co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G60200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090706: specification of plant organ position	0.00E+00
2	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
3	GO:0045176: apical protein localization	0.00E+00
4	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	2.42E-05
5	GO:0008610: lipid biosynthetic process	6.06E-05
6	GO:0010480: microsporocyte differentiation	1.04E-04
7	GO:0031338: regulation of vesicle fusion	1.04E-04
8	GO:0010450: inflorescence meristem growth	1.04E-04
9	GO:0000476: maturation of 4.5S rRNA	1.04E-04
10	GO:0000967: rRNA 5'-end processing	1.04E-04
11	GO:0016560: protein import into peroxisome matrix, docking	2.44E-04
12	GO:0010270: photosystem II oxygen evolving complex assembly	2.44E-04
13	GO:0034470: ncRNA processing	2.44E-04
14	GO:0043617: cellular response to sucrose starvation	4.05E-04
15	GO:0090630: activation of GTPase activity	4.05E-04
16	GO:0045165: cell fate commitment	4.05E-04
17	GO:0031022: nuclear migration along microfilament	4.05E-04
18	GO:0046777: protein autophosphorylation	4.53E-04
19	GO:0006515: misfolded or incompletely synthesized protein catabolic process	5.82E-04
20	GO:0009741: response to brassinosteroid	6.70E-04
21	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	7.73E-04
22	GO:0006085: acetyl-CoA biosynthetic process	7.73E-04
23	GO:1901601: strigolactone biosynthetic process	7.73E-04
24	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	8.21E-04
25	GO:0009904: chloroplast accumulation movement	9.77E-04
26	GO:1902183: regulation of shoot apical meristem development	9.77E-04
27	GO:0010438: cellular response to sulfur starvation	9.77E-04
28	GO:0010158: abaxial cell fate specification	9.77E-04
29	GO:0016126: sterol biosynthetic process	1.16E-03
30	GO:0009759: indole glucosinolate biosynthetic process	1.19E-03
31	GO:0006751: glutathione catabolic process	1.19E-03
32	GO:0048827: phyllome development	1.19E-03
33	GO:0042549: photosystem II stabilization	1.19E-03
34	GO:0006828: manganese ion transport	1.19E-03
35	GO:0009913: epidermal cell differentiation	1.19E-03
36	GO:0015995: chlorophyll biosynthetic process	1.36E-03
37	GO:0009903: chloroplast avoidance movement	1.43E-03
38	GO:1900057: positive regulation of leaf senescence	1.67E-03
39	GO:0051510: regulation of unidimensional cell growth	1.67E-03
40	GO:0048437: floral organ development	1.67E-03
41	GO:0009416: response to light stimulus	1.75E-03
42	GO:0010093: specification of floral organ identity	2.21E-03
43	GO:0009932: cell tip growth	2.21E-03
44	GO:0009640: photomorphogenesis	2.44E-03
45	GO:2000024: regulation of leaf development	2.49E-03
46	GO:0000373: Group II intron splicing	2.49E-03
47	GO:0046685: response to arsenic-containing substance	2.49E-03
48	GO:0009051: pentose-phosphate shunt, oxidative branch	2.49E-03
49	GO:0048507: meristem development	2.49E-03
50	GO:0006779: porphyrin-containing compound biosynthetic process	2.79E-03
51	GO:0006782: protoporphyrinogen IX biosynthetic process	3.10E-03
52	GO:0048229: gametophyte development	3.42E-03
53	GO:0016485: protein processing	3.42E-03
54	GO:0000038: very long-chain fatty acid metabolic process	3.42E-03
55	GO:0006816: calcium ion transport	3.42E-03
56	GO:0002213: defense response to insect	3.75E-03
57	GO:0010229: inflorescence development	4.09E-03
58	GO:0018107: peptidyl-threonine phosphorylation	4.09E-03
59	GO:0009718: anthocyanin-containing compound biosynthetic process	4.09E-03
60	GO:0010075: regulation of meristem growth	4.09E-03
61	GO:0010102: lateral root morphogenesis	4.09E-03
62	GO:0010223: secondary shoot formation	4.44E-03
63	GO:0010540: basipetal auxin transport	4.44E-03
64	GO:0009934: regulation of meristem structural organization	4.44E-03
65	GO:0009933: meristem structural organization	4.44E-03
66	GO:0009753: response to jasmonic acid	4.56E-03
67	GO:0010053: root epidermal cell differentiation	4.80E-03
68	GO:0009742: brassinosteroid mediated signaling pathway	4.91E-03
69	GO:0006636: unsaturated fatty acid biosynthetic process	5.18E-03
70	GO:0000162: tryptophan biosynthetic process	5.18E-03
71	GO:0006289: nucleotide-excision repair	5.56E-03
72	GO:0009944: polarity specification of adaxial/abaxial axis	5.56E-03
73	GO:0080092: regulation of pollen tube growth	6.76E-03
74	GO:0040007: growth	7.18E-03
75	GO:0006633: fatty acid biosynthetic process	7.28E-03
76	GO:0048653: anther development	8.49E-03
77	GO:0042335: cuticle development	8.49E-03
78	GO:0010154: fruit development	8.95E-03
79	GO:0010305: leaf vascular tissue pattern formation	8.95E-03
80	GO:0035556: intracellular signal transduction	9.26E-03
81	GO:0007018: microtubule-based movement	9.42E-03
82	GO:0009646: response to absence of light	9.42E-03
83	GO:0005975: carbohydrate metabolic process	9.59E-03
84	GO:0048825: cotyledon development	9.90E-03
85	GO:0009791: post-embryonic development	9.90E-03
86	GO:0016032: viral process	1.09E-02
87	GO:0009826: unidimensional cell growth	1.19E-02
88	GO:0071805: potassium ion transmembrane transport	1.24E-02
89	GO:0009911: positive regulation of flower development	1.35E-02
90	GO:0009723: response to ethylene	1.44E-02
91	GO:0007165: signal transduction	1.55E-02
92	GO:0006811: ion transport	1.74E-02
93	GO:0009910: negative regulation of flower development	1.80E-02
94	GO:0009631: cold acclimation	1.80E-02
95	GO:0048527: lateral root development	1.80E-02
96	GO:0045454: cell redox homeostasis	1.85E-02
97	GO:0016042: lipid catabolic process	2.21E-02
98	GO:0006629: lipid metabolic process	2.28E-02
99	GO:0009744: response to sucrose	2.30E-02
100	GO:0009733: response to auxin	2.44E-02
101	GO:0008152: metabolic process	2.51E-02
102	GO:0006364: rRNA processing	2.84E-02
103	GO:0006813: potassium ion transport	2.84E-02
104	GO:0009909: regulation of flower development	3.06E-02
105	GO:0006096: glycolytic process	3.20E-02
106	GO:0009740: gibberellic acid mediated signaling pathway	3.50E-02
107	GO:0009908: flower development	3.65E-02
108	GO:0018105: peptidyl-serine phosphorylation	3.73E-02
109	GO:0055114: oxidation-reduction process	4.01E-02
110	GO:0006468: protein phosphorylation	4.01E-02
111	GO:0045893: positive regulation of transcription, DNA-templated	4.62E-02
112	GO:0009790: embryo development	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
2	GO:1990534: thermospermine oxidase activity	0.00E+00
3	GO:0005524: ATP binding	8.89E-05
4	GO:0004163: diphosphomevalonate decarboxylase activity	1.04E-04
5	GO:0050139: nicotinate-N-glucosyltransferase activity	1.04E-04
6	GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	1.04E-04
7	GO:0016301: kinase activity	1.79E-04
8	GO:0003839: gamma-glutamylcyclotransferase activity	2.44E-04
9	GO:0005094: Rho GDP-dissociation inhibitor activity	2.44E-04
10	GO:0004312: fatty acid synthase activity	2.44E-04
11	GO:0016805: dipeptidase activity	4.05E-04
12	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	4.05E-04
13	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	4.05E-04
14	GO:0004180: carboxypeptidase activity	4.05E-04
15	GO:0004148: dihydrolipoyl dehydrogenase activity	4.05E-04
16	GO:0017057: 6-phosphogluconolactonase activity	5.82E-04
17	GO:0001872: (1->3)-beta-D-glucan binding	5.82E-04
18	GO:0003878: ATP citrate synthase activity	5.82E-04
19	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	7.73E-04
20	GO:0004506: squalene monooxygenase activity	7.73E-04
21	GO:0070628: proteasome binding	7.73E-04
22	GO:0017137: Rab GTPase binding	9.77E-04
23	GO:0042578: phosphoric ester hydrolase activity	1.19E-03
24	GO:0031593: polyubiquitin binding	1.19E-03
25	GO:0005096: GTPase activator activity	1.58E-03
26	GO:0004674: protein serine/threonine kinase activity	1.90E-03
27	GO:0043022: ribosome binding	1.93E-03
28	GO:0004033: aldo-keto reductase (NADP) activity	1.93E-03
29	GO:0005384: manganese ion transmembrane transporter activity	2.79E-03
30	GO:0005089: Rho guanyl-nucleotide exchange factor activity	3.42E-03
31	GO:0003777: microtubule motor activity	3.62E-03
32	GO:0008081: phosphoric diester hydrolase activity	4.09E-03
33	GO:0015095: magnesium ion transmembrane transporter activity	4.09E-03
34	GO:0004565: beta-galactosidase activity	4.09E-03
35	GO:0008131: primary amine oxidase activity	4.44E-03
36	GO:0004190: aspartic-type endopeptidase activity	4.80E-03
37	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	5.18E-03
38	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	5.18E-03
39	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	5.18E-03
40	GO:0043130: ubiquitin binding	5.56E-03
41	GO:0005528: FK506 binding	5.56E-03
42	GO:0015079: potassium ion transmembrane transporter activity	5.95E-03
43	GO:0016829: lyase activity	6.27E-03
44	GO:0004176: ATP-dependent peptidase activity	6.35E-03
45	GO:0033612: receptor serine/threonine kinase binding	6.35E-03
46	GO:0019706: protein-cysteine S-palmitoyltransferase activity	6.35E-03
47	GO:0004707: MAP kinase activity	6.35E-03
48	GO:0008017: microtubule binding	8.37E-03
49	GO:0042802: identical protein binding	1.02E-02
50	GO:0003684: damaged DNA binding	1.19E-02
51	GO:0016788: hydrolase activity, acting on ester bonds	1.26E-02
52	GO:0050660: flavin adenine dinucleotide binding	1.44E-02
53	GO:0030247: polysaccharide binding	1.51E-02
54	GO:0008236: serine-type peptidase activity	1.57E-02
55	GO:0052689: carboxylic ester hydrolase activity	1.70E-02
56	GO:0003746: translation elongation factor activity	1.92E-02
57	GO:0035091: phosphatidylinositol binding	2.43E-02
58	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.57E-02
59	GO:0016491: oxidoreductase activity	2.98E-02
60	GO:0005515: protein binding	3.07E-02
61	GO:0004672: protein kinase activity	3.41E-02
62	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.43E-02
63	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.43E-02
64	GO:0004650: polygalacturonase activity	3.43E-02
65	GO:0015035: protein disulfide oxidoreductase activity	3.73E-02
66	GO:0016746: transferase activity, transferring acyl groups	3.73E-02
67	GO:0004252: serine-type endopeptidase activity	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0043233: organelle lumen	0.00E+00
2	GO:0005886: plasma membrane	3.07E-04
3	GO:0005782: peroxisomal matrix	4.05E-04
4	GO:0009346: citrate lyase complex	5.82E-04
5	GO:0030660: Golgi-associated vesicle membrane	7.73E-04
6	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	7.73E-04
7	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.93E-03
8	GO:0008180: COP9 signalosome	2.49E-03
9	GO:0016324: apical plasma membrane	3.10E-03
10	GO:0005765: lysosomal membrane	3.42E-03
11	GO:0009570: chloroplast stroma	3.56E-03
12	GO:0030659: cytoplasmic vesicle membrane	4.44E-03
13	GO:0009543: chloroplast thylakoid lumen	5.80E-03
14	GO:0005871: kinesin complex	8.05E-03
15	GO:0005770: late endosome	8.95E-03
16	GO:0005777: peroxisome	1.03E-02
17	GO:0030529: intracellular ribonucleoprotein complex	1.35E-02
18	GO:0005874: microtubule	1.49E-02
19	GO:0031969: chloroplast membrane	1.54E-02
20	GO:0019005: SCF ubiquitin ligase complex	1.62E-02
21	GO:0009941: chloroplast envelope	1.74E-02
22	GO:0009507: chloroplast	2.01E-02
23	GO:0031977: thylakoid lumen	2.17E-02
24	GO:0009536: plastid	2.73E-02
25	GO:0009505: plant-type cell wall	2.80E-02
26	GO:0000502: proteasome complex	2.84E-02
27	GO:0010008: endosome membrane	3.28E-02
28	GO:0012505: endomembrane system	3.58E-02
29	GO:0005623: cell	4.37E-02
30	GO:0009579: thylakoid	4.80E-02