co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G62610

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051245: negative regulation of cellular defense response	0.00E+00
2	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
3	GO:0045792: negative regulation of cell size	0.00E+00
4	GO:1900367: positive regulation of defense response to insect	0.00E+00
5	GO:0042430: indole-containing compound metabolic process	0.00E+00
6	GO:0051553: flavone biosynthetic process	0.00E+00
7	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
8	GO:0071327: cellular response to trehalose stimulus	0.00E+00
9	GO:0006468: protein phosphorylation	8.57E-11
10	GO:0006952: defense response	1.67E-10
11	GO:0009816: defense response to bacterium, incompatible interaction	3.02E-09
12	GO:0010200: response to chitin	1.57E-08
13	GO:0042742: defense response to bacterium	6.04E-08
14	GO:0009626: plant-type hypersensitive response	2.93E-07
15	GO:0009617: response to bacterium	3.98E-07
16	GO:0080142: regulation of salicylic acid biosynthetic process	4.23E-07
17	GO:0010942: positive regulation of cell death	1.85E-06
18	GO:0031349: positive regulation of defense response	4.08E-06
19	GO:0051252: regulation of RNA metabolic process	4.08E-06
20	GO:0010618: aerenchyma formation	4.08E-06
21	GO:0007166: cell surface receptor signaling pathway	4.72E-06
22	GO:0043069: negative regulation of programmed cell death	2.76E-05
23	GO:0006612: protein targeting to membrane	3.26E-05
24	GO:0010363: regulation of plant-type hypersensitive response	5.85E-05
25	GO:0060548: negative regulation of cell death	5.85E-05
26	GO:0009627: systemic acquired resistance	7.06E-05
27	GO:0009620: response to fungus	7.18E-05
28	GO:0009751: response to salicylic acid	7.24E-05
29	GO:0050832: defense response to fungus	8.60E-05
30	GO:0010225: response to UV-C	9.24E-05
31	GO:0009863: salicylic acid mediated signaling pathway	1.09E-04
32	GO:0031348: negative regulation of defense response	1.66E-04
33	GO:0010310: regulation of hydrogen peroxide metabolic process	1.83E-04
34	GO:0051707: response to other organism	2.25E-04
35	GO:0070370: cellular heat acclimation	2.39E-04
36	GO:0009609: response to symbiotic bacterium	2.99E-04
37	GO:1990022: RNA polymerase III complex localization to nucleus	2.99E-04
38	GO:1901183: positive regulation of camalexin biosynthetic process	2.99E-04
39	GO:0044376: RNA polymerase II complex import to nucleus	2.99E-04
40	GO:0006643: membrane lipid metabolic process	2.99E-04
41	GO:0006680: glucosylceramide catabolic process	2.99E-04
42	GO:0060862: negative regulation of floral organ abscission	2.99E-04
43	GO:0046104: thymidine metabolic process	2.99E-04
44	GO:0061025: membrane fusion	3.23E-04
45	GO:0043562: cellular response to nitrogen levels	3.71E-04
46	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.71E-04
47	GO:0010193: response to ozone	3.87E-04
48	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.28E-04
49	GO:0006452: translational frameshifting	6.55E-04
50	GO:0006212: uracil catabolic process	6.55E-04
51	GO:0019483: beta-alanine biosynthetic process	6.55E-04
52	GO:0010541: acropetal auxin transport	6.55E-04
53	GO:0045905: positive regulation of translational termination	6.55E-04
54	GO:0002221: pattern recognition receptor signaling pathway	6.55E-04
55	GO:0015914: phospholipid transport	6.55E-04
56	GO:2000072: regulation of defense response to fungus, incompatible interaction	6.55E-04
57	GO:0045901: positive regulation of translational elongation	6.55E-04
58	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	6.55E-04
59	GO:0009838: abscission	6.55E-04
60	GO:0080185: effector dependent induction by symbiont of host immune response	6.55E-04
61	GO:0000266: mitochondrial fission	8.12E-04
62	GO:0044550: secondary metabolite biosynthetic process	1.01E-03
63	GO:0034605: cellular response to heat	1.03E-03
64	GO:0002237: response to molecule of bacterial origin	1.03E-03
65	GO:0048281: inflorescence morphogenesis	1.06E-03
66	GO:0010581: regulation of starch biosynthetic process	1.06E-03
67	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.06E-03
68	GO:1900140: regulation of seedling development	1.06E-03
69	GO:0055074: calcium ion homeostasis	1.06E-03
70	GO:0072661: protein targeting to plasma membrane	1.06E-03
71	GO:0042343: indole glucosinolate metabolic process	1.15E-03
72	GO:0010167: response to nitrate	1.15E-03
73	GO:0010053: root epidermal cell differentiation	1.15E-03
74	GO:0010150: leaf senescence	1.45E-03
75	GO:0006887: exocytosis	1.45E-03
76	GO:0043207: response to external biotic stimulus	1.52E-03
77	GO:0009399: nitrogen fixation	1.52E-03
78	GO:0010148: transpiration	1.52E-03
79	GO:0015696: ammonium transport	1.52E-03
80	GO:0002679: respiratory burst involved in defense response	1.52E-03
81	GO:0001676: long-chain fatty acid metabolic process	1.52E-03
82	GO:0048194: Golgi vesicle budding	1.52E-03
83	GO:0070301: cellular response to hydrogen peroxide	1.52E-03
84	GO:0002239: response to oomycetes	1.52E-03
85	GO:0048278: vesicle docking	1.72E-03
86	GO:0016998: cell wall macromolecule catabolic process	1.72E-03
87	GO:0098542: defense response to other organism	1.72E-03
88	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.88E-03
89	GO:0072488: ammonium transmembrane transport	2.04E-03
90	GO:0071897: DNA biosynthetic process	2.04E-03
91	GO:0010508: positive regulation of autophagy	2.04E-03
92	GO:0006542: glutamine biosynthetic process	2.04E-03
93	GO:0046345: abscisic acid catabolic process	2.04E-03
94	GO:0000304: response to singlet oxygen	2.61E-03
95	GO:0009697: salicylic acid biosynthetic process	2.61E-03
96	GO:0030041: actin filament polymerization	2.61E-03
97	GO:0046283: anthocyanin-containing compound metabolic process	2.61E-03
98	GO:0031365: N-terminal protein amino acid modification	2.61E-03
99	GO:1900425: negative regulation of defense response to bacterium	3.22E-03
100	GO:0006623: protein targeting to vacuole	3.24E-03
101	GO:0000302: response to reactive oxygen species	3.46E-03
102	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.87E-03
103	GO:0000911: cytokinesis by cell plate formation	3.87E-03
104	GO:0009612: response to mechanical stimulus	3.87E-03
105	GO:0010555: response to mannitol	3.87E-03
106	GO:2000067: regulation of root morphogenesis	3.87E-03
107	GO:0030163: protein catabolic process	3.94E-03
108	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.12E-03
109	GO:0071446: cellular response to salicylic acid stimulus	4.57E-03
110	GO:0010044: response to aluminum ion	4.57E-03
111	GO:0009610: response to symbiotic fungus	4.57E-03
112	GO:0046470: phosphatidylcholine metabolic process	4.57E-03
113	GO:0043090: amino acid import	4.57E-03
114	GO:0001666: response to hypoxia	5.00E-03
115	GO:0009787: regulation of abscisic acid-activated signaling pathway	5.30E-03
116	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.30E-03
117	GO:0030162: regulation of proteolysis	5.30E-03
118	GO:1900150: regulation of defense response to fungus	5.30E-03
119	GO:0016559: peroxisome fission	5.30E-03
120	GO:0006886: intracellular protein transport	5.39E-03
121	GO:0006906: vesicle fusion	5.59E-03
122	GO:0042128: nitrate assimilation	5.59E-03
123	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	6.08E-03
124	GO:0007186: G-protein coupled receptor signaling pathway	6.08E-03
125	GO:0010497: plasmodesmata-mediated intercellular transport	6.08E-03
126	GO:0010120: camalexin biosynthetic process	6.08E-03
127	GO:0010204: defense response signaling pathway, resistance gene-independent	6.08E-03
128	GO:0006002: fructose 6-phosphate metabolic process	6.08E-03
129	GO:0009817: defense response to fungus, incompatible interaction	6.53E-03
130	GO:0008219: cell death	6.53E-03
131	GO:0009821: alkaloid biosynthetic process	6.89E-03
132	GO:0051865: protein autoubiquitination	6.89E-03
133	GO:0010112: regulation of systemic acquired resistance	6.89E-03
134	GO:0046685: response to arsenic-containing substance	6.89E-03
135	GO:0010119: regulation of stomatal movement	7.55E-03
136	GO:2000280: regulation of root development	7.74E-03
137	GO:1900426: positive regulation of defense response to bacterium	7.74E-03
138	GO:0009867: jasmonic acid mediated signaling pathway	8.28E-03
139	GO:0006995: cellular response to nitrogen starvation	8.62E-03
140	GO:0009870: defense response signaling pathway, resistance gene-dependent	8.62E-03
141	GO:0006032: chitin catabolic process	8.62E-03
142	GO:0010215: cellulose microfibril organization	8.62E-03
143	GO:0009750: response to fructose	9.55E-03
144	GO:0030148: sphingolipid biosynthetic process	9.55E-03
145	GO:0012501: programmed cell death	1.05E-02
146	GO:0002213: defense response to insect	1.05E-02
147	GO:0015706: nitrate transport	1.05E-02
148	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.05E-02
149	GO:0071365: cellular response to auxin stimulus	1.05E-02
150	GO:0006807: nitrogen compound metabolic process	1.15E-02
151	GO:0006302: double-strand break repair	1.25E-02
152	GO:0031347: regulation of defense response	1.30E-02
153	GO:0070588: calcium ion transmembrane transport	1.36E-02
154	GO:0009969: xyloglucan biosynthetic process	1.36E-02
155	GO:0006970: response to osmotic stress	1.41E-02
156	GO:0006979: response to oxidative stress	1.63E-02
157	GO:0006874: cellular calcium ion homeostasis	1.69E-02
158	GO:0006508: proteolysis	1.78E-02
159	GO:0016192: vesicle-mediated transport	1.80E-02
160	GO:0009814: defense response, incompatible interaction	1.93E-02
161	GO:0030433: ubiquitin-dependent ERAD pathway	1.93E-02
162	GO:0007005: mitochondrion organization	1.93E-02
163	GO:0071456: cellular response to hypoxia	1.93E-02
164	GO:0009411: response to UV	2.05E-02
165	GO:0009625: response to insect	2.05E-02
166	GO:0007165: signal transduction	2.13E-02
167	GO:0010089: xylem development	2.18E-02
168	GO:0009737: response to abscisic acid	2.22E-02
169	GO:0015031: protein transport	2.42E-02
170	GO:0042391: regulation of membrane potential	2.44E-02
171	GO:0008360: regulation of cell shape	2.57E-02
172	GO:0010197: polar nucleus fusion	2.57E-02
173	GO:0009409: response to cold	2.69E-02
174	GO:0010183: pollen tube guidance	2.85E-02
175	GO:0009749: response to glucose	2.85E-02
176	GO:0002229: defense response to oomycetes	2.99E-02
177	GO:0006891: intra-Golgi vesicle-mediated transport	2.99E-02
178	GO:0016032: viral process	3.13E-02
179	GO:0006904: vesicle docking involved in exocytosis	3.58E-02
180	GO:0051607: defense response to virus	3.73E-02
181	GO:0009615: response to virus	3.88E-02
182	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.98E-02
183	GO:0016049: cell growth	4.52E-02
184	GO:0009813: flavonoid biosynthetic process	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0003837: beta-ureidopropionase activity	0.00E+00
2	GO:0033759: flavone synthase activity	0.00E+00
3	GO:0015370: solute:sodium symporter activity	0.00E+00
4	GO:0005524: ATP binding	8.08E-11
5	GO:0016301: kinase activity	2.14E-10
6	GO:0004713: protein tyrosine kinase activity	5.08E-07
7	GO:0004674: protein serine/threonine kinase activity	5.90E-07
8	GO:0008428: ribonuclease inhibitor activity	4.08E-06
9	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	4.08E-06
10	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.88E-05
11	GO:0004190: aspartic-type endopeptidase activity	7.89E-05
12	GO:0008948: oxaloacetate decarboxylase activity	9.24E-05
13	GO:0005515: protein binding	1.52E-04
14	GO:0004012: phospholipid-translocating ATPase activity	1.83E-04
15	GO:0080042: ADP-glucose pyrophosphohydrolase activity	2.99E-04
16	GO:0004797: thymidine kinase activity	2.99E-04
17	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.99E-04
18	GO:0004348: glucosylceramidase activity	2.99E-04
19	GO:1901149: salicylic acid binding	2.99E-04
20	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.02E-04
21	GO:0017110: nucleoside-diphosphatase activity	6.55E-04
22	GO:0045140: inositol phosphoceramide synthase activity	6.55E-04
23	GO:0080041: ADP-ribose pyrophosphohydrolase activity	6.55E-04
24	GO:0005516: calmodulin binding	8.30E-04
25	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.19E-04
26	GO:0031683: G-protein beta/gamma-subunit complex binding	1.06E-03
27	GO:0001664: G-protein coupled receptor binding	1.06E-03
28	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.17E-03
29	GO:0004672: protein kinase activity	1.20E-03
30	GO:0004871: signal transducer activity	1.29E-03
31	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.36E-03
32	GO:0005484: SNAP receptor activity	1.61E-03
33	GO:0033612: receptor serine/threonine kinase binding	1.72E-03
34	GO:0043495: protein anchor	2.04E-03
35	GO:0015204: urea transmembrane transporter activity	2.04E-03
36	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.61E-03
37	GO:0047631: ADP-ribose diphosphatase activity	2.61E-03
38	GO:0004356: glutamate-ammonia ligase activity	2.61E-03
39	GO:0010294: abscisic acid glucosyltransferase activity	2.61E-03
40	GO:0031625: ubiquitin protein ligase binding	2.67E-03
41	GO:0000210: NAD+ diphosphatase activity	3.22E-03
42	GO:0008519: ammonium transmembrane transporter activity	3.22E-03
43	GO:0102391: decanoate--CoA ligase activity	3.87E-03
44	GO:0004656: procollagen-proline 4-dioxygenase activity	3.87E-03
45	GO:0005509: calcium ion binding	4.40E-03
46	GO:0003872: 6-phosphofructokinase activity	4.57E-03
47	GO:0004467: long-chain fatty acid-CoA ligase activity	4.57E-03
48	GO:0008235: metalloexopeptidase activity	4.57E-03
49	GO:0005506: iron ion binding	4.99E-03
50	GO:0043022: ribosome binding	5.30E-03
51	GO:0004806: triglyceride lipase activity	5.89E-03
52	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	6.08E-03
53	GO:0003843: 1,3-beta-D-glucan synthase activity	6.08E-03
54	GO:0004630: phospholipase D activity	6.08E-03
55	GO:0045309: protein phosphorylated amino acid binding	7.74E-03
56	GO:0016844: strictosidine synthase activity	7.74E-03
57	GO:0015112: nitrate transmembrane transporter activity	7.74E-03
58	GO:0004568: chitinase activity	8.62E-03
59	GO:0019825: oxygen binding	8.76E-03
60	GO:0000149: SNARE binding	9.05E-03
61	GO:0004712: protein serine/threonine/tyrosine kinase activity	9.05E-03
62	GO:0019904: protein domain specific binding	9.55E-03
63	GO:0004177: aminopeptidase activity	9.55E-03
64	GO:0005388: calcium-transporting ATPase activity	1.15E-02
65	GO:0031072: heat shock protein binding	1.15E-02
66	GO:0005262: calcium channel activity	1.15E-02
67	GO:0015293: symporter activity	1.20E-02
68	GO:0008061: chitin binding	1.36E-02
69	GO:0003712: transcription cofactor activity	1.36E-02
70	GO:0005217: intracellular ligand-gated ion channel activity	1.36E-02
71	GO:0004970: ionotropic glutamate receptor activity	1.36E-02
72	GO:0030552: cAMP binding	1.36E-02
73	GO:0030553: cGMP binding	1.36E-02
74	GO:0016887: ATPase activity	1.37E-02
75	GO:0016298: lipase activity	1.50E-02
76	GO:0031418: L-ascorbic acid binding	1.58E-02
77	GO:0003954: NADH dehydrogenase activity	1.58E-02
78	GO:0005216: ion channel activity	1.69E-02
79	GO:0046872: metal ion binding	1.85E-02
80	GO:0051082: unfolded protein binding	2.06E-02
81	GO:0042803: protein homodimerization activity	2.25E-02
82	GO:0030551: cyclic nucleotide binding	2.44E-02
83	GO:0005249: voltage-gated potassium channel activity	2.44E-02
84	GO:0008080: N-acetyltransferase activity	2.57E-02
85	GO:0001085: RNA polymerase II transcription factor binding	2.57E-02
86	GO:0003924: GTPase activity	2.76E-02
87	GO:0020037: heme binding	3.47E-02
88	GO:0016597: amino acid binding	3.73E-02
89	GO:0051213: dioxygenase activity	3.88E-02
90	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.20E-02
91	GO:0004683: calmodulin-dependent protein kinase activity	4.36E-02
92	GO:0042802: identical protein binding	4.51E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.01E-19
2	GO:0016021: integral component of membrane	3.33E-09
3	GO:0009506: plasmodesma	2.00E-05
4	GO:0005911: cell-cell junction	2.99E-04
5	GO:0009504: cell plate	3.54E-04
6	GO:0017119: Golgi transport complex	6.16E-04
7	GO:0031304: intrinsic component of mitochondrial inner membrane	6.55E-04
8	GO:0005901: caveola	6.55E-04
9	GO:0031902: late endosome membrane	1.45E-03
10	GO:0030658: transport vesicle membrane	1.52E-03
11	GO:0070062: extracellular exosome	1.52E-03
12	GO:0005741: mitochondrial outer membrane	1.72E-03
13	GO:0005945: 6-phosphofructokinase complex	2.61E-03
14	GO:0005887: integral component of plasma membrane	2.96E-03
15	GO:0005802: trans-Golgi network	3.25E-03
16	GO:0000148: 1,3-beta-D-glucan synthase complex	6.08E-03
17	GO:0019005: SCF ubiquitin ligase complex	6.53E-03
18	GO:0030665: clathrin-coated vesicle membrane	7.74E-03
19	GO:0005740: mitochondrial envelope	8.62E-03
20	GO:0005783: endoplasmic reticulum	8.86E-03
21	GO:0031201: SNARE complex	9.85E-03
22	GO:0031012: extracellular matrix	1.15E-02
23	GO:0005789: endoplasmic reticulum membrane	1.18E-02
24	GO:0005795: Golgi stack	1.36E-02
25	GO:0005737: cytoplasm	1.39E-02
26	GO:0005834: heterotrimeric G-protein complex	1.82E-02
27	GO:0005794: Golgi apparatus	2.61E-02
28	GO:0019898: extrinsic component of membrane	2.85E-02
29	GO:0000145: exocyst	3.13E-02
30	GO:0031225: anchored component of membrane	3.25E-02
31	GO:0005778: peroxisomal membrane	3.58E-02
32	GO:0016020: membrane	3.71E-02
33	GO:0005788: endoplasmic reticulum lumen	4.04E-02
34	GO:0005667: transcription factor complex	4.20E-02
35	GO:0000151: ubiquitin ligase complex	4.69E-02
36	GO:0046658: anchored component of plasma membrane	4.70E-02