co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G65600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042430: indole-containing compound metabolic process	0.00E+00
2	GO:0030149: sphingolipid catabolic process	0.00E+00
3	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
4	GO:0048227: plasma membrane to endosome transport	0.00E+00
5	GO:2000541: positive regulation of protein geranylgeranylation	0.00E+00
6	GO:0006182: cGMP biosynthetic process	0.00E+00
7	GO:0046686: response to cadmium ion	5.17E-08
8	GO:0006101: citrate metabolic process	2.23E-06
9	GO:0009615: response to virus	2.35E-05
10	GO:0006097: glyoxylate cycle	5.47E-05
11	GO:0006099: tricarboxylic acid cycle	6.86E-05
12	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.11E-04
13	GO:0042742: defense response to bacterium	1.37E-04
14	GO:1900056: negative regulation of leaf senescence	1.47E-04
15	GO:0055114: oxidation-reduction process	1.49E-04
16	GO:0006102: isocitrate metabolic process	1.88E-04
17	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.18E-04
18	GO:1990022: RNA polymerase III complex localization to nucleus	2.18E-04
19	GO:0006007: glucose catabolic process	2.18E-04
20	GO:0044376: RNA polymerase II complex import to nucleus	2.18E-04
21	GO:0006805: xenobiotic metabolic process	2.18E-04
22	GO:1990641: response to iron ion starvation	2.18E-04
23	GO:0007264: small GTPase mediated signal transduction	2.30E-04
24	GO:0010120: camalexin biosynthetic process	2.33E-04
25	GO:0015031: protein transport	2.65E-04
26	GO:0019374: galactolipid metabolic process	4.86E-04
27	GO:0019752: carboxylic acid metabolic process	4.86E-04
28	GO:1902000: homogentisate catabolic process	4.86E-04
29	GO:0008535: respiratory chain complex IV assembly	4.86E-04
30	GO:0045905: positive regulation of translational termination	4.86E-04
31	GO:0031204: posttranslational protein targeting to membrane, translocation	4.86E-04
32	GO:0045901: positive regulation of translational elongation	4.86E-04
33	GO:0006452: translational frameshifting	4.86E-04
34	GO:0006508: proteolysis	7.72E-04
35	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	7.90E-04
36	GO:0009062: fatty acid catabolic process	7.90E-04
37	GO:0009072: aromatic amino acid family metabolic process	7.90E-04
38	GO:0009617: response to bacterium	9.45E-04
39	GO:0009651: response to salt stress	9.69E-04
40	GO:0006855: drug transmembrane transport	1.10E-03
41	GO:0098542: defense response to other organism	1.10E-03
42	GO:0042823: pyridoxal phosphate biosynthetic process	1.13E-03
43	GO:0002679: respiratory burst involved in defense response	1.13E-03
44	GO:0001676: long-chain fatty acid metabolic process	1.13E-03
45	GO:0045017: glycerolipid biosynthetic process	1.13E-03
46	GO:0006952: defense response	1.31E-03
47	GO:0045727: positive regulation of translation	1.50E-03
48	GO:0010363: regulation of plant-type hypersensitive response	1.50E-03
49	GO:0033356: UDP-L-arabinose metabolic process	1.50E-03
50	GO:0046345: abscisic acid catabolic process	1.50E-03
51	GO:0010118: stomatal movement	1.66E-03
52	GO:0009620: response to fungus	1.83E-03
53	GO:0000304: response to singlet oxygen	1.91E-03
54	GO:0009697: salicylic acid biosynthetic process	1.91E-03
55	GO:0007029: endoplasmic reticulum organization	1.91E-03
56	GO:0018344: protein geranylgeranylation	1.91E-03
57	GO:0010225: response to UV-C	1.91E-03
58	GO:0006979: response to oxidative stress	2.09E-03
59	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.35E-03
60	GO:0006561: proline biosynthetic process	2.35E-03
61	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	2.35E-03
62	GO:0010405: arabinogalactan protein metabolic process	2.35E-03
63	GO:0006751: glutathione catabolic process	2.35E-03
64	GO:0010256: endomembrane system organization	2.35E-03
65	GO:0043248: proteasome assembly	2.35E-03
66	GO:0009094: L-phenylalanine biosynthetic process	2.83E-03
67	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	2.83E-03
68	GO:0010555: response to mannitol	2.83E-03
69	GO:2000067: regulation of root morphogenesis	2.83E-03
70	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.33E-03
71	GO:0009751: response to salicylic acid	3.43E-03
72	GO:0009408: response to heat	3.50E-03
73	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.86E-03
74	GO:0009819: drought recovery	3.86E-03
75	GO:0009850: auxin metabolic process	3.86E-03
76	GO:0006644: phospholipid metabolic process	3.86E-03
77	GO:0009061: anaerobic respiration	3.86E-03
78	GO:0010150: leaf senescence	4.10E-03
79	GO:0008219: cell death	4.12E-03
80	GO:0007186: G-protein coupled receptor signaling pathway	4.42E-03
81	GO:0009808: lignin metabolic process	4.42E-03
82	GO:0006098: pentose-phosphate shunt	5.00E-03
83	GO:0009821: alkaloid biosynthetic process	5.00E-03
84	GO:0051865: protein autoubiquitination	5.00E-03
85	GO:0007338: single fertilization	5.00E-03
86	GO:0009051: pentose-phosphate shunt, oxidative branch	5.00E-03
87	GO:0030042: actin filament depolymerization	5.62E-03
88	GO:0048268: clathrin coat assembly	5.62E-03
89	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.62E-03
90	GO:0008202: steroid metabolic process	5.62E-03
91	GO:0090332: stomatal closure	5.62E-03
92	GO:0006896: Golgi to vacuole transport	6.25E-03
93	GO:0009688: abscisic acid biosynthetic process	6.25E-03
94	GO:0009682: induced systemic resistance	6.91E-03
95	GO:0000272: polysaccharide catabolic process	6.91E-03
96	GO:0009750: response to fructose	6.91E-03
97	GO:0015706: nitrate transport	7.60E-03
98	GO:0000266: mitochondrial fission	7.60E-03
99	GO:0012501: programmed cell death	7.60E-03
100	GO:0006468: protein phosphorylation	8.16E-03
101	GO:0006006: glucose metabolic process	8.30E-03
102	GO:0009718: anthocyanin-containing compound biosynthetic process	8.30E-03
103	GO:0006094: gluconeogenesis	8.30E-03
104	GO:0002237: response to molecule of bacterial origin	9.03E-03
105	GO:0009809: lignin biosynthetic process	9.08E-03
106	GO:0006486: protein glycosylation	9.08E-03
107	GO:0009737: response to abscisic acid	9.09E-03
108	GO:0042343: indole glucosinolate metabolic process	9.79E-03
109	GO:0010167: response to nitrate	9.79E-03
110	GO:0090351: seedling development	9.79E-03
111	GO:0010053: root epidermal cell differentiation	9.79E-03
112	GO:0006071: glycerol metabolic process	1.06E-02
113	GO:0006096: glycolytic process	1.07E-02
114	GO:0010187: negative regulation of seed germination	1.14E-02
115	GO:0006406: mRNA export from nucleus	1.14E-02
116	GO:2000377: regulation of reactive oxygen species metabolic process	1.14E-02
117	GO:0005992: trehalose biosynthetic process	1.14E-02
118	GO:0006874: cellular calcium ion homeostasis	1.22E-02
119	GO:0006886: intracellular protein transport	1.23E-02
120	GO:0009624: response to nematode	1.30E-02
121	GO:0031348: negative regulation of defense response	1.39E-02
122	GO:0010017: red or far-red light signaling pathway	1.39E-02
123	GO:0032259: methylation	1.46E-02
124	GO:0019722: calcium-mediated signaling	1.57E-02
125	GO:0010089: xylem development	1.57E-02
126	GO:0050832: defense response to fungus	1.72E-02
127	GO:0042391: regulation of membrane potential	1.75E-02
128	GO:0006520: cellular amino acid metabolic process	1.85E-02
129	GO:0048544: recognition of pollen	1.95E-02
130	GO:0009749: response to glucose	2.05E-02
131	GO:0009851: auxin biosynthetic process	2.05E-02
132	GO:0040008: regulation of growth	2.14E-02
133	GO:0080156: mitochondrial mRNA modification	2.15E-02
134	GO:0006891: intra-Golgi vesicle-mediated transport	2.15E-02
135	GO:0010193: response to ozone	2.15E-02
136	GO:0006635: fatty acid beta-oxidation	2.15E-02
137	GO:0009567: double fertilization forming a zygote and endosperm	2.46E-02
138	GO:0009607: response to biotic stimulus	2.91E-02
139	GO:0042128: nitrate assimilation	3.02E-02
140	GO:0006888: ER to Golgi vesicle-mediated transport	3.14E-02
141	GO:0009611: response to wounding	3.26E-02
142	GO:0009817: defense response to fungus, incompatible interaction	3.37E-02
143	GO:0030244: cellulose biosynthetic process	3.37E-02
144	GO:0009832: plant-type cell wall biogenesis	3.49E-02
145	GO:0006499: N-terminal protein myristoylation	3.62E-02
146	GO:0009407: toxin catabolic process	3.62E-02
147	GO:0010043: response to zinc ion	3.74E-02
148	GO:0000724: double-strand break repair via homologous recombination	3.86E-02
149	GO:0045087: innate immune response	3.99E-02
150	GO:0006457: protein folding	4.35E-02
151	GO:0006839: mitochondrial transport	4.38E-02
152	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.44E-02
153	GO:0006631: fatty acid metabolic process	4.51E-02
154	GO:0006897: endocytosis	4.51E-02
155	GO:0042542: response to hydrogen peroxide	4.65E-02
156	GO:0044550: secondary metabolite biosynthetic process	4.66E-02
157	GO:0009744: response to sucrose	4.78E-02
158	GO:0051707: response to other organism	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
2	GO:0005092: GDP-dissociation inhibitor activity	0.00E+00
3	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
4	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
5	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
6	GO:0051670: inulinase activity	0.00E+00
7	GO:0005093: Rab GDP-dissociation inhibitor activity	1.29E-08
8	GO:0003994: aconitate hydratase activity	2.23E-06
9	GO:0005524: ATP binding	3.25E-05
10	GO:0016831: carboxy-lyase activity	1.47E-04
11	GO:0051669: fructan beta-fructosidase activity	2.18E-04
12	GO:0031219: levanase activity	2.18E-04
13	GO:0008809: carnitine racemase activity	2.18E-04
14	GO:0004713: protein tyrosine kinase activity	3.94E-04
15	GO:0032934: sterol binding	4.86E-04
16	GO:0004775: succinate-CoA ligase (ADP-forming) activity	4.86E-04
17	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	4.86E-04
18	GO:0015036: disulfide oxidoreductase activity	4.86E-04
19	GO:0008517: folic acid transporter activity	4.86E-04
20	GO:0004776: succinate-CoA ligase (GDP-forming) activity	4.86E-04
21	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	4.86E-04
22	GO:0005096: GTPase activator activity	5.22E-04
23	GO:0003924: GTPase activity	7.70E-04
24	GO:0051539: 4 iron, 4 sulfur cluster binding	7.78E-04
25	GO:0003840: gamma-glutamyltransferase activity	7.90E-04
26	GO:0031683: G-protein beta/gamma-subunit complex binding	7.90E-04
27	GO:0036374: glutathione hydrolase activity	7.90E-04
28	GO:0004383: guanylate cyclase activity	7.90E-04
29	GO:0016805: dipeptidase activity	7.90E-04
30	GO:0001664: G-protein coupled receptor binding	7.90E-04
31	GO:0000030: mannosyltransferase activity	7.90E-04
32	GO:0016491: oxidoreductase activity	1.05E-03
33	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.13E-03
34	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.13E-03
35	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.13E-03
36	GO:0005086: ARF guanyl-nucleotide exchange factor activity	1.50E-03
37	GO:0004031: aldehyde oxidase activity	1.50E-03
38	GO:0050302: indole-3-acetaldehyde oxidase activity	1.50E-03
39	GO:0047769: arogenate dehydratase activity	1.50E-03
40	GO:0004737: pyruvate decarboxylase activity	1.50E-03
41	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.50E-03
42	GO:0004664: prephenate dehydratase activity	1.50E-03
43	GO:0008177: succinate dehydrogenase (ubiquinone) activity	1.91E-03
44	GO:0017137: Rab GTPase binding	1.91E-03
45	GO:0000104: succinate dehydrogenase activity	1.91E-03
46	GO:0002020: protease binding	1.91E-03
47	GO:0010294: abscisic acid glucosyltransferase activity	1.91E-03
48	GO:0102229: amylopectin maltohydrolase activity	2.35E-03
49	GO:0030976: thiamine pyrophosphate binding	2.35E-03
50	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.35E-03
51	GO:0004332: fructose-bisphosphate aldolase activity	2.35E-03
52	GO:0004674: protein serine/threonine kinase activity	2.60E-03
53	GO:0102391: decanoate--CoA ligase activity	2.83E-03
54	GO:0016161: beta-amylase activity	2.83E-03
55	GO:0004144: diacylglycerol O-acyltransferase activity	2.83E-03
56	GO:0004656: procollagen-proline 4-dioxygenase activity	2.83E-03
57	GO:0051920: peroxiredoxin activity	2.83E-03
58	GO:0004620: phospholipase activity	3.33E-03
59	GO:0004467: long-chain fatty acid-CoA ligase activity	3.33E-03
60	GO:0004143: diacylglycerol kinase activity	3.33E-03
61	GO:0008235: metalloexopeptidase activity	3.33E-03
62	GO:0008565: protein transporter activity	3.42E-03
63	GO:0052747: sinapyl alcohol dehydrogenase activity	3.86E-03
64	GO:0043022: ribosome binding	3.86E-03
65	GO:0016209: antioxidant activity	3.86E-03
66	GO:0015238: drug transmembrane transporter activity	4.33E-03
67	GO:0003951: NAD+ kinase activity	4.42E-03
68	GO:0008142: oxysterol binding	4.42E-03
69	GO:0008194: UDP-glycosyltransferase activity	4.73E-03
70	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.76E-03
71	GO:0030145: manganese ion binding	4.76E-03
72	GO:0008889: glycerophosphodiester phosphodiesterase activity	5.00E-03
73	GO:0071949: FAD binding	5.00E-03
74	GO:0003678: DNA helicase activity	5.00E-03
75	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.22E-03
76	GO:0045309: protein phosphorylated amino acid binding	5.62E-03
77	GO:0047617: acyl-CoA hydrolase activity	5.62E-03
78	GO:0016844: strictosidine synthase activity	5.62E-03
79	GO:0015112: nitrate transmembrane transporter activity	5.62E-03
80	GO:0008171: O-methyltransferase activity	6.25E-03
81	GO:0005545: 1-phosphatidylinositol binding	6.25E-03
82	GO:0019904: protein domain specific binding	6.91E-03
83	GO:0004177: aminopeptidase activity	6.91E-03
84	GO:0008559: xenobiotic-transporting ATPase activity	6.91E-03
85	GO:0005506: iron ion binding	7.02E-03
86	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.60E-03
87	GO:0008378: galactosyltransferase activity	7.60E-03
88	GO:0015114: phosphate ion transmembrane transporter activity	8.30E-03
89	GO:0050660: flavin adenine dinucleotide binding	8.60E-03
90	GO:0004970: ionotropic glutamate receptor activity	9.79E-03
91	GO:0005217: intracellular ligand-gated ion channel activity	9.79E-03
92	GO:0030552: cAMP binding	9.79E-03
93	GO:0030553: cGMP binding	9.79E-03
94	GO:0031418: L-ascorbic acid binding	1.14E-02
95	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.18E-02
96	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.18E-02
97	GO:0005216: ion channel activity	1.22E-02
98	GO:0043424: protein histidine kinase binding	1.22E-02
99	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.30E-02
100	GO:0004298: threonine-type endopeptidase activity	1.30E-02
101	GO:0030246: carbohydrate binding	1.31E-02
102	GO:0005507: copper ion binding	1.43E-02
103	GO:0016758: transferase activity, transferring hexosyl groups	1.58E-02
104	GO:0009055: electron carrier activity	1.69E-02
105	GO:0030551: cyclic nucleotide binding	1.75E-02
106	GO:0005249: voltage-gated potassium channel activity	1.75E-02
107	GO:0005525: GTP binding	1.77E-02
108	GO:0030276: clathrin binding	1.85E-02
109	GO:0010181: FMN binding	1.95E-02
110	GO:0016853: isomerase activity	1.95E-02
111	GO:0005509: calcium ion binding	2.14E-02
112	GO:0015297: antiporter activity	2.14E-02
113	GO:0048038: quinone binding	2.15E-02
114	GO:0008137: NADH dehydrogenase (ubiquinone) activity	2.15E-02
115	GO:0004197: cysteine-type endopeptidase activity	2.25E-02
116	GO:0016301: kinase activity	2.54E-02
117	GO:0008237: metallopeptidase activity	2.57E-02
118	GO:0016597: amino acid binding	2.68E-02
119	GO:0051213: dioxygenase activity	2.79E-02
120	GO:0030247: polysaccharide binding	3.14E-02
121	GO:0005515: protein binding	3.14E-02
122	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.25E-02
123	GO:0008168: methyltransferase activity	3.34E-02
124	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.37E-02
125	GO:0004601: peroxidase activity	3.47E-02
126	GO:0004222: metalloendopeptidase activity	3.62E-02
127	GO:0050897: cobalt ion binding	3.74E-02
128	GO:0043531: ADP binding	3.80E-02
129	GO:0003746: translation elongation factor activity	3.99E-02
130	GO:0003697: single-stranded DNA binding	3.99E-02
131	GO:0008233: peptidase activity	4.22E-02
132	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.25E-02
133	GO:0004497: monooxygenase activity	4.30E-02
134	GO:0050661: NADP binding	4.38E-02
135	GO:0004364: glutathione transferase activity	4.65E-02
136	GO:0020037: heme binding	4.68E-02
137	GO:0019825: oxygen binding	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0005784: Sec61 translocon complex	0.00E+00
2	GO:0031205: endoplasmic reticulum Sec complex	0.00E+00
3	GO:0005886: plasma membrane	1.80E-05
4	GO:0005829: cytosol	1.86E-05
5	GO:0005794: Golgi apparatus	2.36E-05
6	GO:0005774: vacuolar membrane	9.78E-05
7	GO:0005773: vacuole	4.18E-04
8	GO:0031314: extrinsic component of mitochondrial inner membrane	4.86E-04
9	GO:0005968: Rab-protein geranylgeranyltransferase complex	1.13E-03
10	GO:0030136: clathrin-coated vesicle	1.54E-03
11	GO:0030127: COPII vesicle coat	2.35E-03
12	GO:0005783: endoplasmic reticulum	2.48E-03
13	GO:0045273: respiratory chain complex II	3.86E-03
14	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3.86E-03
15	GO:0016021: integral component of membrane	3.99E-03
16	GO:0005618: cell wall	4.19E-03
17	GO:0016020: membrane	6.83E-03
18	GO:0090404: pollen tube tip	6.91E-03
19	GO:0008541: proteasome regulatory particle, lid subcomplex	6.91E-03
20	GO:0005750: mitochondrial respiratory chain complex III	9.03E-03
21	GO:0000502: proteasome complex	9.08E-03
22	GO:0005795: Golgi stack	9.79E-03
23	GO:0005905: clathrin-coated pit	1.30E-02
24	GO:0005839: proteasome core complex	1.30E-02
25	GO:0009506: plasmodesma	1.38E-02
26	GO:0005743: mitochondrial inner membrane	1.41E-02
27	GO:0015629: actin cytoskeleton	1.48E-02
28	GO:0019898: extrinsic component of membrane	2.05E-02
29	GO:0005737: cytoplasm	2.17E-02
30	GO:0009570: chloroplast stroma	3.23E-02
31	GO:0000325: plant-type vacuole	3.74E-02
32	GO:0005777: peroxisome	3.76E-02
33	GO:0005874: microtubule	4.15E-02
34	GO:0005789: endoplasmic reticulum membrane	4.47E-02