Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G58710

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901137: carbohydrate derivative biosynthetic process0.00E+00
2GO:0045047: protein targeting to ER0.00E+00
3GO:0019307: mannose biosynthetic process0.00E+00
4GO:0072722: response to amitrole0.00E+00
5GO:0006042: glucosamine biosynthetic process0.00E+00
6GO:0034976: response to endoplasmic reticulum stress6.72E-12
7GO:0046686: response to cadmium ion7.54E-10
8GO:0009617: response to bacterium8.40E-10
9GO:0006457: protein folding2.57E-09
10GO:0045454: cell redox homeostasis2.10E-08
11GO:0009627: systemic acquired resistance1.02E-07
12GO:0006099: tricarboxylic acid cycle4.19E-07
13GO:0042742: defense response to bacterium2.55E-06
14GO:0000162: tryptophan biosynthetic process2.57E-06
15GO:0006979: response to oxidative stress2.65E-06
16GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine3.65E-06
17GO:0009651: response to salt stress5.05E-06
18GO:0006102: isocitrate metabolic process6.75E-06
19GO:0009697: salicylic acid biosynthetic process8.37E-05
20GO:0018279: protein N-linked glycosylation via asparagine8.37E-05
21GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.67E-04
22GO:0009306: protein secretion1.88E-04
23GO:0010150: leaf senescence2.26E-04
24GO:0030091: protein repair2.76E-04
25GO:0006605: protein targeting2.76E-04
26GO:0006047: UDP-N-acetylglucosamine metabolic process2.82E-04
27GO:1990641: response to iron ion starvation2.82E-04
28GO:0043903: regulation of symbiosis, encompassing mutualism through parasitism2.82E-04
29GO:0009700: indole phytoalexin biosynthetic process2.82E-04
30GO:0043687: post-translational protein modification2.82E-04
31GO:0010230: alternative respiration2.82E-04
32GO:0043266: regulation of potassium ion transport2.82E-04
33GO:0050691: regulation of defense response to virus by host2.82E-04
34GO:0051775: response to redox state2.82E-04
35GO:0042964: thioredoxin reduction2.82E-04
36GO:0046244: salicylic acid catabolic process2.82E-04
37GO:0010266: response to vitamin B12.82E-04
38GO:0019276: UDP-N-acetylgalactosamine metabolic process2.82E-04
39GO:0034975: protein folding in endoplasmic reticulum2.82E-04
40GO:0010120: camalexin biosynthetic process3.40E-04
41GO:0030968: endoplasmic reticulum unfolded protein response3.40E-04
42GO:0010112: regulation of systemic acquired resistance4.10E-04
43GO:0009553: embryo sac development5.30E-04
44GO:0006101: citrate metabolic process6.19E-04
45GO:0044419: interspecies interaction between organisms6.19E-04
46GO:0030003: cellular cation homeostasis6.19E-04
47GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.19E-04
48GO:0009682: induced systemic resistance6.54E-04
49GO:0015031: protein transport6.88E-04
50GO:0002237: response to molecule of bacterial origin9.50E-04
51GO:0006011: UDP-glucose metabolic process1.00E-03
52GO:0010272: response to silver ion1.00E-03
53GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.00E-03
54GO:0006013: mannose metabolic process1.00E-03
55GO:0055074: calcium ion homeostasis1.00E-03
56GO:0002239: response to oomycetes1.44E-03
57GO:0072334: UDP-galactose transmembrane transport1.44E-03
58GO:0033014: tetrapyrrole biosynthetic process1.44E-03
59GO:0010116: positive regulation of abscisic acid biosynthetic process1.44E-03
60GO:0009298: GDP-mannose biosynthetic process1.44E-03
61GO:0031348: negative regulation of defense response1.72E-03
62GO:0071456: cellular response to hypoxia1.72E-03
63GO:0055114: oxidation-reduction process1.82E-03
64GO:0051365: cellular response to potassium ion starvation1.92E-03
65GO:0045088: regulation of innate immune response1.92E-03
66GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway1.92E-03
67GO:0006511: ubiquitin-dependent protein catabolic process1.97E-03
68GO:0000304: response to singlet oxygen2.46E-03
69GO:0034052: positive regulation of plant-type hypersensitive response2.46E-03
70GO:0046283: anthocyanin-containing compound metabolic process2.46E-03
71GO:0006097: glyoxylate cycle2.46E-03
72GO:0048316: seed development2.71E-03
73GO:0009626: plant-type hypersensitive response2.82E-03
74GO:0009851: auxin biosynthetic process2.97E-03
75GO:0010256: endomembrane system organization3.03E-03
76GO:0047484: regulation of response to osmotic stress3.03E-03
77GO:0042372: phylloquinone biosynthetic process3.65E-03
78GO:0009423: chorismate biosynthetic process3.65E-03
79GO:0010555: response to mannitol3.65E-03
80GO:0009610: response to symbiotic fungus4.30E-03
81GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c4.30E-03
82GO:1902074: response to salt4.30E-03
83GO:0009615: response to virus4.59E-03
84GO:0006886: intracellular protein transport4.72E-03
85GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.99E-03
86GO:0006875: cellular metal ion homeostasis4.99E-03
87GO:0031540: regulation of anthocyanin biosynthetic process4.99E-03
88GO:0055075: potassium ion homeostasis4.99E-03
89GO:0009699: phenylpropanoid biosynthetic process5.72E-03
90GO:0019430: removal of superoxide radicals5.72E-03
91GO:0010204: defense response signaling pathway, resistance gene-independent5.72E-03
92GO:0009808: lignin metabolic process5.72E-03
93GO:0009751: response to salicylic acid6.06E-03
94GO:0098656: anion transmembrane transport6.48E-03
95GO:0046685: response to arsenic-containing substance6.48E-03
96GO:0006783: heme biosynthetic process6.48E-03
97GO:0015780: nucleotide-sugar transport6.48E-03
98GO:0010043: response to zinc ion6.92E-03
99GO:0010205: photoinhibition7.28E-03
100GO:0043067: regulation of programmed cell death7.28E-03
101GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.28E-03
102GO:0006032: chitin catabolic process8.11E-03
103GO:0009688: abscisic acid biosynthetic process8.11E-03
104GO:0006816: calcium ion transport8.97E-03
105GO:0009089: lysine biosynthetic process via diaminopimelate8.97E-03
106GO:0052544: defense response by callose deposition in cell wall8.97E-03
107GO:0009073: aromatic amino acid family biosynthetic process8.97E-03
108GO:0000272: polysaccharide catabolic process8.97E-03
109GO:0006952: defense response9.21E-03
110GO:0042542: response to hydrogen peroxide9.41E-03
111GO:0051707: response to other organism9.80E-03
112GO:0006790: sulfur compound metabolic process9.88E-03
113GO:0006820: anion transport9.88E-03
114GO:0002213: defense response to insect9.88E-03
115GO:0006094: gluconeogenesis1.08E-02
116GO:0018107: peptidyl-threonine phosphorylation1.08E-02
117GO:0010075: regulation of meristem growth1.08E-02
118GO:0009934: regulation of meristem structural organization1.18E-02
119GO:0006541: glutamine metabolic process1.18E-02
120GO:0009846: pollen germination1.23E-02
121GO:0046688: response to copper ion1.28E-02
122GO:0019853: L-ascorbic acid biosynthetic process1.28E-02
123GO:0046854: phosphatidylinositol phosphorylation1.28E-02
124GO:0006486: protein glycosylation1.32E-02
125GO:0051603: proteolysis involved in cellular protein catabolic process1.37E-02
126GO:0009863: salicylic acid mediated signaling pathway1.48E-02
127GO:0080147: root hair cell development1.48E-02
128GO:0009555: pollen development1.48E-02
129GO:0006487: protein N-linked glycosylation1.48E-02
130GO:0006096: glycolytic process1.57E-02
131GO:0006874: cellular calcium ion homeostasis1.59E-02
132GO:0009695: jasmonic acid biosynthetic process1.59E-02
133GO:0006825: copper ion transport1.59E-02
134GO:0016192: vesicle-mediated transport1.62E-02
135GO:0031408: oxylipin biosynthetic process1.70E-02
136GO:0016998: cell wall macromolecule catabolic process1.70E-02
137GO:0030433: ubiquitin-dependent ERAD pathway1.81E-02
138GO:0019748: secondary metabolic process1.81E-02
139GO:0009411: response to UV1.93E-02
140GO:0009625: response to insect1.93E-02
141GO:0010227: floral organ abscission1.93E-02
142GO:0010118: stomatal movement2.29E-02
143GO:0009409: response to cold2.32E-02
144GO:0010154: fruit development2.42E-02
145GO:0010197: polar nucleus fusion2.42E-02
146GO:0048868: pollen tube development2.42E-02
147GO:0009408: response to heat2.48E-02
148GO:0080156: mitochondrial mRNA modification2.81E-02
149GO:0002229: defense response to oomycetes2.81E-02
150GO:0000302: response to reactive oxygen species2.81E-02
151GO:0007264: small GTPase mediated signal transduction2.94E-02
152GO:0009630: gravitropism2.94E-02
153GO:0006413: translational initiation3.05E-02
154GO:0030163: protein catabolic process3.08E-02
155GO:1901657: glycosyl compound metabolic process3.08E-02
156GO:0009567: double fertilization forming a zygote and endosperm3.22E-02
157GO:0006464: cellular protein modification process3.22E-02
158GO:0016126: sterol biosynthetic process3.65E-02
159GO:0006906: vesicle fusion3.95E-02
160GO:0009414: response to water deprivation4.03E-02
161GO:0015995: chlorophyll biosynthetic process4.10E-02
162GO:0016311: dephosphorylation4.25E-02
163GO:0016049: cell growth4.25E-02
164GO:0009817: defense response to fungus, incompatible interaction4.41E-02
165GO:0008219: cell death4.41E-02
166GO:0006468: protein phosphorylation4.49E-02
167GO:0009735: response to cytokinin4.50E-02
168GO:0006499: N-terminal protein myristoylation4.72E-02
169GO:0009407: toxin catabolic process4.72E-02
170GO:0007568: aging4.88E-02
RankGO TermAdjusted P value
1GO:0004615: phosphomannomutase activity0.00E+00
2GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
3GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
4GO:0004631: phosphomevalonate kinase activity0.00E+00
5GO:0050220: prostaglandin-E synthase activity0.00E+00
6GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
7GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity0.00E+00
8GO:0004107: chorismate synthase activity0.00E+00
9GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
10GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity0.00E+00
11GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity0.00E+00
12GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity0.00E+00
13GO:0003756: protein disulfide isomerase activity7.00E-11
14GO:0004298: threonine-type endopeptidase activity1.11E-07
15GO:0008233: peptidase activity1.78E-05
16GO:0005507: copper ion binding2.75E-05
17GO:0004449: isocitrate dehydrogenase (NAD+) activity2.94E-05
18GO:0005460: UDP-glucose transmembrane transporter activity2.94E-05
19GO:0051082: unfolded protein binding7.23E-05
20GO:0005459: UDP-galactose transmembrane transporter activity8.37E-05
21GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity8.37E-05
22GO:0033743: peptide-methionine (R)-S-oxide reductase activity1.67E-04
23GO:0008320: protein transmembrane transporter activity2.19E-04
24GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity2.82E-04
25GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity2.82E-04
26GO:0004425: indole-3-glycerol-phosphate synthase activity2.82E-04
27GO:0033984: indole-3-glycerol-phosphate lyase activity2.82E-04
28GO:0097367: carbohydrate derivative binding2.82E-04
29GO:0004048: anthranilate phosphoribosyltransferase activity2.82E-04
30GO:0048037: cofactor binding2.82E-04
31GO:0004321: fatty-acyl-CoA synthase activity2.82E-04
32GO:0008909: isochorismate synthase activity2.82E-04
33GO:0004325: ferrochelatase activity2.82E-04
34GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity2.82E-04
35GO:0010285: L,L-diaminopimelate aminotransferase activity2.82E-04
36GO:0003994: aconitate hydratase activity6.19E-04
37GO:0004775: succinate-CoA ligase (ADP-forming) activity6.19E-04
38GO:0004338: glucan exo-1,3-beta-glucosidase activity6.19E-04
39GO:0004776: succinate-CoA ligase (GDP-forming) activity6.19E-04
40GO:0000030: mannosyltransferase activity1.00E-03
41GO:0016531: copper chaperone activity1.00E-03
42GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.00E-03
43GO:0004148: dihydrolipoyl dehydrogenase activity1.00E-03
44GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity1.00E-03
45GO:0004049: anthranilate synthase activity1.00E-03
46GO:0005509: calcium ion binding1.10E-03
47GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.44E-03
48GO:0035529: NADH pyrophosphatase activity1.44E-03
49GO:0016656: monodehydroascorbate reductase (NADH) activity1.44E-03
50GO:0051287: NAD binding1.83E-03
51GO:0004834: tryptophan synthase activity1.92E-03
52GO:0004031: aldehyde oxidase activity1.92E-03
53GO:0050302: indole-3-acetaldehyde oxidase activity1.92E-03
54GO:0004576: oligosaccharyl transferase activity1.92E-03
55GO:0016004: phospholipase activator activity1.92E-03
56GO:0005496: steroid binding2.46E-03
57GO:0047631: ADP-ribose diphosphatase activity2.46E-03
58GO:0000210: NAD+ diphosphatase activity3.03E-03
59GO:0004029: aldehyde dehydrogenase (NAD) activity3.03E-03
60GO:0050660: flavin adenine dinucleotide binding3.08E-03
61GO:0015035: protein disulfide oxidoreductase activity3.42E-03
62GO:0051920: peroxiredoxin activity3.65E-03
63GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.65E-03
64GO:0005261: cation channel activity3.65E-03
65GO:0004656: procollagen-proline 4-dioxygenase activity3.65E-03
66GO:0008113: peptide-methionine (S)-S-oxide reductase activity3.65E-03
67GO:0008483: transaminase activity4.08E-03
68GO:0008121: ubiquinol-cytochrome-c reductase activity4.30E-03
69GO:0015288: porin activity4.99E-03
70GO:0016209: antioxidant activity4.99E-03
71GO:0030247: polysaccharide binding5.40E-03
72GO:0008135: translation factor activity, RNA binding5.72E-03
73GO:0008308: voltage-gated anion channel activity5.72E-03
74GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity5.98E-03
75GO:0016207: 4-coumarate-CoA ligase activity6.48E-03
76GO:0004674: protein serine/threonine kinase activity6.84E-03
77GO:0009055: electron carrier activity6.89E-03
78GO:0016614: oxidoreductase activity, acting on CH-OH group of donors6.92E-03
79GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity7.28E-03
80GO:0004743: pyruvate kinase activity7.28E-03
81GO:0030955: potassium ion binding7.28E-03
82GO:0003746: translation elongation factor activity7.59E-03
83GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors7.59E-03
84GO:0004568: chitinase activity8.11E-03
85GO:0016301: kinase activity8.16E-03
86GO:0004129: cytochrome-c oxidase activity8.97E-03
87GO:0005525: GTP binding9.67E-03
88GO:0005262: calcium channel activity1.08E-02
89GO:0004022: alcohol dehydrogenase (NAD) activity1.08E-02
90GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.18E-02
91GO:0008061: chitin binding1.28E-02
92GO:0004970: ionotropic glutamate receptor activity1.28E-02
93GO:0005217: intracellular ligand-gated ion channel activity1.28E-02
94GO:0004190: aspartic-type endopeptidase activity1.28E-02
95GO:0005506: iron ion binding1.35E-02
96GO:0031418: L-ascorbic acid binding1.48E-02
97GO:0016779: nucleotidyltransferase activity1.81E-02
98GO:0008810: cellulase activity1.93E-02
99GO:0016746: transferase activity, transferring acyl groups1.95E-02
100GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.10E-02
101GO:0004791: thioredoxin-disulfide reductase activity2.54E-02
102GO:0016853: isomerase activity2.54E-02
103GO:0010181: FMN binding2.54E-02
104GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.08E-02
105GO:0051213: dioxygenase activity3.65E-02
106GO:0003743: translation initiation factor activity3.81E-02
107GO:0102483: scopolin beta-glucosidase activity4.10E-02
108GO:0004683: calmodulin-dependent protein kinase activity4.10E-02
109GO:0042802: identical protein binding4.14E-02
110GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.25E-02
111GO:0005524: ATP binding4.49E-02
112GO:0015238: drug transmembrane transporter activity4.56E-02
113GO:0030145: manganese ion binding4.88E-02
114GO:0050897: cobalt ion binding4.88E-02
115GO:0000287: magnesium ion binding4.93E-02
RankGO TermAdjusted P value
1GO:0045252: oxoglutarate dehydrogenase complex0.00E+00
2GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
3GO:0005783: endoplasmic reticulum3.65E-21
4GO:0005788: endoplasmic reticulum lumen2.59E-18
5GO:0000502: proteasome complex9.33E-08
6GO:0005839: proteasome core complex1.11E-07
7GO:0005829: cytosol2.03E-06
8GO:0030134: ER to Golgi transport vesicle3.65E-06
9GO:0005774: vacuolar membrane5.98E-06
10GO:0019773: proteasome core complex, alpha-subunit complex9.78E-06
11GO:0009507: chloroplast1.65E-05
12GO:0008250: oligosaccharyltransferase complex8.37E-05
13GO:0005789: endoplasmic reticulum membrane8.41E-05
14GO:0048046: apoplast1.33E-04
15GO:0005773: vacuole5.02E-04
16GO:0005740: mitochondrial envelope5.67E-04
17GO:0005886: plasma membrane5.85E-04
18GO:0005750: mitochondrial respiratory chain complex III9.50E-04
19GO:0030176: integral component of endoplasmic reticulum membrane1.06E-03
20GO:0016020: membrane1.25E-03
21GO:0005741: mitochondrial outer membrane1.58E-03
22GO:0030660: Golgi-associated vesicle membrane1.92E-03
23GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.92E-03
24GO:0009536: plastid2.05E-03
25GO:0005746: mitochondrial respiratory chain2.46E-03
26GO:0032588: trans-Golgi network membrane3.03E-03
27GO:0016592: mediator complex3.39E-03
28GO:0030173: integral component of Golgi membrane3.65E-03
29GO:0005801: cis-Golgi network3.65E-03
30GO:0031595: nuclear proteasome complex4.30E-03
31GO:0005623: cell4.53E-03
32GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane4.99E-03
33GO:0016021: integral component of membrane5.23E-03
34GO:0046930: pore complex5.72E-03
35GO:0000326: protein storage vacuole5.72E-03
36GO:0005759: mitochondrial matrix5.86E-03
37GO:0031901: early endosome membrane6.48E-03
38GO:0009505: plant-type cell wall6.75E-03
39GO:0005765: lysosomal membrane8.97E-03
40GO:0005852: eukaryotic translation initiation factor 3 complex8.97E-03
41GO:0008541: proteasome regulatory particle, lid subcomplex8.97E-03
42GO:0005618: cell wall1.02E-02
43GO:0005739: mitochondrion1.10E-02
44GO:0022626: cytosolic ribosome1.38E-02
45GO:0005758: mitochondrial intermembrane space1.48E-02
46GO:0031969: chloroplast membrane1.51E-02
47GO:0032580: Golgi cisterna membrane3.22E-02
48GO:0005794: Golgi apparatus3.96E-02
49GO:0046658: anchored component of plasma membrane4.31E-02
50GO:0000325: plant-type vacuole4.88E-02
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Gene type



Gene DE type