co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G61480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090627: plant epidermal cell differentiation	0.00E+00
2	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
3	GO:0045014: negative regulation of transcription by glucose	0.00E+00
4	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
5	GO:0010480: microsporocyte differentiation	4.04E-05
6	GO:0043609: regulation of carbon utilization	4.04E-05
7	GO:0009662: etioplast organization	1.00E-04
8	GO:0016117: carotenoid biosynthetic process	1.65E-04
9	GO:0006421: asparaginyl-tRNA aminoacylation	1.73E-04
10	GO:0010623: programmed cell death involved in cell development	1.73E-04
11	GO:0031022: nuclear migration along microfilament	1.73E-04
12	GO:0006000: fructose metabolic process	1.73E-04
13	GO:0007018: microtubule-based movement	2.10E-04
14	GO:0048825: cotyledon development	2.26E-04
15	GO:0042991: transcription factor import into nucleus	3.43E-04
16	GO:0045727: positive regulation of translation	3.43E-04
17	GO:0016120: carotene biosynthetic process	4.37E-04
18	GO:0009904: chloroplast accumulation movement	4.37E-04
19	GO:0009910: negative regulation of flower development	5.28E-04
20	GO:0009913: epidermal cell differentiation	5.37E-04
21	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	5.37E-04
22	GO:0042549: photosystem II stabilization	5.37E-04
23	GO:0010256: endomembrane system organization	5.37E-04
24	GO:0009903: chloroplast avoidance movement	6.40E-04
25	GO:1900057: positive regulation of leaf senescence	7.49E-04
26	GO:1900056: negative regulation of leaf senescence	7.49E-04
27	GO:0048437: floral organ development	7.49E-04
28	GO:0010497: plasmodesmata-mediated intercellular transport	9.77E-04
29	GO:0032544: plastid translation	9.77E-04
30	GO:0006002: fructose 6-phosphate metabolic process	9.77E-04
31	GO:0048507: meristem development	1.10E-03
32	GO:0000373: Group II intron splicing	1.10E-03
33	GO:0048589: developmental growth	1.10E-03
34	GO:0009051: pentose-phosphate shunt, oxidative branch	1.10E-03
35	GO:2000280: regulation of root development	1.22E-03
36	GO:0010205: photoinhibition	1.22E-03
37	GO:0006779: porphyrin-containing compound biosynthetic process	1.22E-03
38	GO:0010380: regulation of chlorophyll biosynthetic process	1.22E-03
39	GO:0006782: protoporphyrinogen IX biosynthetic process	1.35E-03
40	GO:0048229: gametophyte development	1.49E-03
41	GO:0010152: pollen maturation	1.63E-03
42	GO:0010102: lateral root morphogenesis	1.77E-03
43	GO:0010075: regulation of meristem growth	1.77E-03
44	GO:0009934: regulation of meristem structural organization	1.92E-03
45	GO:0055114: oxidation-reduction process	2.02E-03
46	GO:0080092: regulation of pollen tube growth	2.89E-03
47	GO:0009686: gibberellin biosynthetic process	3.06E-03
48	GO:0048443: stamen development	3.24E-03
49	GO:0048653: anther development	3.61E-03
50	GO:0010305: leaf vascular tissue pattern formation	3.80E-03
51	GO:0010268: brassinosteroid homeostasis	3.80E-03
52	GO:0016132: brassinosteroid biosynthetic process	4.38E-03
53	GO:0016032: viral process	4.58E-03
54	GO:0009733: response to auxin	4.98E-03
55	GO:0016125: sterol metabolic process	5.00E-03
56	GO:0071805: potassium ion transmembrane transport	5.21E-03
57	GO:0016126: sterol biosynthetic process	5.64E-03
58	GO:0015995: chlorophyll biosynthetic process	6.31E-03
59	GO:0048481: plant ovule development	6.77E-03
60	GO:0048364: root development	6.78E-03
61	GO:0006499: N-terminal protein myristoylation	7.25E-03
62	GO:0005975: carbohydrate metabolic process	7.30E-03
63	GO:0030001: metal ion transport	8.75E-03
64	GO:0009640: photomorphogenesis	9.53E-03
65	GO:0006364: rRNA processing	1.18E-02
66	GO:0009585: red, far-red light phototransduction	1.18E-02
67	GO:0006813: potassium ion transport	1.18E-02
68	GO:0009736: cytokinin-activated signaling pathway	1.18E-02
69	GO:0051603: proteolysis involved in cellular protein catabolic process	1.20E-02
70	GO:0006096: glycolytic process	1.32E-02
71	GO:0045893: positive regulation of transcription, DNA-templated	1.33E-02
72	GO:0042545: cell wall modification	1.48E-02
73	GO:0009845: seed germination	1.87E-02
74	GO:0009790: embryo development	1.97E-02
75	GO:0045490: pectin catabolic process	2.22E-02
76	GO:0009451: RNA modification	2.26E-02
77	GO:0007166: cell surface receptor signaling pathway	2.45E-02
78	GO:0010468: regulation of gene expression	2.52E-02
79	GO:0009658: chloroplast organization	3.04E-02
80	GO:0009860: pollen tube growth	3.20E-02
81	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.63E-02
82	GO:0015979: photosynthesis	3.89E-02
83	GO:0045454: cell redox homeostasis	4.02E-02
84	GO:0006869: lipid transport	4.30E-02
85	GO:0016042: lipid catabolic process	4.57E-02
86	GO:0007275: multicellular organism development	4.60E-02
87	GO:0006629: lipid metabolic process	4.67E-02
88	GO:0006397: mRNA processing	4.81E-02
89	GO:0007165: signal transduction	4.86E-02
90	GO:0009753: response to jasmonic acid	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
2	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
3	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
4	GO:0046608: carotenoid isomerase activity	0.00E+00
5	GO:0045436: lycopene beta cyclase activity	0.00E+00
6	GO:0051777: ent-kaurenoate oxidase activity	4.04E-05
7	GO:0004816: asparagine-tRNA ligase activity	1.73E-04
8	GO:0016805: dipeptidase activity	1.73E-04
9	GO:0004180: carboxypeptidase activity	1.73E-04
10	GO:0008253: 5'-nucleotidase activity	1.73E-04
11	GO:0017057: 6-phosphogluconolactonase activity	2.55E-04
12	GO:0010011: auxin binding	3.43E-04
13	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	3.43E-04
14	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	3.43E-04
15	GO:0004506: squalene monooxygenase activity	3.43E-04
16	GO:0030145: manganese ion binding	5.28E-04
17	GO:0042578: phosphoric ester hydrolase activity	5.37E-04
18	GO:2001070: starch binding	5.37E-04
19	GO:0003777: microtubule motor activity	1.07E-03
20	GO:0005515: protein binding	1.11E-03
21	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.49E-03
22	GO:0004565: beta-galactosidase activity	1.77E-03
23	GO:0008266: poly(U) RNA binding	1.92E-03
24	GO:0008017: microtubule binding	2.43E-03
25	GO:0015079: potassium ion transmembrane transporter activity	2.55E-03
26	GO:0033612: receptor serine/threonine kinase binding	2.72E-03
27	GO:0004707: MAP kinase activity	2.72E-03
28	GO:0042802: identical protein binding	2.94E-03
29	GO:0050662: coenzyme binding	3.99E-03
30	GO:0004518: nuclease activity	4.58E-03
31	GO:0004197: cysteine-type endopeptidase activity	4.58E-03
32	GO:0016491: oxidoreductase activity	6.10E-03
33	GO:0003746: translation elongation factor activity	7.99E-03
34	GO:0008289: lipid binding	9.05E-03
35	GO:0035091: phosphatidylinositol binding	1.01E-02
36	GO:0016298: lipase activity	1.20E-02
37	GO:0045330: aspartyl esterase activity	1.26E-02
38	GO:0008234: cysteine-type peptidase activity	1.26E-02
39	GO:0045735: nutrient reservoir activity	1.32E-02
40	GO:0030599: pectinesterase activity	1.45E-02
41	GO:0019843: rRNA binding	1.77E-02
42	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.80E-02
43	GO:0005524: ATP binding	2.11E-02
44	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.12E-02
45	GO:0003824: catalytic activity	2.58E-02
46	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.64E-02
47	GO:0016788: hydrolase activity, acting on ester bonds	3.08E-02
48	GO:0050660: flavin adenine dinucleotide binding	3.37E-02
49	GO:0008233: peptidase activity	3.50E-02
50	GO:0052689: carboxylic ester hydrolase activity	3.80E-02
51	GO:0004871: signal transducer activity	4.16E-02
52	GO:0004519: endonuclease activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009507: chloroplast	2.43E-05
3	GO:0005871: kinesin complex	1.65E-04
4	GO:0009570: chloroplast stroma	1.97E-04
5	GO:0009533: chloroplast stromal thylakoid	7.49E-04
6	GO:0008180: COP9 signalosome	1.10E-03
7	GO:0048046: apoplast	1.21E-03
8	GO:0016324: apical plasma membrane	1.35E-03
9	GO:0005764: lysosome	1.92E-03
10	GO:0030095: chloroplast photosystem II	1.92E-03
11	GO:0009523: photosystem II	4.19E-03
12	GO:0005874: microtubule	4.27E-03
13	GO:0031969: chloroplast membrane	4.42E-03
14	GO:0030529: intracellular ribonucleoprotein complex	5.64E-03
15	GO:0009505: plant-type cell wall	5.73E-03
16	GO:0005618: cell wall	6.05E-03
17	GO:0019005: SCF ubiquitin ligase complex	6.77E-03
18	GO:0009941: chloroplast envelope	7.84E-03
19	GO:0000502: proteasome complex	1.18E-02
20	GO:0009579: thylakoid	1.38E-02
21	GO:0010287: plastoglobule	1.70E-02
22	GO:0005623: cell	1.80E-02
23	GO:0005886: plasma membrane	1.84E-02
24	GO:0009705: plant-type vacuole membrane	2.22E-02
25	GO:0005615: extracellular space	2.41E-02
26	GO:0005789: endoplasmic reticulum membrane	3.58E-02
27	GO:0009506: plasmodesma	3.67E-02
28	GO:0005783: endoplasmic reticulum	4.95E-02