GO Enrichment Analysis of Co-expressed Genes with
AT5G62350
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 2 | GO:0015979: photosynthesis | 1.34E-07 |
| 3 | GO:0044262: cellular carbohydrate metabolic process | 4.31E-05 |
| 4 | GO:0006106: fumarate metabolic process | 4.31E-05 |
| 5 | GO:0009773: photosynthetic electron transport in photosystem I | 4.36E-05 |
| 6 | GO:0045493: xylan catabolic process | 1.84E-04 |
| 7 | GO:0009409: response to cold | 2.42E-04 |
| 8 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.70E-04 |
| 9 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 2.70E-04 |
| 10 | GO:0010109: regulation of photosynthesis | 3.64E-04 |
| 11 | GO:0009765: photosynthesis, light harvesting | 3.64E-04 |
| 12 | GO:0009645: response to low light intensity stimulus | 7.90E-04 |
| 13 | GO:0009769: photosynthesis, light harvesting in photosystem II | 7.90E-04 |
| 14 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 9.08E-04 |
| 15 | GO:0010206: photosystem II repair | 1.16E-03 |
| 16 | GO:0010015: root morphogenesis | 1.57E-03 |
| 17 | GO:0006108: malate metabolic process | 1.87E-03 |
| 18 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.70E-03 |
| 19 | GO:0007017: microtubule-based process | 2.70E-03 |
| 20 | GO:0048511: rhythmic process | 2.88E-03 |
| 21 | GO:0061077: chaperone-mediated protein folding | 2.88E-03 |
| 22 | GO:0009269: response to desiccation | 2.88E-03 |
| 23 | GO:0006012: galactose metabolic process | 3.24E-03 |
| 24 | GO:0042752: regulation of circadian rhythm | 4.23E-03 |
| 25 | GO:0000302: response to reactive oxygen species | 4.64E-03 |
| 26 | GO:0042742: defense response to bacterium | 4.79E-03 |
| 27 | GO:0045454: cell redox homeostasis | 5.75E-03 |
| 28 | GO:0006869: lipid transport | 6.30E-03 |
| 29 | GO:0009627: systemic acquired resistance | 6.45E-03 |
| 30 | GO:0042128: nitrate assimilation | 6.45E-03 |
| 31 | GO:0010411: xyloglucan metabolic process | 6.69E-03 |
| 32 | GO:0018298: protein-chromophore linkage | 7.19E-03 |
| 33 | GO:0009817: defense response to fungus, incompatible interaction | 7.19E-03 |
| 34 | GO:0055114: oxidation-reduction process | 7.39E-03 |
| 35 | GO:0009407: toxin catabolic process | 7.69E-03 |
| 36 | GO:0010218: response to far red light | 7.69E-03 |
| 37 | GO:0007568: aging | 7.95E-03 |
| 38 | GO:0009631: cold acclimation | 7.95E-03 |
| 39 | GO:0009637: response to blue light | 8.47E-03 |
| 40 | GO:0034599: cellular response to oxidative stress | 8.74E-03 |
| 41 | GO:0006099: tricarboxylic acid cycle | 8.74E-03 |
| 42 | GO:0010114: response to red light | 1.01E-02 |
| 43 | GO:0009644: response to high light intensity | 1.07E-02 |
| 44 | GO:0009636: response to toxic substance | 1.10E-02 |
| 45 | GO:0009735: response to cytokinin | 1.15E-02 |
| 46 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.28E-02 |
| 47 | GO:0009624: response to nematode | 1.60E-02 |
| 48 | GO:0042744: hydrogen peroxide catabolic process | 2.06E-02 |
| 49 | GO:0007623: circadian rhythm | 2.36E-02 |
| 50 | GO:0006810: transport | 3.75E-02 |
| 51 | GO:0080167: response to karrikin | 3.76E-02 |
| 52 | GO:0005975: carbohydrate metabolic process | 3.87E-02 |
| 53 | GO:0016042: lipid catabolic process | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 2 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 3 | GO:0051920: peroxiredoxin activity | 8.18E-06 |
| 4 | GO:0016209: antioxidant activity | 1.51E-05 |
| 5 | GO:0004333: fumarate hydratase activity | 4.31E-05 |
| 6 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 4.31E-05 |
| 7 | GO:0004750: ribulose-phosphate 3-epimerase activity | 1.07E-04 |
| 8 | GO:0004324: ferredoxin-NADP+ reductase activity | 1.84E-04 |
| 9 | GO:0009044: xylan 1,4-beta-xylosidase activity | 3.64E-04 |
| 10 | GO:0046556: alpha-L-arabinofuranosidase activity | 3.64E-04 |
| 11 | GO:0080032: methyl jasmonate esterase activity | 3.64E-04 |
| 12 | GO:0004601: peroxidase activity | 4.55E-04 |
| 13 | GO:0003959: NADPH dehydrogenase activity | 4.63E-04 |
| 14 | GO:0004130: cytochrome-c peroxidase activity | 5.67E-04 |
| 15 | GO:0004602: glutathione peroxidase activity | 6.76E-04 |
| 16 | GO:0004034: aldose 1-epimerase activity | 9.08E-04 |
| 17 | GO:0044183: protein binding involved in protein folding | 1.57E-03 |
| 18 | GO:0031072: heat shock protein binding | 1.87E-03 |
| 19 | GO:0008266: poly(U) RNA binding | 2.03E-03 |
| 20 | GO:0031409: pigment binding | 2.36E-03 |
| 21 | GO:0004176: ATP-dependent peptidase activity | 2.88E-03 |
| 22 | GO:0003756: protein disulfide isomerase activity | 3.43E-03 |
| 23 | GO:0016788: hydrolase activity, acting on ester bonds | 3.95E-03 |
| 24 | GO:0016853: isomerase activity | 4.23E-03 |
| 25 | GO:0005200: structural constituent of cytoskeleton | 5.52E-03 |
| 26 | GO:0016168: chlorophyll binding | 6.21E-03 |
| 27 | GO:0016491: oxidoreductase activity | 6.79E-03 |
| 28 | GO:0004364: glutathione transferase activity | 9.83E-03 |
| 29 | GO:0008289: lipid binding | 9.85E-03 |
| 30 | GO:0004185: serine-type carboxypeptidase activity | 1.01E-02 |
| 31 | GO:0005198: structural molecule activity | 1.10E-02 |
| 32 | GO:0051082: unfolded protein binding | 1.60E-02 |
| 33 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.66E-02 |
| 34 | GO:0030246: carbohydrate binding | 1.70E-02 |
| 35 | GO:0005509: calcium ion binding | 2.36E-02 |
| 36 | GO:0008233: peptidase activity | 3.71E-02 |
| 37 | GO:0052689: carboxylic ester hydrolase activity | 4.03E-02 |
| 38 | GO:0042803: protein homodimerization activity | 4.41E-02 |
| 39 | GO:0003924: GTPase activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 1.42E-17 |
| 3 | GO:0009534: chloroplast thylakoid | 3.82E-15 |
| 4 | GO:0009579: thylakoid | 5.71E-12 |
| 5 | GO:0009507: chloroplast | 1.01E-11 |
| 6 | GO:0009941: chloroplast envelope | 9.54E-09 |
| 7 | GO:0048046: apoplast | 5.35E-07 |
| 8 | GO:0009570: chloroplast stroma | 5.81E-06 |
| 9 | GO:0010287: plastoglobule | 6.88E-06 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 7.73E-06 |
| 11 | GO:0010319: stromule | 1.09E-05 |
| 12 | GO:0045239: tricarboxylic acid cycle enzyme complex | 4.31E-05 |
| 13 | GO:0009508: plastid chromosome | 5.98E-05 |
| 14 | GO:0030095: chloroplast photosystem II | 6.90E-05 |
| 15 | GO:0030093: chloroplast photosystem I | 1.07E-04 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 1.12E-04 |
| 17 | GO:0009523: photosystem II | 2.46E-04 |
| 18 | GO:0019898: extrinsic component of membrane | 2.46E-04 |
| 19 | GO:0009295: nucleoid | 3.42E-04 |
| 20 | GO:0009517: PSII associated light-harvesting complex II | 3.64E-04 |
| 21 | GO:0031977: thylakoid lumen | 7.37E-04 |
| 22 | GO:0009538: photosystem I reaction center | 9.08E-04 |
| 23 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.16E-03 |
| 24 | GO:0042644: chloroplast nucleoid | 1.16E-03 |
| 25 | GO:0045298: tubulin complex | 1.16E-03 |
| 26 | GO:0009505: plant-type cell wall | 1.21E-03 |
| 27 | GO:0005618: cell wall | 1.64E-03 |
| 28 | GO:0030076: light-harvesting complex | 2.19E-03 |
| 29 | GO:0009522: photosystem I | 4.23E-03 |
| 30 | GO:0005874: microtubule | 3.67E-02 |