co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G61410

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:2000505: regulation of energy homeostasis	0.00E+00
3	GO:0046322: negative regulation of fatty acid oxidation	0.00E+00
4	GO:0015979: photosynthesis	3.37E-06
5	GO:0009765: photosynthesis, light harvesting	8.22E-06
6	GO:0009645: response to low light intensity stimulus	4.01E-05
7	GO:0010411: xyloglucan metabolic process	8.81E-05
8	GO:0060627: regulation of vesicle-mediated transport	9.50E-05
9	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	9.50E-05
10	GO:0007568: aging	1.27E-04
11	GO:0006006: glucose metabolic process	1.88E-04
12	GO:0019388: galactose catabolic process	2.24E-04
13	GO:0045493: xylan catabolic process	3.73E-04
14	GO:0090391: granum assembly	3.73E-04
15	GO:1901562: response to paraquat	3.73E-04
16	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	5.37E-04
17	GO:0009650: UV protection	5.37E-04
18	GO:0010306: rhamnogalacturonan II biosynthetic process	5.37E-04
19	GO:0009590: detection of gravity	5.37E-04
20	GO:0050482: arachidonic acid secretion	5.37E-04
21	GO:0009956: radial pattern formation	7.14E-04
22	GO:0019464: glycine decarboxylation via glycine cleavage system	7.14E-04
23	GO:0006546: glycine catabolic process	7.14E-04
24	GO:0009107: lipoate biosynthetic process	9.02E-04
25	GO:0016123: xanthophyll biosynthetic process	9.02E-04
26	GO:0016120: carotene biosynthetic process	9.02E-04
27	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.10E-03
28	GO:0015995: chlorophyll biosynthetic process	1.21E-03
29	GO:0010189: vitamin E biosynthetic process	1.31E-03
30	GO:0071470: cellular response to osmotic stress	1.31E-03
31	GO:0009612: response to mechanical stimulus	1.31E-03
32	GO:0009416: response to light stimulus	1.44E-03
33	GO:0010196: nonphotochemical quenching	1.54E-03
34	GO:0009769: photosynthesis, light harvesting in photosystem II	1.54E-03
35	GO:0006400: tRNA modification	1.54E-03
36	GO:0009409: response to cold	1.60E-03
37	GO:0006644: phospholipid metabolic process	1.78E-03
38	GO:0005978: glycogen biosynthetic process	1.78E-03
39	GO:0009819: drought recovery	1.78E-03
40	GO:0055114: oxidation-reduction process	2.19E-03
41	GO:0042546: cell wall biogenesis	2.24E-03
42	GO:0006783: heme biosynthetic process	2.29E-03
43	GO:0009644: response to high light intensity	2.33E-03
44	GO:0009638: phototropism	2.56E-03
45	GO:0006779: porphyrin-containing compound biosynthetic process	2.56E-03
46	GO:0045454: cell redox homeostasis	2.73E-03
47	GO:0006782: protoporphyrinogen IX biosynthetic process	2.85E-03
48	GO:0006869: lipid transport	3.07E-03
49	GO:0010015: root morphogenesis	3.14E-03
50	GO:0009773: photosynthetic electron transport in photosystem I	3.14E-03
51	GO:0019684: photosynthesis, light reaction	3.14E-03
52	GO:0016024: CDP-diacylglycerol biosynthetic process	3.44E-03
53	GO:0006629: lipid metabolic process	3.56E-03
54	GO:0010143: cutin biosynthetic process	4.08E-03
55	GO:0009933: meristem structural organization	4.08E-03
56	GO:0019253: reductive pentose-phosphate cycle	4.08E-03
57	GO:0010207: photosystem II assembly	4.08E-03
58	GO:0071555: cell wall organization	4.21E-03
59	GO:0051017: actin filament bundle assembly	5.10E-03
60	GO:0007017: microtubule-based process	5.46E-03
61	GO:0009768: photosynthesis, light harvesting in photosystem I	5.46E-03
62	GO:0048511: rhythmic process	5.83E-03
63	GO:0010431: seed maturation	5.83E-03
64	GO:0009269: response to desiccation	5.83E-03
65	GO:0006012: galactose metabolic process	6.58E-03
66	GO:0009411: response to UV	6.58E-03
67	GO:0016117: carotenoid biosynthetic process	7.38E-03
68	GO:0000413: protein peptidyl-prolyl isomerization	7.79E-03
69	GO:0048868: pollen tube development	8.21E-03
70	GO:0010305: leaf vascular tissue pattern formation	8.21E-03
71	GO:0042752: regulation of circadian rhythm	8.63E-03
72	GO:0019252: starch biosynthetic process	9.06E-03
73	GO:0010027: thylakoid membrane organization	1.23E-02
74	GO:0009627: systemic acquired resistance	1.33E-02
75	GO:0009817: defense response to fungus, incompatible interaction	1.49E-02
76	GO:0018298: protein-chromophore linkage	1.49E-02
77	GO:0010218: response to far red light	1.59E-02
78	GO:0009637: response to blue light	1.76E-02
79	GO:0042742: defense response to bacterium	1.80E-02
80	GO:0034599: cellular response to oxidative stress	1.81E-02
81	GO:0010114: response to red light	2.10E-02
82	GO:0042538: hyperosmotic salinity response	2.47E-02
83	GO:0009585: red, far-red light phototransduction	2.60E-02
84	GO:0006096: glycolytic process	2.93E-02
85	GO:0043086: negative regulation of catalytic activity	2.93E-02
86	GO:0006633: fatty acid biosynthetic process	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
2	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
3	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
4	GO:0045550: geranylgeranyl reductase activity	0.00E+00
5	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
6	GO:0051920: peroxiredoxin activity	1.81E-07
7	GO:0016209: antioxidant activity	4.62E-07
8	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	9.50E-05
9	GO:0008883: glutamyl-tRNA reductase activity	2.24E-04
10	GO:0030385: ferredoxin:thioredoxin reductase activity	2.24E-04
11	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	2.24E-04
12	GO:0008967: phosphoglycolate phosphatase activity	2.24E-04
13	GO:0004614: phosphoglucomutase activity	2.24E-04
14	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	3.73E-04
15	GO:0004324: ferredoxin-NADP+ reductase activity	3.73E-04
16	GO:0016992: lipoate synthase activity	3.73E-04
17	GO:0004375: glycine dehydrogenase (decarboxylating) activity	5.37E-04
18	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	5.37E-04
19	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	5.37E-04
20	GO:0046556: alpha-L-arabinofuranosidase activity	7.14E-04
21	GO:1990137: plant seed peroxidase activity	7.14E-04
22	GO:0009044: xylan 1,4-beta-xylosidase activity	7.14E-04
23	GO:0016762: xyloglucan:xyloglucosyl transferase activity	7.29E-04
24	GO:0003959: NADPH dehydrogenase activity	9.02E-04
25	GO:0004623: phospholipase A2 activity	9.02E-04
26	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.10E-03
27	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.10E-03
28	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.21E-03
29	GO:0004017: adenylate kinase activity	1.31E-03
30	GO:0004601: peroxidase activity	1.66E-03
31	GO:0004034: aldose 1-epimerase activity	1.78E-03
32	GO:0050661: NADP binding	1.91E-03
33	GO:0051539: 4 iron, 4 sulfur cluster binding	1.91E-03
34	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.20E-03
35	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	2.29E-03
36	GO:0047372: acylglycerol lipase activity	3.14E-03
37	GO:0008266: poly(U) RNA binding	4.08E-03
38	GO:0031409: pigment binding	4.75E-03
39	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.75E-03
40	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.75E-03
41	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.75E-03
42	GO:0008289: lipid binding	5.41E-03
43	GO:0016491: oxidoreductase activity	6.39E-03
44	GO:0016853: isomerase activity	8.63E-03
45	GO:0051015: actin filament binding	1.04E-02
46	GO:0016791: phosphatase activity	1.09E-02
47	GO:0008237: metallopeptidase activity	1.14E-02
48	GO:0005200: structural constituent of cytoskeleton	1.14E-02
49	GO:0005516: calmodulin binding	1.24E-02
50	GO:0016168: chlorophyll binding	1.28E-02
51	GO:0004222: metalloendopeptidase activity	1.59E-02
52	GO:0005509: calcium ion binding	1.63E-02
53	GO:0003924: GTPase activity	2.01E-02
54	GO:0005198: structural molecule activity	2.29E-02
55	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.35E-02
56	GO:0051287: NAD binding	2.41E-02
57	GO:0003690: double-stranded DNA binding	2.67E-02
58	GO:0045735: nutrient reservoir activity	2.93E-02
59	GO:0016746: transferase activity, transferring acyl groups	3.42E-02
60	GO:0000166: nucleotide binding	3.56E-02
61	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.00E-02
62	GO:0046910: pectinesterase inhibitor activity	4.69E-02
63	GO:0030246: carbohydrate binding	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	7.80E-17
2	GO:0009535: chloroplast thylakoid membrane	9.04E-14
3	GO:0009534: chloroplast thylakoid	2.62E-12
4	GO:0048046: apoplast	6.68E-09
5	GO:0009579: thylakoid	2.34E-08
6	GO:0009543: chloroplast thylakoid lumen	1.12E-07
7	GO:0009941: chloroplast envelope	2.78E-07
8	GO:0009570: chloroplast stroma	1.55E-06
9	GO:0031977: thylakoid lumen	9.10E-06
10	GO:0010287: plastoglobule	5.58E-05
11	GO:0010319: stromule	5.77E-05
12	GO:0009515: granal stacked thylakoid	9.50E-05
13	GO:0030093: chloroplast photosystem I	2.24E-04
14	GO:0031969: chloroplast membrane	3.34E-04
15	GO:0005960: glycine cleavage complex	5.37E-04
16	GO:0009522: photosystem I	6.38E-04
17	GO:0009517: PSII associated light-harvesting complex II	7.14E-04
18	GO:0005618: cell wall	8.98E-04
19	GO:0009505: plant-type cell wall	1.40E-03
20	GO:0009533: chloroplast stromal thylakoid	1.54E-03
21	GO:0005811: lipid particle	2.03E-03
22	GO:0045298: tubulin complex	2.29E-03
23	GO:0030076: light-harvesting complex	4.41E-03
24	GO:0043234: protein complex	4.75E-03
25	GO:0009654: photosystem II oxygen evolving complex	5.46E-03
26	GO:0031410: cytoplasmic vesicle	6.20E-03
27	GO:0015629: actin cytoskeleton	6.58E-03
28	GO:0009523: photosystem II	9.06E-03
29	GO:0019898: extrinsic component of membrane	9.06E-03
30	GO:0009707: chloroplast outer membrane	1.49E-02
31	GO:0005856: cytoskeleton	2.29E-02
32	GO:0009506: plasmodesma	3.17E-02
33	GO:0005576: extracellular region	4.71E-02
34	GO:0016020: membrane	4.87E-02