cycle4.16E-02
184GO:0034599: cellular response to oxidative stress4.16E-02
185GO:0006810: transport4.32E-02
186GO:0006839: mitochondrial transport4.43E-02
187GO:0006468: protein phosphorylation4.61E-02
188GO:0046777: protein autophosphorylation4.66E-02
189GO:0042542: response to hydrogen peroxide4.69E-02
190GO:0009744: response to sucrose4.83E-02
RankGO TermAdjusted P value
1GO:0051670: inulinase activity0.00E+00
2GO:0004622: lysophospholipase activity0.00E+00
3GO:0015930: glutamate synthase activity0.00E+00
4GO:0070577: lysine-acetylated histone binding0.00E+00
5GO:0016508: long-chain-enoyl-CoA hydratase activity0.00E+00
6GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity0.00E+00
7GO:0051723: protein methylesterase activity0.00E+00
8GO:0004157: dihydropyrimidinase activity0.00E+00
9GO:0004846: urate oxidase activity0.00E+00
10GO:0003846: 2-acylglycerol O-acyltransferase activity0.00E+00
11GO:0042030: ATPase inhibitor activity0.00E+00
12GO:0016504: peptidase activator activity0.00E+00
13GO:0016034: maleylacetoacetate isomerase activity0.00E+00
14GO:0080007: S-nitrosoglutathione reductase activity0.00E+00
15GO:0036402: proteasome-activating ATPase activity8.39E-07
16GO:0008794: arsenate reductase (glutaredoxin) activity1.72E-05
17GO:0017025: TBP-class protein binding3.99E-05
18GO:0005496: steroid binding5.56E-05
19GO:0016887: ATPase activity7.34E-05
20GO:0102391: decanoate--CoA ligase activity1.13E-04
21GO:0008113: peptide-methionine (S)-S-oxide reductase activity1.13E-04
22GO:0004620: phospholipase activity1.49E-04
23GO:0004467: long-chain fatty acid-CoA ligase activity1.49E-04
24GO:0052747: sinapyl alcohol dehydrogenase activity1.91E-04
25GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity2.20E-04
26GO:0008692: 3-hydroxybutyryl-CoA epimerase activity2.20E-04
27GO:0004112: cyclic-nucleotide phosphodiesterase activity2.20E-04
28GO:0051669: fructan beta-fructosidase activity2.20E-04
29GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity2.20E-04
30GO:0019707: protein-cysteine S-acyltransferase activity2.20E-04
31GO:0031219: levanase activity2.20E-04
32GO:0030611: arsenate reductase activity2.20E-04
33GO:0019786: Atg8-specific protease activity2.20E-04
34GO:0016041: glutamate synthase (ferredoxin) activity2.20E-04
35GO:0004617: phosphoglycerate dehydrogenase activity4.90E-04
36GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity4.90E-04
37GO:0004061: arylformamidase activity4.90E-04
38GO:0019172: glyoxalase III activity4.90E-04
39GO:0015036: disulfide oxidoreductase activity4.90E-04
40GO:0004450: isocitrate dehydrogenase (NADP+) activity4.90E-04
41GO:0019779: Atg8 activating enzyme activity4.90E-04
42GO:0008517: folic acid transporter activity4.90E-04
43GO:0004566: beta-glucuronidase activity4.90E-04
44GO:0005515: protein binding5.15E-04
45GO:0045551: cinnamyl-alcohol dehydrogenase activity5.30E-04
46GO:0004022: alcohol dehydrogenase (NAD) activity6.01E-04
47GO:0005093: Rab GDP-dissociation inhibitor activity7.98E-04
48GO:0016151: nickel cation binding7.98E-04
49GO:0005047: signal recognition particle binding7.98E-04
50GO:0003840: gamma-glutamyltransferase activity7.98E-04
51GO:0036374: glutathione hydrolase activity7.98E-04
52GO:0004781: sulfate adenylyltransferase (ATP) activity7.98E-04
53GO:0016805: dipeptidase activity7.98E-04
54GO:0016787: hydrolase activity1.00E-03
55GO:0008276: protein methyltransferase activity1.14E-03
56GO:0001653: peptide receptor activity1.14E-03
57GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.14E-03
58GO:0010178: IAA-amino acid conjugate hydrolase activity1.14E-03
59GO:0004165: dodecenoyl-CoA delta-isomerase activity1.14E-03
60GO:0004300: enoyl-CoA hydratase activity1.14E-03
61GO:0070628: proteasome binding1.51E-03
62GO:0019776: Atg8 ligase activity1.51E-03
63GO:0010279: indole-3-acetic acid amido synthetase activity1.51E-03
64GO:0004301: epoxide hydrolase activity1.51E-03
65GO:0008234: cysteine-type peptidase activity1.52E-03
66GO:0005524: ATP binding1.72E-03
67GO:0005546: phosphatidylinositol-4,5-bisphosphate binding1.93E-03
68GO:0031386: protein tag1.93E-03
69GO:0051538: 3 iron, 4 sulfur cluster binding1.93E-03
70GO:0005471: ATP:ADP antiporter activity1.93E-03
71GO:0004356: glutamate-ammonia ligase activity1.93E-03
72GO:0015035: protein disulfide oxidoreductase activity2.17E-03
73GO:0031593: polyubiquitin binding2.38E-03
74GO:0047714: galactolipase activity2.38E-03
75GO:0004197: cysteine-type endopeptidase activity2.38E-03
76GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.86E-03
77GO:0003950: NAD+ ADP-ribosyltransferase activity2.86E-03
78GO:0004747: ribokinase activity2.86E-03
79GO:0004656: procollagen-proline 4-dioxygenase activity2.86E-03
80GO:0008235: metalloexopeptidase activity3.36E-03
81GO:0102425: myricetin 3-O-glucosyltransferase activity3.36E-03
82GO:0102360: daphnetin 3-O-glucosyltransferase activity3.36E-03
83GO:0016491: oxidoreductase activity3.65E-03
84GO:0047893: flavonol 3-O-glucosyltransferase activity3.90E-03
85GO:0008865: fructokinase activity3.90E-03
86GO:0005096: GTPase activator activity4.40E-03
87GO:0004630: phospholipase D activity4.47E-03
88GO:0008970: phosphatidylcholine 1-acylhydrolase activity4.47E-03
89GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity4.47E-03
90GO:0045309: protein phosphorylated amino acid binding5.68E-03
91GO:0047617: acyl-CoA hydrolase activity5.68E-03
92GO:0016844: strictosidine synthase activity5.68E-03
93GO:0008171: O-methyltransferase activity6.32E-03
94GO:0004364: glutathione transferase activity6.56E-03
95GO:0019904: protein domain specific binding6.98E-03
96GO:0004177: aminopeptidase activity6.98E-03
97GO:0008559: xenobiotic-transporting ATPase activity6.98E-03
98GO:0051287: NAD binding8.28E-03
99GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.39E-03
100GO:0005315: inorganic phosphate transmembrane transporter activity8.39E-03
101GO:0008131: primary amine oxidase activity9.13E-03
102GO:0004725: protein tyrosine phosphatase activity1.07E-02
103GO:0031418: L-ascorbic acid binding1.15E-02
104GO:0043424: protein histidine kinase binding1.23E-02
105GO:0035251: UDP-glucosyltransferase activity1.32E-02
106GO:0004298: threonine-type endopeptidase activity1.32E-02
107GO:0019706: protein-cysteine S-palmitoyltransferase activity1.32E-02
108GO:0004722: protein serine/threonine phosphatase activity1.36E-02
109GO:0003924: GTPase activity1.57E-02
110GO:0003756: protein disulfide isomerase activity1.58E-02
111GO:0047134: protein-disulfide reductase activity1.68E-02
112GO:0009055: electron carrier activity1.72E-02
113GO:0004791: thioredoxin-disulfide reductase activity1.97E-02
114GO:0016853: isomerase activity1.97E-02
115GO:0048038: quinone binding2.17E-02
116GO:0005509: calcium ion binding2.19E-02
117GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.38E-02
118GO:0008194: UDP-glycosyltransferase activity2.55E-02
119GO:0008483: transaminase activity2.60E-02
120GO:0008237: metallopeptidase activity2.60E-02
121GO:0016597: amino acid binding2.71E-02
122GO:0009931: calcium-dependent protein serine/threonine kinase activity3.05E-02
123GO:0004806: triglyceride lipase activity3.17E-02
124GO:0004683: calmodulin-dependent protein kinase activity3.17E-02
125GO:0000287: magnesium ion binding3.46E-02
126GO:0030145: manganese ion binding3.78E-02
127GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.03E-02
128GO:0004712: protein serine/threonine/tyrosine kinase activity4.30E-02
129GO:0043565: sequence-specific DNA binding4.83E-02
130GO:0005507: copper ion binding4.98E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0019822: P4 peroxisome0.00E+00
3GO:0005829: cytosol3.93E-08
4GO:0008540: proteasome regulatory particle, base subcomplex1.26E-07
5GO:0005783: endoplasmic reticulum2.73E-07
6GO:0005777: peroxisome2.96E-07
7GO:0031597: cytosolic proteasome complex1.47E-06
8GO:0031595: nuclear proteasome complex2.39E-06
9GO:0005773: vacuole8.12E-06
10GO:0000502: proteasome complex1.40E-05
11GO:0000138: Golgi trans cisterna2.20E-04
12GO:0031314: extrinsic component of mitochondrial inner membrane4.90E-04
13GO:0005794: Golgi apparatus5.87E-04
14GO:0005764: lysosome6.76E-04
15GO:0030139: endocytic vesicle7.98E-04
16GO:0005839: proteasome core complex1.12E-03
17GO:0005775: vacuolar lumen1.14E-03
18GO:0031461: cullin-RING ubiquitin ligase complex1.14E-03
19GO:0005886: plasma membrane1.27E-03
20GO:0005776: autophagosome1.51E-03
21GO:0005618: cell wall1.55E-03
22GO:0005737: cytoplasm2.03E-03
23GO:0030904: retromer complex2.38E-03
24GO:0005771: multivesicular body2.38E-03
25GO:0016363: nuclear matrix2.86E-03
26GO:0010005: cortical microtubule, transverse to long axis2.86E-03
27GO:0009524: phragmoplast2.97E-03
28GO:0000794: condensed nuclear chromosome3.36E-03
29GO:0005788: endoplasmic reticulum lumen3.40E-03
30GO:0000421: autophagosome membrane3.90E-03
31GO:0009514: glyoxysome4.47E-03
32GO:0005786: signal recognition particle, endoplasmic reticulum targeting4.47E-03
33GO:0005811: lipid particle4.47E-03
34GO:0005876: spindle microtubule5.68E-03
35GO:0005819: spindle5.79E-03
36GO:0031902: late endosome membrane6.30E-03
37GO:0055028: cortical microtubule6.32E-03
38GO:0005765: lysosomal membrane6.98E-03
39GO:0009574: preprophase band8.39E-03
40GO:0016602: CCAAT-binding factor complex8.39E-03
41GO:0005774: vacuolar membrane8.82E-03
42GO:0005635: nuclear envelope9.88E-03
43GO:0005769: early endosome1.07E-02
44GO:0015935: small ribosomal subunit1.32E-02
45GO:0005741: mitochondrial outer membrane1.32E-02
46GO:0016020: membrane1.38E-02
47GO:0009570: chloroplast stroma1.40E-02
48GO:0031410: cytoplasmic vesicle1.40E-02
49GO:0005743: mitochondrial inner membrane1.43E-02
50GO:0030136: clathrin-coated vesicle1.68E-02
51GO:0005623: cell1.69E-02
52GO:0071944: cell periphery2.38E-02
53GO:0005615: extracellular space2.55E-02
54GO:0005778: peroxisomal membrane2.60E-02
55GO:0000151: ubiquitin ligase complex3.41E-02
56GO:0000325: plant-type vacuole3.78E-02
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Gene type



Gene DE type