co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G60900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
2	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
3	GO:0009992: cellular water homeostasis	0.00E+00
4	GO:0006468: protein phosphorylation	1.12E-10
5	GO:0006952: defense response	3.44E-07
6	GO:0031348: negative regulation of defense response	7.98E-07
7	GO:0007166: cell surface receptor signaling pathway	2.78E-06
8	GO:0009751: response to salicylic acid	3.01E-06
9	GO:0006517: protein deglycosylation	3.92E-06
10	GO:0048194: Golgi vesicle budding	9.15E-06
11	GO:0010200: response to chitin	1.37E-05
12	GO:0060548: negative regulation of cell death	1.71E-05
13	GO:0042742: defense response to bacterium	2.30E-05
14	GO:0010942: positive regulation of cell death	4.18E-05
15	GO:0070370: cellular heat acclimation	7.88E-05
16	GO:1900056: negative regulation of leaf senescence	7.88E-05
17	GO:0010120: camalexin biosynthetic process	1.27E-04
18	GO:0006680: glucosylceramide catabolic process	1.46E-04
19	GO:0060862: negative regulation of floral organ abscission	1.46E-04
20	GO:0051245: negative regulation of cellular defense response	1.46E-04
21	GO:0071366: cellular response to indolebutyric acid stimulus	1.46E-04
22	GO:0006643: membrane lipid metabolic process	1.46E-04
23	GO:0009816: defense response to bacterium, incompatible interaction	1.74E-04
24	GO:0009627: systemic acquired resistance	1.88E-04
25	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.88E-04
26	GO:0008219: cell death	2.33E-04
27	GO:0009817: defense response to fungus, incompatible interaction	2.33E-04
28	GO:0051258: protein polymerization	3.33E-04
29	GO:0019483: beta-alanine biosynthetic process	3.33E-04
30	GO:0051252: regulation of RNA metabolic process	3.33E-04
31	GO:0002221: pattern recognition receptor signaling pathway	3.33E-04
32	GO:0015914: phospholipid transport	3.33E-04
33	GO:0080185: effector dependent induction by symbiont of host immune response	3.33E-04
34	GO:0010618: aerenchyma formation	3.33E-04
35	GO:0080181: lateral root branching	3.33E-04
36	GO:0006212: uracil catabolic process	3.33E-04
37	GO:0031349: positive regulation of defense response	3.33E-04
38	GO:0034605: cellular response to heat	3.85E-04
39	GO:0050832: defense response to fungus	5.29E-04
40	GO:0042344: indole glucosinolate catabolic process	5.47E-04
41	GO:1900140: regulation of seedling development	5.47E-04
42	GO:0072661: protein targeting to plasma membrane	5.47E-04
43	GO:0015695: organic cation transport	5.47E-04
44	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	5.47E-04
45	GO:0031347: regulation of defense response	5.69E-04
46	GO:0002679: respiratory burst involved in defense response	7.83E-04
47	GO:0006612: protein targeting to membrane	7.83E-04
48	GO:0015696: ammonium transport	7.83E-04
49	GO:0006515: misfolded or incompletely synthesized protein catabolic process	7.83E-04
50	GO:0009311: oligosaccharide metabolic process	7.83E-04
51	GO:0072583: clathrin-dependent endocytosis	7.83E-04
52	GO:0010148: transpiration	7.83E-04
53	GO:0006516: glycoprotein catabolic process	7.83E-04
54	GO:0009626: plant-type hypersensitive response	8.69E-04
55	GO:0009620: response to fungus	9.03E-04
56	GO:0010188: response to microbial phytotoxin	1.04E-03
57	GO:0080142: regulation of salicylic acid biosynthetic process	1.04E-03
58	GO:0072488: ammonium transmembrane transport	1.04E-03
59	GO:0010363: regulation of plant-type hypersensitive response	1.04E-03
60	GO:0010508: positive regulation of autophagy	1.04E-03
61	GO:0061025: membrane fusion	1.11E-03
62	GO:0006623: protein targeting to vacuole	1.19E-03
63	GO:0000304: response to singlet oxygen	1.31E-03
64	GO:0031365: N-terminal protein amino acid modification	1.31E-03
65	GO:0009229: thiamine diphosphate biosynthetic process	1.31E-03
66	GO:0006629: lipid metabolic process	1.47E-03
67	GO:0009228: thiamine biosynthetic process	1.61E-03
68	GO:0009759: indole glucosinolate biosynthetic process	1.61E-03
69	GO:0015691: cadmium ion transport	1.61E-03
70	GO:0009612: response to mechanical stimulus	1.93E-03
71	GO:0010310: regulation of hydrogen peroxide metabolic process	1.93E-03
72	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.93E-03
73	GO:0000911: cytokinesis by cell plate formation	1.93E-03
74	GO:0010044: response to aluminum ion	2.27E-03
75	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.27E-03
76	GO:0010161: red light signaling pathway	2.27E-03
77	GO:0046470: phosphatidylcholine metabolic process	2.27E-03
78	GO:0071446: cellular response to salicylic acid stimulus	2.27E-03
79	GO:0006470: protein dephosphorylation	2.37E-03
80	GO:0009617: response to bacterium	2.50E-03
81	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.63E-03
82	GO:0030162: regulation of proteolysis	2.63E-03
83	GO:0006491: N-glycan processing	2.63E-03
84	GO:0006979: response to oxidative stress	2.69E-03
85	GO:0010119: regulation of stomatal movement	2.72E-03
86	GO:0009737: response to abscisic acid	2.95E-03
87	GO:0043562: cellular response to nitrogen levels	3.00E-03
88	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.00E-03
89	GO:0071482: cellular response to light stimulus	3.00E-03
90	GO:0051865: protein autoubiquitination	3.40E-03
91	GO:0006887: exocytosis	3.53E-03
92	GO:0007064: mitotic sister chromatid cohesion	4.23E-03
93	GO:0043069: negative regulation of programmed cell death	4.23E-03
94	GO:0010215: cellulose microfibril organization	4.23E-03
95	GO:0006995: cellular response to nitrogen starvation	4.23E-03
96	GO:0019684: photosynthesis, light reaction	4.67E-03
97	GO:0030148: sphingolipid biosynthetic process	4.67E-03
98	GO:0052544: defense response by callose deposition in cell wall	4.67E-03
99	GO:0046777: protein autophosphorylation	4.97E-03
100	GO:0006807: nitrogen compound metabolic process	5.60E-03
101	GO:0006829: zinc II ion transport	5.60E-03
102	GO:0070588: calcium ion transmembrane transport	6.59E-03
103	GO:0009863: salicylic acid mediated signaling pathway	7.63E-03
104	GO:0031408: oxylipin biosynthetic process	8.73E-03
105	GO:0048278: vesicle docking	8.73E-03
106	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.30E-03
107	GO:0071456: cellular response to hypoxia	9.30E-03
108	GO:0006284: base-excision repair	1.05E-02
109	GO:0042391: regulation of membrane potential	1.17E-02
110	GO:0000413: protein peptidyl-prolyl isomerization	1.17E-02
111	GO:0010197: polar nucleus fusion	1.24E-02
112	GO:0010183: pollen tube guidance	1.37E-02
113	GO:0010193: response to ozone	1.43E-02
114	GO:0000302: response to reactive oxygen species	1.43E-02
115	GO:0010468: regulation of gene expression	1.52E-02
116	GO:0030163: protein catabolic process	1.57E-02
117	GO:0006904: vesicle docking involved in exocytosis	1.72E-02
118	GO:0051607: defense response to virus	1.79E-02
119	GO:0001666: response to hypoxia	1.86E-02
120	GO:0009615: response to virus	1.86E-02
121	GO:0009607: response to biotic stimulus	1.94E-02
122	GO:0006906: vesicle fusion	2.01E-02
123	GO:0006970: response to osmotic stress	2.12E-02
124	GO:0016049: cell growth	2.17E-02
125	GO:0010311: lateral root formation	2.33E-02
126	GO:0006499: N-terminal protein myristoylation	2.41E-02
127	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.53E-02
128	GO:0016192: vesicle-mediated transport	2.57E-02
129	GO:0044550: secondary metabolite biosynthetic process	2.65E-02
130	GO:0009867: jasmonic acid mediated signaling pathway	2.66E-02
131	GO:0006886: intracellular protein transport	3.01E-02
132	GO:0007165: signal transduction	3.07E-02
133	GO:0051707: response to other organism	3.19E-02
134	GO:0016042: lipid catabolic process	3.50E-02
135	GO:0006855: drug transmembrane transport	3.56E-02
136	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.65E-02
137	GO:0006812: cation transport	3.75E-02
138	GO:0016310: phosphorylation	3.89E-02
139	GO:0042545: cell wall modification	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0052822: DNA-3-methylguanine glycosylase activity	0.00E+00
2	GO:0043916: DNA-7-methylguanine glycosylase activity	0.00E+00
3	GO:0050334: thiaminase activity	0.00E+00
4	GO:0052821: DNA-7-methyladenine glycosylase activity	0.00E+00
5	GO:0015370: solute:sodium symporter activity	0.00E+00
6	GO:0003905: alkylbase DNA N-glycosylase activity	0.00E+00
7	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
8	GO:0003837: beta-ureidopropionase activity	0.00E+00
9	GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	0.00E+00
10	GO:0016301: kinase activity	1.84E-10
11	GO:0005524: ATP binding	3.25E-08
12	GO:0004674: protein serine/threonine kinase activity	1.70E-07
13	GO:0004012: phospholipid-translocating ATPase activity	5.20E-07
14	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.04E-05
15	GO:0005516: calmodulin binding	6.49E-05
16	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.02E-04
17	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	1.46E-04
18	GO:0004348: glucosylceramidase activity	1.46E-04
19	GO:0032050: clathrin heavy chain binding	1.46E-04
20	GO:1901149: salicylic acid binding	1.46E-04
21	GO:0015085: calcium ion transmembrane transporter activity	1.46E-04
22	GO:0030247: polysaccharide binding	2.03E-04
23	GO:0004806: triglyceride lipase activity	2.03E-04
24	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.68E-04
25	GO:0008428: ribonuclease inhibitor activity	3.33E-04
26	GO:0045140: inositol phosphoceramide synthase activity	3.33E-04
27	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	3.33E-04
28	GO:0004190: aspartic-type endopeptidase activity	4.32E-04
29	GO:0005509: calcium ion binding	5.65E-04
30	GO:0033612: receptor serine/threonine kinase binding	6.43E-04
31	GO:0016298: lipase activity	6.80E-04
32	GO:0015086: cadmium ion transmembrane transporter activity	7.83E-04
33	GO:0015204: urea transmembrane transporter activity	1.04E-03
34	GO:0019199: transmembrane receptor protein kinase activity	1.04E-03
35	GO:0043495: protein anchor	1.04E-03
36	GO:0008725: DNA-3-methyladenine glycosylase activity	1.31E-03
37	GO:0008948: oxaloacetate decarboxylase activity	1.31E-03
38	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.31E-03
39	GO:0008519: ammonium transmembrane transporter activity	1.61E-03
40	GO:0004656: procollagen-proline 4-dioxygenase activity	1.93E-03
41	GO:0004620: phospholipase activity	2.27E-03
42	GO:0008235: metalloexopeptidase activity	2.27E-03
43	GO:0004630: phospholipase D activity	3.00E-03
44	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.00E-03
45	GO:0005515: protein binding	3.05E-03
46	GO:0000287: magnesium ion binding	3.39E-03
47	GO:0005484: SNAP receptor activity	3.83E-03
48	GO:0004713: protein tyrosine kinase activity	4.23E-03
49	GO:0004177: aminopeptidase activity	4.67E-03
50	GO:0047372: acylglycerol lipase activity	4.67E-03
51	GO:0005388: calcium-transporting ATPase activity	5.60E-03
52	GO:0004722: protein serine/threonine phosphatase activity	6.45E-03
53	GO:0030552: cAMP binding	6.59E-03
54	GO:0030553: cGMP binding	6.59E-03
55	GO:0031418: L-ascorbic acid binding	7.63E-03
56	GO:0003954: NADH dehydrogenase activity	7.63E-03
57	GO:0005216: ion channel activity	8.18E-03
58	GO:0008324: cation transmembrane transporter activity	8.18E-03
59	GO:0004707: MAP kinase activity	8.73E-03
60	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	9.42E-03
61	GO:0008810: cellulase activity	9.89E-03
62	GO:0005506: iron ion binding	1.00E-02
63	GO:0005249: voltage-gated potassium channel activity	1.17E-02
64	GO:0030551: cyclic nucleotide binding	1.17E-02
65	GO:0046873: metal ion transmembrane transporter activity	1.24E-02
66	GO:0043565: sequence-specific DNA binding	1.62E-02
67	GO:0004672: protein kinase activity	1.83E-02
68	GO:0008375: acetylglucosaminyltransferase activity	2.01E-02
69	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.01E-02
70	GO:0004721: phosphoprotein phosphatase activity	2.09E-02
71	GO:0004683: calmodulin-dependent protein kinase activity	2.09E-02
72	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.09E-02
73	GO:0019825: oxygen binding	2.42E-02
74	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.66E-02
75	GO:0000149: SNARE binding	2.83E-02
76	GO:0042803: protein homodimerization activity	3.06E-02
77	GO:0004871: signal transducer activity	3.06E-02
78	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.16E-02
79	GO:0015293: symporter activity	3.47E-02
80	GO:0005198: structural molecule activity	3.47E-02
81	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.56E-02
82	GO:0045330: aspartyl esterase activity	4.24E-02
83	GO:0031625: ubiquitin protein ligase binding	4.24E-02
84	GO:0045735: nutrient reservoir activity	4.44E-02
85	GO:0030599: pectinesterase activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	2.12E-13
2	GO:0016021: integral component of membrane	2.17E-06
3	GO:0005887: integral component of plasma membrane	7.79E-05
4	GO:0017119: Golgi transport complex	2.22E-04
5	GO:0031304: intrinsic component of mitochondrial inner membrane	3.33E-04
6	GO:0005802: trans-Golgi network	4.14E-04
7	GO:0070062: extracellular exosome	7.83E-04
8	GO:0009504: cell plate	1.19E-03
9	GO:0031902: late endosome membrane	3.53E-03
10	GO:0030665: clathrin-coated vesicle membrane	3.81E-03
11	GO:0030125: clathrin vesicle coat	4.23E-03
12	GO:0005795: Golgi stack	6.59E-03
13	GO:0016020: membrane	6.93E-03
14	GO:0009506: plasmodesma	7.31E-03
15	GO:0019898: extrinsic component of membrane	1.37E-02
16	GO:0000145: exocyst	1.50E-02
17	GO:0071944: cell periphery	1.57E-02
18	GO:0005789: endoplasmic reticulum membrane	1.94E-02
19	GO:0019005: SCF ubiquitin ligase complex	2.25E-02
20	GO:0031201: SNARE complex	3.01E-02
21	GO:0090406: pollen tube	3.19E-02
22	GO:0005681: spliceosomal complex	4.44E-02
23	GO:0016607: nuclear speck	4.54E-02