co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G64680

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0039694: viral RNA genome replication	0.00E+00
2	GO:0006390: transcription from mitochondrial promoter	1.57E-05
3	GO:0019673: GDP-mannose metabolic process	1.57E-05
4	GO:1902626: assembly of large subunit precursor of preribosome	7.34E-05
5	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	7.34E-05
6	GO:0009432: SOS response	7.34E-05
7	GO:0042256: mature ribosome assembly	7.34E-05
8	GO:0045039: protein import into mitochondrial inner membrane	7.34E-05
9	GO:0032940: secretion by cell	7.34E-05
10	GO:0000730: DNA recombinase assembly	1.11E-04
11	GO:0000460: maturation of 5.8S rRNA	1.53E-04
12	GO:0051205: protein insertion into membrane	1.53E-04
13	GO:0006099: tricarboxylic acid cycle	1.86E-04
14	GO:0006564: L-serine biosynthetic process	1.98E-04
15	GO:0006461: protein complex assembly	1.98E-04
16	GO:0002238: response to molecule of fungal origin	2.47E-04
17	GO:0006014: D-ribose metabolic process	2.47E-04
18	GO:0000470: maturation of LSU-rRNA	2.47E-04
19	GO:0000054: ribosomal subunit export from nucleus	2.97E-04
20	GO:0042148: strand invasion	3.49E-04
21	GO:0006102: isocitrate metabolic process	4.04E-04
22	GO:0010212: response to ionizing radiation	4.60E-04
23	GO:0006413: translational initiation	7.01E-04
24	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	7.65E-04
25	GO:0006312: mitotic recombination	7.65E-04
26	GO:0010053: root epidermal cell differentiation	9.64E-04
27	GO:0006289: nucleotide-excision repair	1.10E-03
28	GO:0006487: protein N-linked glycosylation	1.10E-03
29	GO:0007010: cytoskeleton organization	1.10E-03
30	GO:0009409: response to cold	1.40E-03
31	GO:0071215: cellular response to abscisic acid stimulus	1.40E-03
32	GO:0042147: retrograde transport, endosome to Golgi	1.56E-03
33	GO:0010501: RNA secondary structure unwinding	1.65E-03
34	GO:0019252: starch biosynthetic process	1.90E-03
35	GO:0006891: intra-Golgi vesicle-mediated transport	1.99E-03
36	GO:0080156: mitochondrial mRNA modification	1.99E-03
37	GO:0006310: DNA recombination	2.26E-03
38	GO:0006974: cellular response to DNA damage stimulus	2.74E-03
39	GO:0006950: response to stress	2.84E-03
40	GO:0048481: plant ovule development	3.05E-03
41	GO:0048767: root hair elongation	3.15E-03
42	GO:0010043: response to zinc ion	3.36E-03
43	GO:0006511: ubiquitin-dependent protein catabolic process	4.83E-03
44	GO:0006096: glycolytic process	5.85E-03
45	GO:0006412: translation	7.69E-03
46	GO:0009845: seed germination	8.21E-03
47	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.05E-02
48	GO:0046686: response to cadmium ion	1.12E-02
49	GO:0009826: unidimensional cell growth	1.29E-02
50	GO:0042254: ribosome biogenesis	1.34E-02
51	GO:0009860: pollen tube growth	1.39E-02
52	GO:0009793: embryo development ending in seed dormancy	1.67E-02
53	GO:0045454: cell redox homeostasis	1.75E-02
54	GO:0006281: DNA repair	2.03E-02
55	GO:0048364: root development	2.09E-02
56	GO:0009651: response to salt stress	2.42E-02
57	GO:0009735: response to cytokinin	2.87E-02
58	GO:0009416: response to light stimulus	3.06E-02
59	GO:0009611: response to wounding	3.11E-02
60	GO:0051301: cell division	3.25E-02
61	GO:0009414: response to water deprivation	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0050220: prostaglandin-E synthase activity	0.00E+00
2	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	1.57E-05
3	GO:0008446: GDP-mannose 4,6-dehydratase activity	1.57E-05
4	GO:0004298: threonine-type endopeptidase activity	2.93E-05
5	GO:0004776: succinate-CoA ligase (GDP-forming) activity	4.12E-05
6	GO:0004775: succinate-CoA ligase (ADP-forming) activity	4.12E-05
7	GO:0043023: ribosomal large subunit binding	1.11E-04
8	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.11E-04
9	GO:0070628: proteasome binding	1.53E-04
10	GO:0003697: single-stranded DNA binding	1.77E-04
11	GO:0015301: anion:anion antiporter activity	1.98E-04
12	GO:0005452: inorganic anion exchanger activity	1.98E-04
13	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.98E-04
14	GO:0031593: polyubiquitin binding	2.47E-04
15	GO:0004747: ribokinase activity	2.97E-04
16	GO:0000150: recombinase activity	3.49E-04
17	GO:0043022: ribosome binding	4.04E-04
18	GO:0004520: endodeoxyribonuclease activity	4.04E-04
19	GO:0000400: four-way junction DNA binding	4.04E-04
20	GO:0008865: fructokinase activity	4.04E-04
21	GO:0030955: potassium ion binding	5.76E-04
22	GO:0004743: pyruvate kinase activity	5.76E-04
23	GO:0003743: translation initiation factor activity	8.70E-04
24	GO:0043130: ubiquitin binding	1.10E-03
25	GO:0008094: DNA-dependent ATPase activity	1.25E-03
26	GO:0008233: peptidase activity	1.37E-03
27	GO:0003684: damaged DNA binding	2.26E-03
28	GO:0003735: structural constituent of ribosome	2.27E-03
29	GO:0005200: structural constituent of cytoskeleton	2.36E-03
30	GO:0004004: ATP-dependent RNA helicase activity	2.84E-03
31	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.05E-03
32	GO:0005524: ATP binding	3.52E-03
33	GO:0016740: transferase activity	4.34E-03
34	GO:0043621: protein self-association	4.48E-03
35	GO:0005507: copper ion binding	5.06E-03
36	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	5.21E-03
37	GO:0003690: double-stranded DNA binding	5.34E-03
38	GO:0005525: GTP binding	5.84E-03
39	GO:0015035: protein disulfide oxidoreductase activity	6.78E-03
40	GO:0008026: ATP-dependent helicase activity	6.92E-03
41	GO:0004386: helicase activity	7.06E-03
42	GO:0000287: magnesium ion binding	1.31E-02
43	GO:0003924: GTPase activity	2.03E-02
44	GO:0009055: electron carrier activity	2.14E-02
45	GO:0000166: nucleotide binding	3.06E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0005829: cytosol	2.10E-06
3	GO:0019773: proteasome core complex, alpha-subunit complex	3.93E-06
4	GO:0034245: mitochondrial DNA-directed RNA polymerase complex	1.57E-05
5	GO:0005839: proteasome core complex	2.93E-05
6	GO:0008250: oligosaccharyltransferase complex	1.98E-04
7	GO:0005762: mitochondrial large ribosomal subunit	2.97E-04
8	GO:0000502: proteasome complex	3.13E-04
9	GO:0030687: preribosome, large subunit precursor	3.49E-04
10	GO:0005852: eukaryotic translation initiation factor 3 complex	7.00E-04
11	GO:0043234: protein complex	1.03E-03
12	GO:0005739: mitochondrion	2.43E-03
13	GO:0015934: large ribosomal subunit	3.36E-03
14	GO:0022626: cytosolic ribosome	3.41E-03
15	GO:0005774: vacuolar membrane	4.58E-03
16	GO:0005856: cytoskeleton	4.60E-03
17	GO:0009570: chloroplast stroma	1.03E-02
18	GO:0005789: endoplasmic reticulum membrane	1.10E-02
19	GO:0005783: endoplasmic reticulum	1.12E-02
20	GO:0022627: cytosolic small ribosomal subunit	1.18E-02
21	GO:0005730: nucleolus	1.22E-02
22	GO:0005737: cytoplasm	1.35E-02
23	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.41E-02
24	GO:0005743: mitochondrial inner membrane	1.93E-02
25	GO:0009506: plasmodesma	2.50E-02
26	GO:0005618: cell wall	2.86E-02
27	GO:0005794: Golgi apparatus	3.65E-02
28	GO:0005773: vacuole	3.83E-02
29	GO:0005802: trans-Golgi network	4.28E-02
30	GO:0005886: plasma membrane	4.56E-02
31	GO:0005768: endosome	4.69E-02