Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G60860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
2GO:0043007: maintenance of rDNA2.88E-05
3GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway2.88E-05
4GO:0000032: cell wall mannoprotein biosynthetic process2.88E-05
5GO:0032025: response to cobalt ion2.88E-05
6GO:0009831: plant-type cell wall modification involved in multidimensional cell growth8.61E-05
7GO:0005975: carbohydrate metabolic process1.05E-04
8GO:0033591: response to L-ascorbic acid1.27E-04
9GO:0046168: glycerol-3-phosphate catabolic process1.27E-04
10GO:0050482: arachidonic acid secretion1.89E-04
11GO:0009828: plant-type cell wall loosening1.89E-04
12GO:0009413: response to flooding1.89E-04
13GO:0009298: GDP-mannose biosynthetic process1.89E-04
14GO:0006072: glycerol-3-phosphate metabolic process1.89E-04
15GO:0051016: barbed-end actin filament capping1.89E-04
16GO:0006183: GTP biosynthetic process2.57E-04
17GO:0008295: spermidine biosynthetic process2.57E-04
18GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.06E-04
19GO:0006631: fatty acid metabolic process4.50E-04
20GO:2000033: regulation of seed dormancy process4.86E-04
21GO:0009664: plant-type cell wall organization6.07E-04
22GO:0045010: actin nucleation6.55E-04
23GO:0006644: phospholipid metabolic process6.55E-04
24GO:0043069: negative regulation of programmed cell death1.03E-03
25GO:0006949: syncytium formation1.03E-03
26GO:0010162: seed dormancy process1.03E-03
27GO:0000038: very long-chain fatty acid metabolic process1.13E-03
28GO:0030036: actin cytoskeleton organization1.34E-03
29GO:0006633: fatty acid biosynthetic process1.40E-03
30GO:0009969: xyloglucan biosynthetic process1.56E-03
31GO:0007166: cell surface receptor signaling pathway1.74E-03
32GO:0007017: microtubule-based process1.92E-03
33GO:0016998: cell wall macromolecule catabolic process2.04E-03
34GO:0031348: negative regulation of defense response2.17E-03
35GO:0009826: unidimensional cell growth2.26E-03
36GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.57E-03
37GO:0042335: cuticle development2.70E-03
38GO:0010182: sugar mediated signaling pathway2.84E-03
39GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.28E-03
40GO:0071554: cell wall organization or biogenesis3.28E-03
41GO:0051607: defense response to virus4.05E-03
42GO:0042128: nitrate assimilation4.54E-03
43GO:0010411: xyloglucan metabolic process4.71E-03
44GO:0009813: flavonoid biosynthetic process5.22E-03
45GO:0010043: response to zinc ion5.58E-03
46GO:0045087: innate immune response5.94E-03
47GO:0016051: carbohydrate biosynthetic process5.94E-03
48GO:0010114: response to red light7.08E-03
49GO:0009738: abscisic acid-activated signaling pathway7.26E-03
50GO:0042546: cell wall biogenesis7.28E-03
51GO:0042538: hyperosmotic salinity response8.29E-03
52GO:0006486: protein glycosylation8.71E-03
53GO:0006857: oligopeptide transport9.14E-03
54GO:0071555: cell wall organization1.53E-02
55GO:0009739: response to gibberellin1.78E-02
56GO:0009658: chloroplast organization2.24E-02
57GO:0007049: cell cycle2.42E-02
58GO:0045892: negative regulation of transcription, DNA-templated3.00E-02
59GO:0006869: lipid transport3.17E-02
60GO:0009737: response to abscisic acid3.25E-02
61GO:0016042: lipid catabolic process3.38E-02
62GO:0006281: DNA repair3.45E-02
63GO:0009753: response to jasmonic acid3.62E-02
64GO:0009908: flower development4.82E-02
RankGO TermAdjusted P value
1GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
2GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
3GO:0004476: mannose-6-phosphate isomerase activity2.88E-05
4GO:0080132: fatty acid alpha-hydroxylase activity2.88E-05
5GO:0003938: IMP dehydrogenase activity7.28E-05
6GO:0004766: spermidine synthase activity7.28E-05
7GO:0005504: fatty acid binding1.27E-04
8GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.27E-04
9GO:0045430: chalcone isomerase activity2.57E-04
10GO:0004623: phospholipase A2 activity3.30E-04
11GO:0015020: glucuronosyltransferase activity1.03E-03
12GO:0008378: galactosyltransferase activity1.23E-03
13GO:0004565: beta-galactosidase activity1.34E-03
14GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.43E-03
15GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.67E-03
16GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.67E-03
17GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.67E-03
18GO:0016762: xyloglucan:xyloglucosyl transferase activity3.28E-03
19GO:0051015: actin filament binding3.58E-03
20GO:0005200: structural constituent of cytoskeleton3.89E-03
21GO:0016413: O-acetyltransferase activity4.05E-03
22GO:0008375: acetylglucosaminyltransferase activity4.54E-03
23GO:0016798: hydrolase activity, acting on glycosyl bonds4.71E-03
24GO:0030145: manganese ion binding5.58E-03
25GO:0008289: lipid binding5.89E-03
26GO:0015293: symporter activity7.68E-03
27GO:0051287: NAD binding8.09E-03
28GO:0045735: nutrient reservoir activity9.79E-03
29GO:0003779: actin binding1.09E-02
30GO:0003824: catalytic activity1.67E-02
31GO:0005215: transporter activity1.69E-02
32GO:0061630: ubiquitin protein ligase activity2.71E-02
33GO:0016301: kinase activity2.74E-02
34GO:0004871: signal transducer activity3.07E-02
35GO:0003924: GTPase activity3.45E-02
36GO:0009055: electron carrier activity3.62E-02
RankGO TermAdjusted P value
1GO:0009331: glycerol-3-phosphate dehydrogenase complex1.89E-04
2GO:0015630: microtubule cytoskeleton1.89E-04
3GO:0005886: plasma membrane1.77E-03
4GO:0031225: anchored component of membrane1.79E-03
5GO:0046658: anchored component of plasma membrane2.01E-03
6GO:0031410: cytoplasmic vesicle2.17E-03
7GO:0048046: apoplast2.73E-03
8GO:0005618: cell wall3.11E-03
9GO:0000151: ubiquitin ligase complex5.05E-03
10GO:0005794: Golgi apparatus9.10E-03
11GO:0005834: heterotrimeric G-protein complex1.02E-02
12GO:0009505: plant-type cell wall1.91E-02
13GO:0016020: membrane2.16E-02
14GO:0005874: microtubule2.55E-02
15GO:0005576: extracellular region2.73E-02
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Gene type



Gene DE type