co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G63180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090391: granum assembly	2.00E-08
2	GO:0010027: thylakoid membrane organization	2.25E-07
3	GO:0015995: chlorophyll biosynthetic process	3.03E-07
4	GO:0010196: nonphotochemical quenching	5.60E-07
5	GO:0019253: reductive pentose-phosphate cycle	4.12E-06
6	GO:0046467: membrane lipid biosynthetic process	6.71E-06
7	GO:0015671: oxygen transport	6.71E-06
8	GO:1902458: positive regulation of stomatal opening	6.71E-06
9	GO:0071277: cellular response to calcium ion	6.71E-06
10	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.83E-05
11	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.83E-05
12	GO:0015979: photosynthesis	2.65E-05
13	GO:0006000: fructose metabolic process	3.35E-05
14	GO:0034599: cellular response to oxidative stress	5.95E-05
15	GO:0045038: protein import into chloroplast thylakoid membrane	9.53E-05
16	GO:0031365: N-terminal protein amino acid modification	9.53E-05
17	GO:0010189: vitamin E biosynthetic process	1.46E-04
18	GO:0071470: cellular response to osmotic stress	1.46E-04
19	GO:0009704: de-etiolation	2.03E-04
20	GO:2000070: regulation of response to water deprivation	2.03E-04
21	GO:0006002: fructose 6-phosphate metabolic process	2.33E-04
22	GO:0015996: chlorophyll catabolic process	2.33E-04
23	GO:0007186: G-protein coupled receptor signaling pathway	2.33E-04
24	GO:0090333: regulation of stomatal closure	2.64E-04
25	GO:0006783: heme biosynthetic process	2.64E-04
26	GO:0019432: triglyceride biosynthetic process	2.64E-04
27	GO:0006779: porphyrin-containing compound biosynthetic process	2.95E-04
28	GO:0006782: protoporphyrinogen IX biosynthetic process	3.28E-04
29	GO:0045037: protein import into chloroplast stroma	3.96E-04
30	GO:0006006: glucose metabolic process	4.30E-04
31	GO:0009725: response to hormone	4.30E-04
32	GO:0006094: gluconeogenesis	4.30E-04
33	GO:0005986: sucrose biosynthetic process	4.30E-04
34	GO:0010207: photosystem II assembly	4.66E-04
35	GO:0010182: sugar mediated signaling pathway	8.97E-04
36	GO:0019252: starch biosynthetic process	9.82E-04
37	GO:0016051: carbohydrate biosynthetic process	1.81E-03
38	GO:0006631: fatty acid metabolic process	2.03E-03
39	GO:0009744: response to sucrose	2.14E-03
40	GO:0006096: glycolytic process	2.93E-03
41	GO:0055114: oxidation-reduction process	4.19E-03
42	GO:0009658: chloroplast organization	6.50E-03
43	GO:0080167: response to karrikin	7.55E-03
44	GO:0008152: metabolic process	1.06E-02
45	GO:0009735: response to cytokinin	1.40E-02
46	GO:0009416: response to light stimulus	1.49E-02
47	GO:0045893: positive regulation of transcription, DNA-templated	1.64E-02
48	GO:0042742: defense response to bacterium	2.46E-02
49	GO:0006979: response to oxidative stress	2.47E-02
50	GO:0015031: protein transport	2.92E-02
51	GO:0006810: transport	3.23E-02
52	GO:0005975: carbohydrate metabolic process	3.31E-02
53	GO:0009737: response to abscisic acid	4.22E-02
54	GO:0016310: phosphorylation	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0045550: geranylgeranyl reductase activity	0.00E+00
2	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
3	GO:0090711: FMN hydrolase activity	0.00E+00
4	GO:0005344: oxygen transporter activity	6.71E-06
5	GO:0016630: protochlorophyllide reductase activity	1.83E-05
6	GO:0008883: glutamyl-tRNA reductase activity	1.83E-05
7	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.83E-05
8	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	1.83E-05
9	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	3.35E-05
10	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	5.17E-05
11	GO:0050661: NADP binding	6.58E-05
12	GO:0003959: NADPH dehydrogenase activity	9.53E-05
13	GO:0042578: phosphoric ester hydrolase activity	1.20E-04
14	GO:0008235: metalloexopeptidase activity	1.74E-04
15	GO:0004177: aminopeptidase activity	3.61E-04
16	GO:0004872: receptor activity	9.82E-04
17	GO:0043621: protein self-association	2.26E-03
18	GO:0051287: NAD binding	2.43E-03
19	GO:0019825: oxygen binding	1.91E-02
20	GO:0005509: calcium ion binding	2.32E-02
21	GO:0046872: metal ion binding	2.39E-02
22	GO:0005215: transporter activity	2.64E-02
23	GO:0016491: oxidoreductase activity	2.99E-02
24	GO:0003729: mRNA binding	3.27E-02
25	GO:0020037: heme binding	3.40E-02
26	GO:0016787: hydrolase activity	4.24E-02

Rank	GO Term	Adjusted P value
1	GO:0009515: granal stacked thylakoid	0.00E+00
2	GO:0009534: chloroplast thylakoid	1.64E-13
3	GO:0009507: chloroplast	2.63E-10
4	GO:0009535: chloroplast thylakoid membrane	2.11E-09
5	GO:0009941: chloroplast envelope	2.98E-08
6	GO:0009579: thylakoid	9.37E-08
7	GO:0009570: chloroplast stroma	2.46E-06
8	GO:0031969: chloroplast membrane	2.15E-05
9	GO:0009528: plastid inner membrane	3.35E-05
10	GO:0009527: plastid outer membrane	7.23E-05
11	GO:0043234: protein complex	5.39E-04
12	GO:0009654: photosystem II oxygen evolving complex	6.14E-04
13	GO:0009532: plastid stroma	6.53E-04
14	GO:0019898: extrinsic component of membrane	9.82E-04
15	GO:0010319: stromule	1.20E-03
16	GO:0009707: chloroplast outer membrane	1.55E-03
17	GO:0031977: thylakoid lumen	2.03E-03
18	GO:0009706: chloroplast inner membrane	3.32E-03
19	GO:0009543: chloroplast thylakoid lumen	3.86E-03
20	GO:0048046: apoplast	9.31E-03
21	GO:0016021: integral component of membrane	1.33E-02