GO Enrichment Analysis of Co-expressed Genes with
AT5G63060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015979: photosynthesis | 6.19E-06 |
| 2 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.67E-05 |
| 3 | GO:1904964: positive regulation of phytol biosynthetic process | 1.67E-05 |
| 4 | GO:1902458: positive regulation of stomatal opening | 1.67E-05 |
| 5 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.67E-05 |
| 6 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 4.35E-05 |
| 7 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 4.35E-05 |
| 8 | GO:0006696: ergosterol biosynthetic process | 7.77E-05 |
| 9 | GO:0090391: granum assembly | 7.77E-05 |
| 10 | GO:0010027: thylakoid membrane organization | 1.11E-04 |
| 11 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.17E-04 |
| 12 | GO:0045454: cell redox homeostasis | 1.55E-04 |
| 13 | GO:0009765: photosynthesis, light harvesting | 1.61E-04 |
| 14 | GO:0006021: inositol biosynthetic process | 1.61E-04 |
| 15 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.09E-04 |
| 16 | GO:0046855: inositol phosphate dephosphorylation | 2.59E-04 |
| 17 | GO:0009854: oxidative photosynthetic carbon pathway | 3.11E-04 |
| 18 | GO:0010019: chloroplast-nucleus signaling pathway | 3.11E-04 |
| 19 | GO:0010196: nonphotochemical quenching | 3.66E-04 |
| 20 | GO:2000070: regulation of response to water deprivation | 4.23E-04 |
| 21 | GO:0015996: chlorophyll catabolic process | 4.82E-04 |
| 22 | GO:0007186: G-protein coupled receptor signaling pathway | 4.82E-04 |
| 23 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 6.68E-04 |
| 24 | GO:0042744: hydrogen peroxide catabolic process | 6.69E-04 |
| 25 | GO:0006790: sulfur compound metabolic process | 8.01E-04 |
| 26 | GO:0045037: protein import into chloroplast stroma | 8.01E-04 |
| 27 | GO:0050826: response to freezing | 8.70E-04 |
| 28 | GO:0010207: photosystem II assembly | 9.39E-04 |
| 29 | GO:0046854: phosphatidylinositol phosphorylation | 1.01E-03 |
| 30 | GO:0019853: L-ascorbic acid biosynthetic process | 1.01E-03 |
| 31 | GO:0006487: protein N-linked glycosylation | 1.16E-03 |
| 32 | GO:0048511: rhythmic process | 1.31E-03 |
| 33 | GO:0010182: sugar mediated signaling pathway | 1.82E-03 |
| 34 | GO:0042752: regulation of circadian rhythm | 1.91E-03 |
| 35 | GO:0071554: cell wall organization or biogenesis | 2.09E-03 |
| 36 | GO:0000302: response to reactive oxygen species | 2.09E-03 |
| 37 | GO:0015995: chlorophyll biosynthetic process | 2.99E-03 |
| 38 | GO:0018298: protein-chromophore linkage | 3.20E-03 |
| 39 | GO:0009834: plant-type secondary cell wall biogenesis | 3.42E-03 |
| 40 | GO:0009631: cold acclimation | 3.53E-03 |
| 41 | GO:0009853: photorespiration | 3.76E-03 |
| 42 | GO:0034599: cellular response to oxidative stress | 3.87E-03 |
| 43 | GO:0008643: carbohydrate transport | 4.71E-03 |
| 44 | GO:0009740: gibberellic acid mediated signaling pathway | 6.70E-03 |
| 45 | GO:0009739: response to gibberellin | 1.11E-02 |
| 46 | GO:0009860: pollen tube growth | 1.47E-02 |
| 47 | GO:0080167: response to karrikin | 1.62E-02 |
| 48 | GO:0009735: response to cytokinin | 3.02E-02 |
| 49 | GO:0009416: response to light stimulus | 3.22E-02 |
| 50 | GO:0009611: response to wounding | 3.27E-02 |
| 51 | GO:0055085: transmembrane transport | 3.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 2 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 3 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.67E-05 |
| 4 | GO:0052832: inositol monophosphate 3-phosphatase activity | 4.35E-05 |
| 5 | GO:0008934: inositol monophosphate 1-phosphatase activity | 4.35E-05 |
| 6 | GO:0052833: inositol monophosphate 4-phosphatase activity | 4.35E-05 |
| 7 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 1.17E-04 |
| 8 | GO:0043495: protein anchor | 1.61E-04 |
| 9 | GO:0016688: L-ascorbate peroxidase activity | 2.59E-04 |
| 10 | GO:0004130: cytochrome-c peroxidase activity | 2.59E-04 |
| 11 | GO:0051920: peroxiredoxin activity | 3.11E-04 |
| 12 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.11E-04 |
| 13 | GO:0051753: mannan synthase activity | 3.11E-04 |
| 14 | GO:0019899: enzyme binding | 3.66E-04 |
| 15 | GO:0030674: protein binding, bridging | 4.23E-04 |
| 16 | GO:0016209: antioxidant activity | 4.23E-04 |
| 17 | GO:0008794: arsenate reductase (glutaredoxin) activity | 7.34E-04 |
| 18 | GO:0004601: peroxidase activity | 1.21E-03 |
| 19 | GO:0022891: substrate-specific transmembrane transporter activity | 1.47E-03 |
| 20 | GO:0008514: organic anion transmembrane transporter activity | 1.56E-03 |
| 21 | GO:0016413: O-acetyltransferase activity | 2.57E-03 |
| 22 | GO:0016168: chlorophyll binding | 2.78E-03 |
| 23 | GO:0008375: acetylglucosaminyltransferase activity | 2.88E-03 |
| 24 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.71E-03 |
| 25 | GO:0015035: protein disulfide oxidoreductase activity | 7.13E-03 |
| 26 | GO:0005509: calcium ion binding | 7.13E-03 |
| 27 | GO:0042802: identical protein binding | 1.21E-02 |
| 28 | GO:0020037: heme binding | 1.22E-02 |
| 29 | GO:0043531: ADP binding | 1.49E-02 |
| 30 | GO:0009055: electron carrier activity | 2.25E-02 |
| 31 | GO:0005515: protein binding | 2.27E-02 |
| 32 | GO:0016757: transferase activity, transferring glycosyl groups | 2.64E-02 |
| 33 | GO:0046872: metal ion binding | 3.11E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 3.07E-15 |
| 3 | GO:0009534: chloroplast thylakoid | 5.45E-13 |
| 4 | GO:0009579: thylakoid | 3.07E-11 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 7.21E-09 |
| 6 | GO:0009507: chloroplast | 2.76E-08 |
| 7 | GO:0031977: thylakoid lumen | 6.23E-08 |
| 8 | GO:0009515: granal stacked thylakoid | 1.67E-05 |
| 9 | GO:0009654: photosystem II oxygen evolving complex | 2.85E-05 |
| 10 | GO:0009941: chloroplast envelope | 2.93E-05 |
| 11 | GO:0019898: extrinsic component of membrane | 6.79E-05 |
| 12 | GO:0009528: plastid inner membrane | 7.77E-05 |
| 13 | GO:0009527: plastid outer membrane | 1.61E-04 |
| 14 | GO:0016021: integral component of membrane | 2.61E-04 |
| 15 | GO:0009533: chloroplast stromal thylakoid | 3.66E-04 |
| 16 | GO:0009570: chloroplast stroma | 4.58E-04 |
| 17 | GO:0030095: chloroplast photosystem II | 9.39E-04 |
| 18 | GO:0042651: thylakoid membrane | 1.23E-03 |
| 19 | GO:0009532: plastid stroma | 1.31E-03 |
| 20 | GO:0009523: photosystem II | 2.00E-03 |
| 21 | GO:0010319: stromule | 2.48E-03 |
| 22 | GO:0009707: chloroplast outer membrane | 3.20E-03 |
| 23 | GO:0010287: plastoglobule | 7.87E-03 |
| 24 | GO:0031969: chloroplast membrane | 1.62E-02 |
| 25 | GO:0005794: Golgi apparatus | 4.00E-02 |