GO Enrichment Analysis of Co-expressed Genes with
AT5G62430
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 2 | GO:0010430: fatty acid omega-oxidation | 0.00E+00 |
| 3 | GO:0042493: response to drug | 0.00E+00 |
| 4 | GO:0042335: cuticle development | 1.14E-05 |
| 5 | GO:0010583: response to cyclopentenone | 2.40E-05 |
| 6 | GO:0006633: fatty acid biosynthetic process | 1.69E-04 |
| 7 | GO:0042546: cell wall biogenesis | 1.90E-04 |
| 8 | GO:0010444: guard mother cell differentiation | 2.07E-04 |
| 9 | GO:0043007: maintenance of rDNA | 2.72E-04 |
| 10 | GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway | 2.72E-04 |
| 11 | GO:0071588: hydrogen peroxide mediated signaling pathway | 2.72E-04 |
| 12 | GO:0060627: regulation of vesicle-mediated transport | 2.72E-04 |
| 13 | GO:0046520: sphingoid biosynthetic process | 2.72E-04 |
| 14 | GO:0071555: cell wall organization | 3.32E-04 |
| 15 | GO:0007267: cell-cell signaling | 4.51E-04 |
| 16 | GO:0006695: cholesterol biosynthetic process | 5.99E-04 |
| 17 | GO:0010115: regulation of abscisic acid biosynthetic process | 5.99E-04 |
| 18 | GO:0045717: negative regulation of fatty acid biosynthetic process | 5.99E-04 |
| 19 | GO:0000038: very long-chain fatty acid metabolic process | 6.22E-04 |
| 20 | GO:0010411: xyloglucan metabolic process | 6.44E-04 |
| 21 | GO:1902448: positive regulation of shade avoidance | 9.72E-04 |
| 22 | GO:0046168: glycerol-3-phosphate catabolic process | 9.72E-04 |
| 23 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 9.72E-04 |
| 24 | GO:0006833: water transport | 1.12E-03 |
| 25 | GO:0051639: actin filament network formation | 1.39E-03 |
| 26 | GO:0006072: glycerol-3-phosphate metabolic process | 1.39E-03 |
| 27 | GO:0009650: UV protection | 1.39E-03 |
| 28 | GO:0010731: protein glutathionylation | 1.39E-03 |
| 29 | GO:0009413: response to flooding | 1.39E-03 |
| 30 | GO:0051764: actin crosslink formation | 1.86E-03 |
| 31 | GO:0006183: GTP biosynthetic process | 1.86E-03 |
| 32 | GO:0000919: cell plate assembly | 1.86E-03 |
| 33 | GO:0019722: calcium-mediated signaling | 1.94E-03 |
| 34 | GO:0034220: ion transmembrane transport | 2.27E-03 |
| 35 | GO:0016123: xanthophyll biosynthetic process | 2.37E-03 |
| 36 | GO:0006465: signal peptide processing | 2.37E-03 |
| 37 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.37E-03 |
| 38 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.93E-03 |
| 39 | GO:0006561: proline biosynthetic process | 2.93E-03 |
| 40 | GO:0010405: arabinogalactan protein metabolic process | 2.93E-03 |
| 41 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.33E-03 |
| 42 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 3.52E-03 |
| 43 | GO:0042372: phylloquinone biosynthetic process | 3.52E-03 |
| 44 | GO:0006694: steroid biosynthetic process | 3.52E-03 |
| 45 | GO:0010019: chloroplast-nucleus signaling pathway | 3.52E-03 |
| 46 | GO:0030497: fatty acid elongation | 4.15E-03 |
| 47 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 4.15E-03 |
| 48 | GO:0071669: plant-type cell wall organization or biogenesis | 4.15E-03 |
| 49 | GO:0045454: cell redox homeostasis | 4.17E-03 |
| 50 | GO:0007155: cell adhesion | 4.82E-03 |
| 51 | GO:0009690: cytokinin metabolic process | 4.82E-03 |
| 52 | GO:0016042: lipid catabolic process | 5.48E-03 |
| 53 | GO:0009808: lignin metabolic process | 5.52E-03 |
| 54 | GO:0009932: cell tip growth | 5.52E-03 |
| 55 | GO:0032544: plastid translation | 5.52E-03 |
| 56 | GO:0000160: phosphorelay signal transduction system | 5.97E-03 |
| 57 | GO:0045490: pectin catabolic process | 6.18E-03 |
| 58 | GO:0045337: farnesyl diphosphate biosynthetic process | 6.25E-03 |
| 59 | GO:0033384: geranyl diphosphate biosynthetic process | 6.25E-03 |
| 60 | GO:0000902: cell morphogenesis | 6.25E-03 |
| 61 | GO:0009638: phototropism | 7.03E-03 |
| 62 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 7.82E-03 |
| 63 | GO:0006535: cysteine biosynthetic process from serine | 7.82E-03 |
| 64 | GO:0009688: abscisic acid biosynthetic process | 7.82E-03 |
| 65 | GO:0043069: negative regulation of programmed cell death | 7.82E-03 |
| 66 | GO:0006631: fatty acid metabolic process | 8.57E-03 |
| 67 | GO:0006415: translational termination | 8.66E-03 |
| 68 | GO:0009750: response to fructose | 8.66E-03 |
| 69 | GO:0005975: carbohydrate metabolic process | 8.86E-03 |
| 70 | GO:0016024: CDP-diacylglycerol biosynthetic process | 9.52E-03 |
| 71 | GO:0008643: carbohydrate transport | 1.01E-02 |
| 72 | GO:0050826: response to freezing | 1.04E-02 |
| 73 | GO:0042254: ribosome biogenesis | 1.10E-02 |
| 74 | GO:0010143: cutin biosynthetic process | 1.13E-02 |
| 75 | GO:0010207: photosystem II assembly | 1.13E-02 |
| 76 | GO:0007034: vacuolar transport | 1.13E-02 |
| 77 | GO:0042538: hyperosmotic salinity response | 1.17E-02 |
| 78 | GO:0009735: response to cytokinin | 1.19E-02 |
| 79 | GO:0009414: response to water deprivation | 1.22E-02 |
| 80 | GO:0009969: xyloglucan biosynthetic process | 1.23E-02 |
| 81 | GO:0010030: positive regulation of seed germination | 1.23E-02 |
| 82 | GO:0007049: cell cycle | 1.24E-02 |
| 83 | GO:0009736: cytokinin-activated signaling pathway | 1.26E-02 |
| 84 | GO:0010025: wax biosynthetic process | 1.33E-02 |
| 85 | GO:0005992: trehalose biosynthetic process | 1.43E-02 |
| 86 | GO:0019344: cysteine biosynthetic process | 1.43E-02 |
| 87 | GO:0051017: actin filament bundle assembly | 1.43E-02 |
| 88 | GO:0007017: microtubule-based process | 1.53E-02 |
| 89 | GO:0016998: cell wall macromolecule catabolic process | 1.64E-02 |
| 90 | GO:0009624: response to nematode | 1.79E-02 |
| 91 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.86E-02 |
| 92 | GO:0009411: response to UV | 1.86E-02 |
| 93 | GO:0051726: regulation of cell cycle | 1.90E-02 |
| 94 | GO:0042127: regulation of cell proliferation | 1.97E-02 |
| 95 | GO:0006869: lipid transport | 2.00E-02 |
| 96 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.09E-02 |
| 97 | GO:0042631: cellular response to water deprivation | 2.21E-02 |
| 98 | GO:0000271: polysaccharide biosynthetic process | 2.21E-02 |
| 99 | GO:0000413: protein peptidyl-prolyl isomerization | 2.21E-02 |
| 100 | GO:0010305: leaf vascular tissue pattern formation | 2.33E-02 |
| 101 | GO:0010182: sugar mediated signaling pathway | 2.33E-02 |
| 102 | GO:0042744: hydrogen peroxide catabolic process | 2.56E-02 |
| 103 | GO:0016132: brassinosteroid biosynthetic process | 2.71E-02 |
| 104 | GO:0071554: cell wall organization or biogenesis | 2.71E-02 |
| 105 | GO:0000302: response to reactive oxygen species | 2.71E-02 |
| 106 | GO:0032502: developmental process | 2.84E-02 |
| 107 | GO:0040008: regulation of growth | 2.96E-02 |
| 108 | GO:1901657: glycosyl compound metabolic process | 2.97E-02 |
| 109 | GO:0009567: double fertilization forming a zygote and endosperm | 3.10E-02 |
| 110 | GO:0009828: plant-type cell wall loosening | 3.10E-02 |
| 111 | GO:0051607: defense response to virus | 3.38E-02 |
| 112 | GO:0009739: response to gibberellin | 3.47E-02 |
| 113 | GO:0016126: sterol biosynthetic process | 3.52E-02 |
| 114 | GO:0010027: thylakoid membrane organization | 3.52E-02 |
| 115 | GO:0007166: cell surface receptor signaling pathway | 3.55E-02 |
| 116 | GO:0042128: nitrate assimilation | 3.80E-02 |
| 117 | GO:0015995: chlorophyll biosynthetic process | 3.95E-02 |
| 118 | GO:0016311: dephosphorylation | 4.10E-02 |
| 119 | GO:0055114: oxidation-reduction process | 4.17E-02 |
| 120 | GO:0030244: cellulose biosynthetic process | 4.25E-02 |
| 121 | GO:0009813: flavonoid biosynthetic process | 4.40E-02 |
| 122 | GO:0009832: plant-type cell wall biogenesis | 4.40E-02 |
| 123 | GO:0009834: plant-type secondary cell wall biogenesis | 4.55E-02 |
| 124 | GO:0009407: toxin catabolic process | 4.55E-02 |
| 125 | GO:0009733: response to auxin | 4.57E-02 |
| 126 | GO:0009826: unidimensional cell growth | 4.60E-02 |
| 127 | GO:0009631: cold acclimation | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005048: signal sequence binding | 0.00E+00 |
| 2 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 3 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 4 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 5 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 6 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 7 | GO:0005528: FK506 binding | 8.91E-05 |
| 8 | GO:0051753: mannan synthase activity | 1.58E-04 |
| 9 | GO:0052689: carboxylic ester hydrolase activity | 1.59E-04 |
| 10 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.31E-04 |
| 11 | GO:0000170: sphingosine hydroxylase activity | 2.72E-04 |
| 12 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 2.72E-04 |
| 13 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 2.72E-04 |
| 14 | GO:0080132: fatty acid alpha-hydroxylase activity | 2.72E-04 |
| 15 | GO:0009374: biotin binding | 2.72E-04 |
| 16 | GO:0004328: formamidase activity | 2.72E-04 |
| 17 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.24E-04 |
| 18 | GO:0003938: IMP dehydrogenase activity | 5.99E-04 |
| 19 | GO:0042284: sphingolipid delta-4 desaturase activity | 5.99E-04 |
| 20 | GO:0046593: mandelonitrile lyase activity | 5.99E-04 |
| 21 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 5.99E-04 |
| 22 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 6.44E-04 |
| 23 | GO:0008378: galactosyltransferase activity | 7.11E-04 |
| 24 | GO:0004148: dihydrolipoyl dehydrogenase activity | 9.72E-04 |
| 25 | GO:0005504: fatty acid binding | 9.72E-04 |
| 26 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 9.72E-04 |
| 27 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 9.72E-04 |
| 28 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.12E-03 |
| 29 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.12E-03 |
| 30 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.12E-03 |
| 31 | GO:0004857: enzyme inhibitor activity | 1.24E-03 |
| 32 | GO:0001872: (1->3)-beta-D-glucan binding | 1.39E-03 |
| 33 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.39E-03 |
| 34 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.39E-03 |
| 35 | GO:0016851: magnesium chelatase activity | 1.39E-03 |
| 36 | GO:0016149: translation release factor activity, codon specific | 1.39E-03 |
| 37 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.39E-03 |
| 38 | GO:0030570: pectate lyase activity | 1.79E-03 |
| 39 | GO:0016836: hydro-lyase activity | 1.86E-03 |
| 40 | GO:0052793: pectin acetylesterase activity | 1.86E-03 |
| 41 | GO:0045430: chalcone isomerase activity | 1.86E-03 |
| 42 | GO:0046527: glucosyltransferase activity | 1.86E-03 |
| 43 | GO:0016788: hydrolase activity, acting on ester bonds | 2.35E-03 |
| 44 | GO:0003989: acetyl-CoA carboxylase activity | 2.37E-03 |
| 45 | GO:0009922: fatty acid elongase activity | 2.37E-03 |
| 46 | GO:0004650: polygalacturonase activity | 2.75E-03 |
| 47 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.93E-03 |
| 48 | GO:0004130: cytochrome-c peroxidase activity | 2.93E-03 |
| 49 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.93E-03 |
| 50 | GO:0016208: AMP binding | 2.93E-03 |
| 51 | GO:0016688: L-ascorbate peroxidase activity | 2.93E-03 |
| 52 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.93E-03 |
| 53 | GO:0000156: phosphorelay response regulator activity | 3.43E-03 |
| 54 | GO:0004124: cysteine synthase activity | 3.52E-03 |
| 55 | GO:0051920: peroxiredoxin activity | 3.52E-03 |
| 56 | GO:0016832: aldehyde-lyase activity | 3.52E-03 |
| 57 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.88E-03 |
| 58 | GO:0015250: water channel activity | 4.36E-03 |
| 59 | GO:0016209: antioxidant activity | 4.82E-03 |
| 60 | GO:0008312: 7S RNA binding | 4.82E-03 |
| 61 | GO:0003924: GTPase activity | 5.73E-03 |
| 62 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 6.02E-03 |
| 63 | GO:0003747: translation release factor activity | 6.25E-03 |
| 64 | GO:0004337: geranyltranstransferase activity | 6.25E-03 |
| 65 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 6.27E-03 |
| 66 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 6.57E-03 |
| 67 | GO:0004805: trehalose-phosphatase activity | 7.82E-03 |
| 68 | GO:0004161: dimethylallyltranstransferase activity | 8.66E-03 |
| 69 | GO:0008794: arsenate reductase (glutaredoxin) activity | 8.66E-03 |
| 70 | GO:0004364: glutathione transferase activity | 8.93E-03 |
| 71 | GO:0008289: lipid binding | 9.46E-03 |
| 72 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.04E-02 |
| 73 | GO:0051119: sugar transmembrane transporter activity | 1.23E-02 |
| 74 | GO:0016746: transferase activity, transferring acyl groups | 1.85E-02 |
| 75 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.86E-02 |
| 76 | GO:0008514: organic anion transmembrane transporter activity | 1.97E-02 |
| 77 | GO:0016491: oxidoreductase activity | 2.03E-02 |
| 78 | GO:0016758: transferase activity, transferring hexosyl groups | 2.19E-02 |
| 79 | GO:0019843: rRNA binding | 2.25E-02 |
| 80 | GO:0005507: copper ion binding | 2.32E-02 |
| 81 | GO:0016829: lyase activity | 2.43E-02 |
| 82 | GO:0009055: electron carrier activity | 2.53E-02 |
| 83 | GO:0019901: protein kinase binding | 2.58E-02 |
| 84 | GO:0005525: GTP binding | 2.87E-02 |
| 85 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.89E-02 |
| 86 | GO:0051015: actin filament binding | 2.97E-02 |
| 87 | GO:0016791: phosphatase activity | 3.10E-02 |
| 88 | GO:0005200: structural constituent of cytoskeleton | 3.24E-02 |
| 89 | GO:0016413: O-acetyltransferase activity | 3.38E-02 |
| 90 | GO:0016597: amino acid binding | 3.38E-02 |
| 91 | GO:0102483: scopolin beta-glucosidase activity | 3.95E-02 |
| 92 | GO:0030247: polysaccharide binding | 3.95E-02 |
| 93 | GO:0003824: catalytic activity | 4.43E-02 |
| 94 | GO:0030145: manganese ion binding | 4.71E-02 |
| 95 | GO:0004601: peroxidase activity | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031225: anchored component of membrane | 4.06E-11 |
| 2 | GO:0046658: anchored component of plasma membrane | 5.14E-11 |
| 3 | GO:0005576: extracellular region | 2.85E-07 |
| 4 | GO:0048046: apoplast | 5.86E-06 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 9.76E-06 |
| 6 | GO:0009570: chloroplast stroma | 2.95E-05 |
| 7 | GO:0009505: plant-type cell wall | 3.36E-05 |
| 8 | GO:0005886: plasma membrane | 5.47E-05 |
| 9 | GO:0009534: chloroplast thylakoid | 7.81E-05 |
| 10 | GO:0005618: cell wall | 1.51E-04 |
| 11 | GO:0031977: thylakoid lumen | 1.54E-04 |
| 12 | GO:0005787: signal peptidase complex | 2.72E-04 |
| 13 | GO:0080085: signal recognition particle, chloroplast targeting | 5.99E-04 |
| 14 | GO:0009941: chloroplast envelope | 7.86E-04 |
| 15 | GO:0010007: magnesium chelatase complex | 9.72E-04 |
| 16 | GO:0009509: chromoplast | 9.72E-04 |
| 17 | GO:0009317: acetyl-CoA carboxylase complex | 9.72E-04 |
| 18 | GO:0032432: actin filament bundle | 1.39E-03 |
| 19 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 1.39E-03 |
| 20 | GO:0000815: ESCRT III complex | 3.52E-03 |
| 21 | GO:0016020: membrane | 3.66E-03 |
| 22 | GO:0009533: chloroplast stromal thylakoid | 4.15E-03 |
| 23 | GO:0009579: thylakoid | 5.07E-03 |
| 24 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 5.52E-03 |
| 25 | GO:0045298: tubulin complex | 6.25E-03 |
| 26 | GO:0009507: chloroplast | 6.51E-03 |
| 27 | GO:0005773: vacuole | 7.24E-03 |
| 28 | GO:0005884: actin filament | 8.66E-03 |
| 29 | GO:0030095: chloroplast photosystem II | 1.13E-02 |
| 30 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.23E-02 |
| 31 | GO:0009654: photosystem II oxygen evolving complex | 1.53E-02 |
| 32 | GO:0005794: Golgi apparatus | 1.74E-02 |
| 33 | GO:0009535: chloroplast thylakoid membrane | 1.87E-02 |
| 34 | GO:0016021: integral component of membrane | 2.06E-02 |
| 35 | GO:0000139: Golgi membrane | 2.13E-02 |
| 36 | GO:0019898: extrinsic component of membrane | 2.58E-02 |
| 37 | GO:0009506: plasmodesma | 3.19E-02 |
| 38 | GO:0009295: nucleoid | 3.24E-02 |
| 39 | GO:0005778: peroxisomal membrane | 3.24E-02 |
| 40 | GO:0005768: endosome | 3.33E-02 |
| 41 | GO:0005887: integral component of plasma membrane | 3.40E-02 |
| 42 | GO:0005774: vacuolar membrane | 4.20E-02 |
| 43 | GO:0000151: ubiquitin ligase complex | 4.25E-02 |