Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G64030

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006399: tRNA metabolic process0.00E+00
2GO:0018160: peptidyl-pyrromethane cofactor linkage0.00E+00
3GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
4GO:0090071: negative regulation of ribosome biogenesis0.00E+00
5GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
6GO:0006223: uracil salvage0.00E+00
7GO:0033231: carbohydrate export0.00E+00
8GO:2000121: regulation of removal of superoxide radicals0.00E+00
9GO:0097164: ammonium ion metabolic process0.00E+00
10GO:1905499: trichome papilla formation0.00E+00
11GO:0006412: translation5.10E-14
12GO:0015995: chlorophyll biosynthetic process6.97E-12
13GO:0042254: ribosome biogenesis1.03E-09
14GO:0032544: plastid translation2.14E-09
15GO:0006782: protoporphyrinogen IX biosynthetic process1.12E-08
16GO:0006783: heme biosynthetic process3.88E-07
17GO:0009658: chloroplast organization2.71E-06
18GO:0015979: photosynthesis9.59E-06
19GO:0009735: response to cytokinin1.83E-05
20GO:0006779: porphyrin-containing compound biosynthetic process3.12E-05
21GO:0010027: thylakoid membrane organization8.95E-05
22GO:0045038: protein import into chloroplast thylakoid membrane1.21E-04
23GO:0042372: phylloquinone biosynthetic process2.36E-04
24GO:1901259: chloroplast rRNA processing2.36E-04
25GO:0010444: guard mother cell differentiation3.06E-04
26GO:1902458: positive regulation of stomatal opening3.52E-04
27GO:0034337: RNA folding3.52E-04
28GO:0048363: mucilage pectin metabolic process3.52E-04
29GO:1902334: fructose export from vacuole to cytoplasm3.52E-04
30GO:0015755: fructose transport3.52E-04
31GO:1904966: positive regulation of vitamin E biosynthetic process3.52E-04
32GO:0010442: guard cell morphogenesis3.52E-04
33GO:1904964: positive regulation of phytol biosynthetic process3.52E-04
34GO:0042371: vitamin K biosynthetic process3.52E-04
35GO:0042335: cuticle development3.63E-04
36GO:0042255: ribosome assembly3.84E-04
37GO:0009932: cell tip growth4.70E-04
38GO:0032502: developmental process5.74E-04
39GO:0080183: response to photooxidative stress7.67E-04
40GO:0006529: asparagine biosynthetic process7.67E-04
41GO:1903426: regulation of reactive oxygen species biosynthetic process7.67E-04
42GO:0006568: tryptophan metabolic process7.67E-04
43GO:0052541: plant-type cell wall cellulose metabolic process7.67E-04
44GO:1902326: positive regulation of chlorophyll biosynthetic process7.67E-04
45GO:0070981: L-asparagine biosynthetic process7.67E-04
46GO:0071668: plant-type cell wall assembly7.67E-04
47GO:0015714: phosphoenolpyruvate transport1.24E-03
48GO:0090391: granum assembly1.24E-03
49GO:0006518: peptide metabolic process1.24E-03
50GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.24E-03
51GO:0006760: folic acid-containing compound metabolic process1.24E-03
52GO:0006241: CTP biosynthetic process1.79E-03
53GO:0009052: pentose-phosphate shunt, non-oxidative branch1.79E-03
54GO:0006424: glutamyl-tRNA aminoacylation1.79E-03
55GO:0006165: nucleoside diphosphate phosphorylation1.79E-03
56GO:0006228: UTP biosynthetic process1.79E-03
57GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis1.79E-03
58GO:2001141: regulation of RNA biosynthetic process1.79E-03
59GO:0019344: cysteine biosynthetic process1.80E-03
60GO:0006633: fatty acid biosynthetic process1.81E-03
61GO:0045454: cell redox homeostasis1.83E-03
62GO:0051260: protein homooligomerization2.18E-03
63GO:0006183: GTP biosynthetic process2.40E-03
64GO:0046656: folic acid biosynthetic process2.40E-03
65GO:0006021: inositol biosynthetic process2.40E-03
66GO:0030007: cellular potassium ion homeostasis2.40E-03
67GO:0015713: phosphoglycerate transport2.40E-03
68GO:0044206: UMP salvage2.40E-03
69GO:0009306: protein secretion2.82E-03
70GO:0016117: carotenoid biosynthetic process3.06E-03
71GO:0031365: N-terminal protein amino acid modification3.07E-03
72GO:0016123: xanthophyll biosynthetic process3.07E-03
73GO:0006665: sphingolipid metabolic process3.07E-03
74GO:0034052: positive regulation of plant-type hypersensitive response3.07E-03
75GO:0032543: mitochondrial translation3.07E-03
76GO:0043097: pyrimidine nucleoside salvage3.07E-03
77GO:0010236: plastoquinone biosynthetic process3.07E-03
78GO:0006555: methionine metabolic process3.79E-03
79GO:0006655: phosphatidylglycerol biosynthetic process3.79E-03
80GO:0010190: cytochrome b6f complex assembly3.79E-03
81GO:0006206: pyrimidine nucleobase metabolic process3.79E-03
82GO:0007035: vacuolar acidification3.79E-03
83GO:0032973: amino acid export3.79E-03
84GO:0009117: nucleotide metabolic process3.79E-03
85GO:0046855: inositol phosphate dephosphorylation3.79E-03
86GO:0009972: cytidine deamination3.79E-03
87GO:0009646: response to absence of light3.83E-03
88GO:0010555: response to mannitol4.57E-03
89GO:0009955: adaxial/abaxial pattern specification4.57E-03
90GO:0017148: negative regulation of translation4.57E-03
91GO:0048280: vesicle fusion with Golgi apparatus4.57E-03
92GO:0046654: tetrahydrofolate biosynthetic process4.57E-03
93GO:0009854: oxidative photosynthetic carbon pathway4.57E-03
94GO:0009772: photosynthetic electron transport in photosystem II5.40E-03
95GO:0043090: amino acid import5.40E-03
96GO:0006614: SRP-dependent cotranslational protein targeting to membrane5.40E-03
97GO:0010196: nonphotochemical quenching5.40E-03
98GO:0048564: photosystem I assembly6.27E-03
99GO:0009642: response to light intensity6.27E-03
100GO:0043068: positive regulation of programmed cell death6.27E-03
101GO:0006605: protein targeting6.27E-03
102GO:0006353: DNA-templated transcription, termination6.27E-03
103GO:2000070: regulation of response to water deprivation6.27E-03
104GO:0009627: systemic acquired resistance7.12E-03
105GO:0017004: cytochrome complex assembly7.19E-03
106GO:0071482: cellular response to light stimulus7.19E-03
107GO:0009657: plastid organization7.19E-03
108GO:0009245: lipid A biosynthetic process8.16E-03
109GO:0080144: amino acid homeostasis8.16E-03
110GO:0034765: regulation of ion transmembrane transport8.16E-03
111GO:0035999: tetrahydrofolate interconversion9.17E-03
112GO:0042761: very long-chain fatty acid biosynthetic process9.17E-03
113GO:0048354: mucilage biosynthetic process involved in seed coat development9.17E-03
114GO:0006896: Golgi to vacuole transport1.02E-02
115GO:0006995: cellular response to nitrogen starvation1.02E-02
116GO:0006535: cysteine biosynthetic process from serine1.02E-02
117GO:0048765: root hair cell differentiation1.13E-02
118GO:0000038: very long-chain fatty acid metabolic process1.13E-02
119GO:0009773: photosynthetic electron transport in photosystem I1.13E-02
120GO:0043085: positive regulation of catalytic activity1.13E-02
121GO:0006415: translational termination1.13E-02
122GO:0006352: DNA-templated transcription, initiation1.13E-02
123GO:0009750: response to fructose1.13E-02
124GO:0006790: sulfur compound metabolic process1.25E-02
125GO:0016024: CDP-diacylglycerol biosynthetic process1.25E-02
126GO:0008380: RNA splicing1.26E-02
127GO:0050826: response to freezing1.37E-02
128GO:0009725: response to hormone1.37E-02
129GO:0010628: positive regulation of gene expression1.37E-02
130GO:0008643: carbohydrate transport1.48E-02
131GO:0006541: glutamine metabolic process1.49E-02
132GO:0010207: photosystem II assembly1.49E-02
133GO:0046854: phosphatidylinositol phosphorylation1.61E-02
134GO:0010053: root epidermal cell differentiation1.61E-02
135GO:0019853: L-ascorbic acid biosynthetic process1.61E-02
136GO:0042538: hyperosmotic salinity response1.72E-02
137GO:0006071: glycerol metabolic process1.74E-02
138GO:0019762: glucosinolate catabolic process1.74E-02
139GO:0010025: wax biosynthetic process1.74E-02
140GO:0006636: unsaturated fatty acid biosynthetic process1.74E-02
141GO:0006487: protein N-linked glycosylation1.88E-02
142GO:0009116: nucleoside metabolic process1.88E-02
143GO:0000027: ribosomal large subunit assembly1.88E-02
144GO:0045333: cellular respiration1.88E-02
145GO:0010026: trichome differentiation2.01E-02
146GO:0007017: microtubule-based process2.01E-02
147GO:0015992: proton transport2.15E-02
148GO:0061077: chaperone-mediated protein folding2.15E-02
149GO:0009814: defense response, incompatible interaction2.29E-02
150GO:0006730: one-carbon metabolic process2.29E-02
151GO:0055114: oxidation-reduction process2.36E-02
152GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.44E-02
153GO:0009411: response to UV2.44E-02
154GO:0010091: trichome branching2.59E-02
155GO:0042127: regulation of cell proliferation2.59E-02
156GO:0019722: calcium-mediated signaling2.59E-02
157GO:0070417: cellular response to cold2.74E-02
158GO:0042147: retrograde transport, endosome to Golgi2.74E-02
159GO:0000271: polysaccharide biosynthetic process2.90E-02
160GO:0080022: primary root development2.90E-02
161GO:0000413: protein peptidyl-prolyl isomerization2.90E-02
162GO:0009741: response to brassinosteroid3.06E-02
163GO:0045489: pectin biosynthetic process3.06E-02
164GO:0006662: glycerol ether metabolic process3.06E-02
165GO:0006623: protein targeting to vacuole3.39E-02
166GO:0006891: intra-Golgi vesicle-mediated transport3.55E-02
167GO:0010583: response to cyclopentenone3.72E-02
168GO:0009790: embryo development3.84E-02
169GO:1901657: glycosyl compound metabolic process3.90E-02
170GO:0009409: response to cold4.03E-02
171GO:0009567: double fertilization forming a zygote and endosperm4.07E-02
172GO:0009828: plant-type cell wall loosening4.07E-02
173GO:0010286: heat acclimation4.25E-02
174GO:0071805: potassium ion transmembrane transport4.25E-02
175GO:0007267: cell-cell signaling4.25E-02
176GO:0040008: regulation of growth4.33E-02
177GO:0000910: cytokinesis4.43E-02
178GO:0010029: regulation of seed germination4.80E-02
RankGO TermAdjusted P value
1GO:0015284: fructose uniporter activity0.00E+00
2GO:0005048: signal sequence binding0.00E+00
3GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
4GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
5GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
6GO:0008887: glycerate kinase activity0.00E+00
7GO:0015269: calcium-activated potassium channel activity0.00E+00
8GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
9GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
10GO:0004853: uroporphyrinogen decarboxylase activity0.00E+00
11GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
12GO:0004418: hydroxymethylbilane synthase activity0.00E+00
13GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
14GO:0015038: glutathione disulfide oxidoreductase activity0.00E+00
15GO:0019843: rRNA binding4.10E-19
16GO:0003735: structural constituent of ribosome9.68E-16
17GO:0016851: magnesium chelatase activity4.34E-05
18GO:0010347: L-galactose-1-phosphate phosphatase activity3.52E-04
19GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity3.52E-04
20GO:0030794: (S)-coclaurine-N-methyltransferase activity3.52E-04
21GO:0004425: indole-3-glycerol-phosphate synthase activity3.52E-04
22GO:0015121: phosphoenolpyruvate:phosphate antiporter activity3.52E-04
23GO:0009374: biotin binding3.52E-04
24GO:0004655: porphobilinogen synthase activity3.52E-04
25GO:0004071: aspartate-ammonia ligase activity3.52E-04
26GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity3.52E-04
27GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.26E-04
28GO:0042389: omega-3 fatty acid desaturase activity7.67E-04
29GO:0009977: proton motive force dependent protein transmembrane transporter activity7.67E-04
30GO:0102083: 7,8-dihydromonapterin aldolase activity7.67E-04
31GO:0052832: inositol monophosphate 3-phosphatase activity7.67E-04
32GO:0016630: protochlorophyllide reductase activity7.67E-04
33GO:0008934: inositol monophosphate 1-phosphatase activity7.67E-04
34GO:0004150: dihydroneopterin aldolase activity7.67E-04
35GO:0052833: inositol monophosphate 4-phosphatase activity7.67E-04
36GO:0005353: fructose transmembrane transporter activity7.67E-04
37GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity7.67E-04
38GO:0010291: carotene beta-ring hydroxylase activity7.67E-04
39GO:0004148: dihydrolipoyl dehydrogenase activity1.24E-03
40GO:0004751: ribose-5-phosphate isomerase activity1.24E-03
41GO:0051119: sugar transmembrane transporter activity1.45E-03
42GO:0008097: 5S rRNA binding1.79E-03
43GO:0035529: NADH pyrophosphatase activity1.79E-03
44GO:0016149: translation release factor activity, codon specific1.79E-03
45GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity1.79E-03
46GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity1.79E-03
47GO:0004550: nucleoside diphosphate kinase activity1.79E-03
48GO:0043023: ribosomal large subunit binding1.79E-03
49GO:0005528: FK506 binding1.80E-03
50GO:0004659: prenyltransferase activity2.40E-03
51GO:0001053: plastid sigma factor activity2.40E-03
52GO:0004845: uracil phosphoribosyltransferase activity2.40E-03
53GO:0004045: aminoacyl-tRNA hydrolase activity2.40E-03
54GO:0016987: sigma factor activity2.40E-03
55GO:0043495: protein anchor2.40E-03
56GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity2.40E-03
57GO:0015120: phosphoglycerate transmembrane transporter activity2.40E-03
58GO:0003727: single-stranded RNA binding2.82E-03
59GO:0003989: acetyl-CoA carboxylase activity3.07E-03
60GO:0009922: fatty acid elongase activity3.07E-03
61GO:0003959: NADPH dehydrogenase activity3.07E-03
62GO:0004040: amidase activity3.07E-03
63GO:0016651: oxidoreductase activity, acting on NAD(P)H3.07E-03
64GO:0015271: outward rectifier potassium channel activity3.79E-03
65GO:0031177: phosphopantetheine binding3.79E-03
66GO:0016208: AMP binding3.79E-03
67GO:0016462: pyrophosphatase activity3.79E-03
68GO:0004124: cysteine synthase activity4.57E-03
69GO:0051920: peroxiredoxin activity4.57E-03
70GO:0004126: cytidine deaminase activity4.57E-03
71GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.57E-03
72GO:0051753: mannan synthase activity4.57E-03
73GO:0004849: uridine kinase activity4.57E-03
74GO:0000035: acyl binding4.57E-03
75GO:0016491: oxidoreductase activity4.93E-03
76GO:0015035: protein disulfide oxidoreductase activity5.19E-03
77GO:0008235: metalloexopeptidase activity5.40E-03
78GO:0019899: enzyme binding5.40E-03
79GO:0016722: oxidoreductase activity, oxidizing metal ions5.67E-03
80GO:0016209: antioxidant activity6.27E-03
81GO:0008312: 7S RNA binding6.27E-03
82GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process6.27E-03
83GO:0005267: potassium channel activity7.19E-03
84GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water7.19E-03
85GO:0102483: scopolin beta-glucosidase activity7.51E-03
86GO:0003747: translation release factor activity8.16E-03
87GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors8.16E-03
88GO:0008889: glycerophosphodiester phosphodiesterase activity8.16E-03
89GO:0008047: enzyme activator activity1.02E-02
90GO:0004177: aminopeptidase activity1.13E-02
91GO:0046961: proton-transporting ATPase activity, rotational mechanism1.13E-02
92GO:0008794: arsenate reductase (glutaredoxin) activity1.13E-02
93GO:0008422: beta-glucosidase activity1.16E-02
94GO:0051537: 2 iron, 2 sulfur cluster binding1.48E-02
95GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.74E-02
96GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.74E-02
97GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.74E-02
98GO:0004601: peroxidase activity1.75E-02
99GO:0003690: double-stranded DNA binding1.91E-02
100GO:0005216: ion channel activity2.01E-02
101GO:0004176: ATP-dependent peptidase activity2.15E-02
102GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.29E-02
103GO:0004650: polygalacturonase activity2.40E-02
104GO:0022891: substrate-specific transmembrane transporter activity2.44E-02
105GO:0030570: pectate lyase activity2.44E-02
106GO:0008514: organic anion transmembrane transporter activity2.59E-02
107GO:0047134: protein-disulfide reductase activity2.74E-02
108GO:0008080: N-acetyltransferase activity3.06E-02
109GO:0004791: thioredoxin-disulfide reductase activity3.22E-02
110GO:0010181: FMN binding3.22E-02
111GO:0048038: quinone binding3.55E-02
112GO:0030170: pyridoxal phosphate binding3.65E-02
113GO:0000156: phosphorelay response regulator activity3.90E-02
114GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.90E-02
115GO:0009055: electron carrier activity4.07E-02
116GO:0008483: transaminase activity4.25E-02
117GO:0008237: metallopeptidase activity4.25E-02
118GO:0005200: structural constituent of cytoskeleton4.25E-02
119GO:0015297: antiporter activity4.33E-02
120GO:0016597: amino acid binding4.43E-02
121GO:0016168: chlorophyll binding4.80E-02
122GO:0008375: acetylglucosaminyltransferase activity4.99E-02
RankGO TermAdjusted P value
1GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
2GO:0044391: ribosomal subunit0.00E+00
3GO:0009507: chloroplast1.07E-56
4GO:0009570: chloroplast stroma2.63E-40
5GO:0009941: chloroplast envelope3.00E-36
6GO:0009535: chloroplast thylakoid membrane3.47E-25
7GO:0009579: thylakoid4.93E-19
8GO:0005840: ribosome1.29E-17
9GO:0009543: chloroplast thylakoid lumen1.43E-11
10GO:0031977: thylakoid lumen8.49E-11
11GO:0009534: chloroplast thylakoid1.23E-08
12GO:0009654: photosystem II oxygen evolving complex8.21E-06
13GO:0031969: chloroplast membrane4.98E-05
14GO:0000311: plastid large ribosomal subunit6.40E-05
15GO:0009536: plastid1.25E-04
16GO:0009515: granal stacked thylakoid3.52E-04
17GO:0009923: fatty acid elongase complex3.52E-04
18GO:0019898: extrinsic component of membrane4.83E-04
19GO:0046658: anchored component of plasma membrane6.96E-04
20GO:0009295: nucleoid7.28E-04
21GO:0080085: signal recognition particle, chloroplast targeting7.67E-04
22GO:0042170: plastid membrane7.67E-04
23GO:0033281: TAT protein transport complex1.24E-03
24GO:0010007: magnesium chelatase complex1.24E-03
25GO:0009509: chromoplast1.24E-03
26GO:0009317: acetyl-CoA carboxylase complex1.24E-03
27GO:0000312: plastid small ribosomal subunit1.30E-03
28GO:0015934: large ribosomal subunit1.40E-03
29GO:0042646: plastid nucleoid1.79E-03
30GO:0015935: small ribosomal subunit2.18E-03
31GO:0048046: apoplast2.96E-03
32GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain3.07E-03
33GO:0009505: plant-type cell wall4.43E-03
34GO:0016363: nuclear matrix4.57E-03
35GO:0031225: anchored component of membrane4.99E-03
36GO:0009533: chloroplast stromal thylakoid5.40E-03
37GO:0012507: ER to Golgi transport vesicle membrane6.27E-03
38GO:0009539: photosystem II reaction center7.19E-03
39GO:0005786: signal recognition particle, endoplasmic reticulum targeting7.19E-03
40GO:0005763: mitochondrial small ribosomal subunit8.16E-03
41GO:0045298: tubulin complex8.16E-03
42GO:0032040: small-subunit processome1.25E-02
43GO:0009508: plastid chromosome1.37E-02
44GO:0030095: chloroplast photosystem II1.49E-02
45GO:0016020: membrane1.82E-02
46GO:0042651: thylakoid membrane2.01E-02
47GO:0005618: cell wall2.17E-02
48GO:0009504: cell plate3.39E-02
49GO:0009523: photosystem II3.39E-02
50GO:0005778: peroxisomal membrane4.25E-02
51GO:0030529: intracellular ribonucleoprotein complex4.62E-02
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Gene type



Gene DE type