GO Enrichment Analysis of Co-expressed Genes with
AT5G59250
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000505: regulation of energy homeostasis | 0.00E+00 |
| 2 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 3 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 4 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 5 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 6 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 7 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 8 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 9 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 6.48E-06 |
| 10 | GO:0080051: cutin transport | 1.20E-04 |
| 11 | GO:0010028: xanthophyll cycle | 1.20E-04 |
| 12 | GO:0051262: protein tetramerization | 2.77E-04 |
| 13 | GO:0015908: fatty acid transport | 2.77E-04 |
| 14 | GO:0043255: regulation of carbohydrate biosynthetic process | 2.77E-04 |
| 15 | GO:0010541: acropetal auxin transport | 2.77E-04 |
| 16 | GO:0016122: xanthophyll metabolic process | 2.77E-04 |
| 17 | GO:0010143: cutin biosynthetic process | 2.94E-04 |
| 18 | GO:0006833: water transport | 3.68E-04 |
| 19 | GO:0010160: formation of animal organ boundary | 4.58E-04 |
| 20 | GO:0000280: nuclear division | 4.58E-04 |
| 21 | GO:0006518: peptide metabolic process | 4.58E-04 |
| 22 | GO:0071398: cellular response to fatty acid | 4.58E-04 |
| 23 | GO:2001295: malonyl-CoA biosynthetic process | 4.58E-04 |
| 24 | GO:0007231: osmosensory signaling pathway | 6.57E-04 |
| 25 | GO:0051639: actin filament network formation | 6.57E-04 |
| 26 | GO:0080170: hydrogen peroxide transmembrane transport | 6.57E-04 |
| 27 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 6.57E-04 |
| 28 | GO:1901332: negative regulation of lateral root development | 6.57E-04 |
| 29 | GO:0034220: ion transmembrane transport | 7.45E-04 |
| 30 | GO:0051764: actin crosslink formation | 8.72E-04 |
| 31 | GO:0045727: positive regulation of translation | 8.72E-04 |
| 32 | GO:0015994: chlorophyll metabolic process | 8.72E-04 |
| 33 | GO:0033500: carbohydrate homeostasis | 8.72E-04 |
| 34 | GO:0010021: amylopectin biosynthetic process | 8.72E-04 |
| 35 | GO:0010222: stem vascular tissue pattern formation | 8.72E-04 |
| 36 | GO:0006461: protein complex assembly | 1.10E-03 |
| 37 | GO:0008152: metabolic process | 1.13E-03 |
| 38 | GO:0042549: photosystem II stabilization | 1.35E-03 |
| 39 | GO:0010256: endomembrane system organization | 1.35E-03 |
| 40 | GO:0009913: epidermal cell differentiation | 1.35E-03 |
| 41 | GO:0060918: auxin transport | 1.35E-03 |
| 42 | GO:0010337: regulation of salicylic acid metabolic process | 1.35E-03 |
| 43 | GO:0010196: nonphotochemical quenching | 1.89E-03 |
| 44 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.19E-03 |
| 45 | GO:0071482: cellular response to light stimulus | 2.50E-03 |
| 46 | GO:0009657: plastid organization | 2.50E-03 |
| 47 | GO:0032544: plastid translation | 2.50E-03 |
| 48 | GO:0006631: fatty acid metabolic process | 2.70E-03 |
| 49 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 2.82E-03 |
| 50 | GO:0006810: transport | 3.21E-03 |
| 51 | GO:0006032: chitin catabolic process | 3.51E-03 |
| 52 | GO:0015979: photosynthesis | 3.82E-03 |
| 53 | GO:0009684: indoleacetic acid biosynthetic process | 3.88E-03 |
| 54 | GO:0006816: calcium ion transport | 3.88E-03 |
| 55 | GO:0009773: photosynthetic electron transport in photosystem I | 3.88E-03 |
| 56 | GO:0045454: cell redox homeostasis | 4.06E-03 |
| 57 | GO:0008361: regulation of cell size | 4.26E-03 |
| 58 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.26E-03 |
| 59 | GO:0010588: cotyledon vascular tissue pattern formation | 4.64E-03 |
| 60 | GO:0010540: basipetal auxin transport | 5.04E-03 |
| 61 | GO:0009825: multidimensional cell growth | 5.46E-03 |
| 62 | GO:0010167: response to nitrate | 5.46E-03 |
| 63 | GO:0070588: calcium ion transmembrane transport | 5.46E-03 |
| 64 | GO:0010053: root epidermal cell differentiation | 5.46E-03 |
| 65 | GO:0051017: actin filament bundle assembly | 6.32E-03 |
| 66 | GO:0009414: response to water deprivation | 6.54E-03 |
| 67 | GO:0016575: histone deacetylation | 6.76E-03 |
| 68 | GO:0007017: microtubule-based process | 6.76E-03 |
| 69 | GO:0061077: chaperone-mediated protein folding | 7.22E-03 |
| 70 | GO:0016998: cell wall macromolecule catabolic process | 7.22E-03 |
| 71 | GO:0009693: ethylene biosynthetic process | 8.18E-03 |
| 72 | GO:0048443: stamen development | 8.66E-03 |
| 73 | GO:0007623: circadian rhythm | 9.64E-03 |
| 74 | GO:0009735: response to cytokinin | 9.79E-03 |
| 75 | GO:0009958: positive gravitropism | 1.02E-02 |
| 76 | GO:0006662: glycerol ether metabolic process | 1.02E-02 |
| 77 | GO:0048825: cotyledon development | 1.13E-02 |
| 78 | GO:0019252: starch biosynthetic process | 1.13E-02 |
| 79 | GO:1901657: glycosyl compound metabolic process | 1.30E-02 |
| 80 | GO:0009651: response to salt stress | 1.35E-02 |
| 81 | GO:0009639: response to red or far red light | 1.36E-02 |
| 82 | GO:0055085: transmembrane transport | 1.48E-02 |
| 83 | GO:0010027: thylakoid membrane organization | 1.54E-02 |
| 84 | GO:0042128: nitrate assimilation | 1.66E-02 |
| 85 | GO:0009817: defense response to fungus, incompatible interaction | 1.85E-02 |
| 86 | GO:0030244: cellulose biosynthetic process | 1.85E-02 |
| 87 | GO:0010311: lateral root formation | 1.92E-02 |
| 88 | GO:0010218: response to far red light | 1.99E-02 |
| 89 | GO:0048527: lateral root development | 2.05E-02 |
| 90 | GO:0006865: amino acid transport | 2.12E-02 |
| 91 | GO:0009637: response to blue light | 2.19E-02 |
| 92 | GO:0034599: cellular response to oxidative stress | 2.26E-02 |
| 93 | GO:0009640: photomorphogenesis | 2.63E-02 |
| 94 | GO:0032259: methylation | 2.63E-02 |
| 95 | GO:0009926: auxin polar transport | 2.63E-02 |
| 96 | GO:0016042: lipid catabolic process | 2.67E-02 |
| 97 | GO:0009408: response to heat | 2.74E-02 |
| 98 | GO:0009664: plant-type cell wall organization | 3.09E-02 |
| 99 | GO:0009809: lignin biosynthetic process | 3.25E-02 |
| 100 | GO:0006364: rRNA processing | 3.25E-02 |
| 101 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.33E-02 |
| 102 | GO:0006857: oligopeptide transport | 3.41E-02 |
| 103 | GO:0009734: auxin-activated signaling pathway | 3.86E-02 |
| 104 | GO:0009624: response to nematode | 4.17E-02 |
| 105 | GO:0005975: carbohydrate metabolic process | 4.47E-02 |
| 106 | GO:0009611: response to wounding | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 2 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 3 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 5 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 6 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 7 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 8 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.22E-05 |
| 9 | GO:0004017: adenylate kinase activity | 4.28E-05 |
| 10 | GO:0005227: calcium activated cation channel activity | 1.20E-04 |
| 11 | GO:0015245: fatty acid transporter activity | 1.20E-04 |
| 12 | GO:0033201: alpha-1,4-glucan synthase activity | 2.77E-04 |
| 13 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.77E-04 |
| 14 | GO:0070330: aromatase activity | 4.58E-04 |
| 15 | GO:0004373: glycogen (starch) synthase activity | 4.58E-04 |
| 16 | GO:0050734: hydroxycinnamoyltransferase activity | 4.58E-04 |
| 17 | GO:0004075: biotin carboxylase activity | 4.58E-04 |
| 18 | GO:0019201: nucleotide kinase activity | 6.57E-04 |
| 19 | GO:0048487: beta-tubulin binding | 6.57E-04 |
| 20 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 8.72E-04 |
| 21 | GO:0009011: starch synthase activity | 8.72E-04 |
| 22 | GO:0048038: quinone binding | 9.78E-04 |
| 23 | GO:0004040: amidase activity | 1.10E-03 |
| 24 | GO:0018685: alkane 1-monooxygenase activity | 1.10E-03 |
| 25 | GO:0003989: acetyl-CoA carboxylase activity | 1.10E-03 |
| 26 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.35E-03 |
| 27 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.35E-03 |
| 28 | GO:0015250: water channel activity | 1.39E-03 |
| 29 | GO:0005261: cation channel activity | 1.61E-03 |
| 30 | GO:0016787: hydrolase activity | 1.73E-03 |
| 31 | GO:0004033: aldo-keto reductase (NADP) activity | 2.19E-03 |
| 32 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 2.50E-03 |
| 33 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 2.82E-03 |
| 34 | GO:0004568: chitinase activity | 3.51E-03 |
| 35 | GO:0044183: protein binding involved in protein folding | 3.88E-03 |
| 36 | GO:0047372: acylglycerol lipase activity | 3.88E-03 |
| 37 | GO:0005262: calcium channel activity | 4.64E-03 |
| 38 | GO:0004565: beta-galactosidase activity | 4.64E-03 |
| 39 | GO:0010329: auxin efflux transmembrane transporter activity | 4.64E-03 |
| 40 | GO:0008266: poly(U) RNA binding | 5.04E-03 |
| 41 | GO:0031418: L-ascorbic acid binding | 6.32E-03 |
| 42 | GO:0004407: histone deacetylase activity | 6.32E-03 |
| 43 | GO:0005528: FK506 binding | 6.32E-03 |
| 44 | GO:0004176: ATP-dependent peptidase activity | 7.22E-03 |
| 45 | GO:0030570: pectate lyase activity | 8.18E-03 |
| 46 | GO:0047134: protein-disulfide reductase activity | 9.17E-03 |
| 47 | GO:0004791: thioredoxin-disulfide reductase activity | 1.07E-02 |
| 48 | GO:0050662: coenzyme binding | 1.07E-02 |
| 49 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.23E-02 |
| 50 | GO:0004518: nuclease activity | 1.24E-02 |
| 51 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.30E-02 |
| 52 | GO:0051015: actin filament binding | 1.30E-02 |
| 53 | GO:0016791: phosphatase activity | 1.36E-02 |
| 54 | GO:0005200: structural constituent of cytoskeleton | 1.41E-02 |
| 55 | GO:0008168: methyltransferase activity | 1.44E-02 |
| 56 | GO:0016788: hydrolase activity, acting on ester bonds | 1.52E-02 |
| 57 | GO:0102483: scopolin beta-glucosidase activity | 1.72E-02 |
| 58 | GO:0030247: polysaccharide binding | 1.72E-02 |
| 59 | GO:0004721: phosphoprotein phosphatase activity | 1.72E-02 |
| 60 | GO:0005096: GTPase activator activity | 1.92E-02 |
| 61 | GO:0004222: metalloendopeptidase activity | 1.99E-02 |
| 62 | GO:0052689: carboxylic ester hydrolase activity | 2.05E-02 |
| 63 | GO:0008422: beta-glucosidase activity | 2.33E-02 |
| 64 | GO:0042803: protein homodimerization activity | 2.33E-02 |
| 65 | GO:0004185: serine-type carboxypeptidase activity | 2.63E-02 |
| 66 | GO:0043621: protein self-association | 2.78E-02 |
| 67 | GO:0005198: structural molecule activity | 2.85E-02 |
| 68 | GO:0015293: symporter activity | 2.85E-02 |
| 69 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.93E-02 |
| 70 | GO:0015171: amino acid transmembrane transporter activity | 3.49E-02 |
| 71 | GO:0031625: ubiquitin protein ligase binding | 3.49E-02 |
| 72 | GO:0015035: protein disulfide oxidoreductase activity | 4.26E-02 |
| 73 | GO:0016746: transferase activity, transferring acyl groups | 4.26E-02 |
| 74 | GO:0019843: rRNA binding | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.88E-16 |
| 3 | GO:0009534: chloroplast thylakoid | 1.28E-15 |
| 4 | GO:0009570: chloroplast stroma | 2.17E-13 |
| 5 | GO:0009941: chloroplast envelope | 2.41E-09 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 2.65E-09 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 7.15E-06 |
| 8 | GO:0030095: chloroplast photosystem II | 8.15E-06 |
| 9 | GO:0031977: thylakoid lumen | 1.73E-05 |
| 10 | GO:0010287: plastoglobule | 9.92E-05 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.17E-04 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 4.51E-04 |
| 13 | GO:0042651: thylakoid membrane | 4.51E-04 |
| 14 | GO:0009897: external side of plasma membrane | 4.58E-04 |
| 15 | GO:0009579: thylakoid | 6.54E-04 |
| 16 | GO:0009531: secondary cell wall | 6.57E-04 |
| 17 | GO:0032432: actin filament bundle | 6.57E-04 |
| 18 | GO:0019898: extrinsic component of membrane | 9.17E-04 |
| 19 | GO:0009533: chloroplast stromal thylakoid | 1.89E-03 |
| 20 | GO:0009501: amyloplast | 2.19E-03 |
| 21 | GO:0009505: plant-type cell wall | 2.43E-03 |
| 22 | GO:0042644: chloroplast nucleoid | 2.82E-03 |
| 23 | GO:0045298: tubulin complex | 2.82E-03 |
| 24 | GO:0005884: actin filament | 3.88E-03 |
| 25 | GO:0009508: plastid chromosome | 4.64E-03 |
| 26 | GO:0005887: integral component of plasma membrane | 7.80E-03 |
| 27 | GO:0009523: photosystem II | 1.13E-02 |
| 28 | GO:0016020: membrane | 1.26E-02 |
| 29 | GO:0009295: nucleoid | 1.41E-02 |
| 30 | GO:0005618: cell wall | 1.80E-02 |
| 31 | GO:0031969: chloroplast membrane | 1.86E-02 |
| 32 | GO:0005773: vacuole | 2.94E-02 |
| 33 | GO:0048046: apoplast | 4.61E-02 |