co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G58670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046322: negative regulation of fatty acid oxidation	0.00E+00
2	GO:0042493: response to drug	0.00E+00
3	GO:0007638: mechanosensory behavior	0.00E+00
4	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
5	GO:0071555: cell wall organization	5.15E-08
6	GO:0080051: cutin transport	1.14E-04
7	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	1.14E-04
8	GO:0060627: regulation of vesicle-mediated transport	1.14E-04
9	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	1.14E-04
10	GO:0005980: glycogen catabolic process	1.14E-04
11	GO:0000032: cell wall mannoprotein biosynthetic process	1.14E-04
12	GO:0032025: response to cobalt ion	1.14E-04
13	GO:0010411: xyloglucan metabolic process	1.26E-04
14	GO:0016042: lipid catabolic process	1.31E-04
15	GO:0010541: acropetal auxin transport	2.65E-04
16	GO:0015908: fatty acid transport	2.65E-04
17	GO:0043255: regulation of carbohydrate biosynthetic process	2.65E-04
18	GO:0042546: cell wall biogenesis	3.03E-04
19	GO:0009825: multidimensional cell growth	3.08E-04
20	GO:0051017: actin filament bundle assembly	3.83E-04
21	GO:0007017: microtubule-based process	4.22E-04
22	GO:1901562: response to paraquat	4.38E-04
23	GO:0033591: response to L-ascorbic acid	4.38E-04
24	GO:0046168: glycerol-3-phosphate catabolic process	4.38E-04
25	GO:0010160: formation of animal organ boundary	4.38E-04
26	GO:0016998: cell wall macromolecule catabolic process	4.64E-04
27	GO:0030245: cellulose catabolic process	5.07E-04
28	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	5.51E-04
29	GO:0050482: arachidonic acid secretion	6.29E-04
30	GO:0009413: response to flooding	6.29E-04
31	GO:0009298: GDP-mannose biosynthetic process	6.29E-04
32	GO:0007231: osmosensory signaling pathway	6.29E-04
33	GO:0051639: actin filament network formation	6.29E-04
34	GO:0043481: anthocyanin accumulation in tissues in response to UV light	6.29E-04
35	GO:0006072: glycerol-3-phosphate metabolic process	6.29E-04
36	GO:0009650: UV protection	6.29E-04
37	GO:0010306: rhamnogalacturonan II biosynthetic process	6.29E-04
38	GO:0006869: lipid transport	7.42E-04
39	GO:0005975: carbohydrate metabolic process	7.67E-04
40	GO:0009755: hormone-mediated signaling pathway	8.35E-04
41	GO:0010222: stem vascular tissue pattern formation	8.35E-04
42	GO:0051764: actin crosslink formation	8.35E-04
43	GO:0006085: acetyl-CoA biosynthetic process	8.35E-04
44	GO:0006183: GTP biosynthetic process	8.35E-04
45	GO:0033500: carbohydrate homeostasis	8.35E-04
46	GO:0006629: lipid metabolic process	8.84E-04
47	GO:0010438: cellular response to sulfur starvation	1.05E-03
48	GO:0009828: plant-type cell wall loosening	1.10E-03
49	GO:0010337: regulation of salicylic acid metabolic process	1.29E-03
50	GO:0006014: D-ribose metabolic process	1.29E-03
51	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.29E-03
52	GO:0060918: auxin transport	1.29E-03
53	GO:0045490: pectin catabolic process	1.30E-03
54	GO:0009414: response to water deprivation	1.39E-03
55	GO:0009739: response to gibberellin	1.50E-03
56	GO:0009612: response to mechanical stimulus	1.54E-03
57	GO:0031930: mitochondria-nucleus signaling pathway	1.54E-03
58	GO:0030244: cellulose biosynthetic process	1.69E-03
59	GO:0009645: response to low light intensity stimulus	1.81E-03
60	GO:2000070: regulation of response to water deprivation	2.09E-03
61	GO:0006644: phospholipid metabolic process	2.09E-03
62	GO:0009819: drought recovery	2.09E-03
63	GO:0010439: regulation of glucosinolate biosynthetic process	2.09E-03
64	GO:0016051: carbohydrate biosynthetic process	2.13E-03
65	GO:0009826: unidimensional cell growth	2.15E-03
66	GO:0009644: response to high light intensity	2.96E-03
67	GO:0042761: very long-chain fatty acid biosynthetic process	3.02E-03
68	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.36E-03
69	GO:0006032: chitin catabolic process	3.36E-03
70	GO:0006949: syncytium formation	3.36E-03
71	GO:0009664: plant-type cell wall organization	3.43E-03
72	GO:0042538: hyperosmotic salinity response	3.43E-03
73	GO:0006486: protein glycosylation	3.68E-03
74	GO:0009684: indoleacetic acid biosynthetic process	3.71E-03
75	GO:0006816: calcium ion transport	3.71E-03
76	GO:0009682: induced systemic resistance	3.71E-03
77	GO:0010105: negative regulation of ethylene-activated signaling pathway	4.06E-03
78	GO:0008361: regulation of cell size	4.06E-03
79	GO:0016024: CDP-diacylglycerol biosynthetic process	4.06E-03
80	GO:0010588: cotyledon vascular tissue pattern formation	4.43E-03
81	GO:0010540: basipetal auxin transport	4.81E-03
82	GO:0009266: response to temperature stimulus	4.81E-03
83	GO:0010143: cutin biosynthetic process	4.81E-03
84	GO:0070588: calcium ion transmembrane transport	5.21E-03
85	GO:0010053: root epidermal cell differentiation	5.21E-03
86	GO:0009624: response to nematode	5.21E-03
87	GO:0010167: response to nitrate	5.21E-03
88	GO:0010025: wax biosynthetic process	5.61E-03
89	GO:0009833: plant-type primary cell wall biogenesis	5.61E-03
90	GO:0006833: water transport	5.61E-03
91	GO:0019953: sexual reproduction	6.45E-03
92	GO:0010431: seed maturation	6.89E-03
93	GO:0031348: negative regulation of defense response	7.34E-03
94	GO:0009411: response to UV	7.79E-03
95	GO:0009625: response to insect	7.79E-03
96	GO:0048443: stamen development	8.26E-03
97	GO:0006284: base-excision repair	8.26E-03
98	GO:0019722: calcium-mediated signaling	8.26E-03
99	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.74E-03
100	GO:0034220: ion transmembrane transport	9.23E-03
101	GO:0042335: cuticle development	9.23E-03
102	GO:0048868: pollen tube development	9.73E-03
103	GO:0009958: positive gravitropism	9.73E-03
104	GO:0007166: cell surface receptor signaling pathway	1.03E-02
105	GO:0009611: response to wounding	1.03E-02
106	GO:0019252: starch biosynthetic process	1.08E-02
107	GO:0010583: response to cyclopentenone	1.18E-02
108	GO:0009639: response to red or far red light	1.29E-02
109	GO:0007267: cell-cell signaling	1.35E-02
110	GO:0051607: defense response to virus	1.40E-02
111	GO:0042128: nitrate assimilation	1.58E-02
112	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.79E-02
113	GO:0009832: plant-type cell wall biogenesis	1.83E-02
114	GO:0010218: response to far red light	1.89E-02
115	GO:0010043: response to zinc ion	1.96E-02
116	GO:0048527: lateral root development	1.96E-02
117	GO:0045087: innate immune response	2.09E-02
118	GO:0009637: response to blue light	2.09E-02
119	GO:0009867: jasmonic acid mediated signaling pathway	2.09E-02
120	GO:0006631: fatty acid metabolic process	2.36E-02
121	GO:0010114: response to red light	2.50E-02
122	GO:0009926: auxin polar transport	2.50E-02
123	GO:0009640: photomorphogenesis	2.50E-02
124	GO:0009408: response to heat	2.56E-02
125	GO:0006281: DNA repair	2.56E-02
126	GO:0009753: response to jasmonic acid	2.75E-02
127	GO:0009809: lignin biosynthetic process	3.09E-02
128	GO:0006857: oligopeptide transport	3.25E-02
129	GO:0009740: gibberellic acid mediated signaling pathway	3.81E-02

Rank	GO Term	Adjusted P value
1	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
2	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
3	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
4	GO:0052689: carboxylic ester hydrolase activity	6.27E-06
5	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.60E-05
6	GO:0030570: pectate lyase activity	2.42E-05
7	GO:0016762: xyloglucan:xyloglucosyl transferase activity	5.65E-05
8	GO:0004645: phosphorylase activity	1.14E-04
9	GO:0004476: mannose-6-phosphate isomerase activity	1.14E-04
10	GO:0015245: fatty acid transporter activity	1.14E-04
11	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.14E-04
12	GO:0008184: glycogen phosphorylase activity	1.14E-04
13	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	1.14E-04
14	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.26E-04
15	GO:0003938: IMP dehydrogenase activity	2.65E-04
16	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	4.38E-04
17	GO:0070330: aromatase activity	4.38E-04
18	GO:0008810: cellulase activity	5.51E-04
19	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	6.29E-04
20	GO:0003878: ATP citrate synthase activity	6.29E-04
21	GO:0052793: pectin acetylesterase activity	8.35E-04
22	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	8.35E-04
23	GO:0016829: lyase activity	9.65E-04
24	GO:0051015: actin filament binding	1.04E-03
25	GO:0004623: phospholipase A2 activity	1.05E-03
26	GO:0018685: alkane 1-monooxygenase activity	1.05E-03
27	GO:0008725: DNA-3-methyladenine glycosylase activity	1.05E-03
28	GO:0004040: amidase activity	1.05E-03
29	GO:0005200: structural constituent of cytoskeleton	1.17E-03
30	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.29E-03
31	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.29E-03
32	GO:0008289: lipid binding	1.45E-03
33	GO:0004747: ribokinase activity	1.54E-03
34	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.09E-03
35	GO:0008865: fructokinase activity	2.09E-03
36	GO:0016788: hydrolase activity, acting on ester bonds	2.31E-03
37	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	2.70E-03
38	GO:0004568: chitinase activity	3.36E-03
39	GO:0015020: glucuronosyltransferase activity	3.36E-03
40	GO:0047372: acylglycerol lipase activity	3.71E-03
41	GO:0008378: galactosyltransferase activity	4.06E-03
42	GO:0045735: nutrient reservoir activity	4.34E-03
43	GO:0005262: calcium channel activity	4.43E-03
44	GO:0004565: beta-galactosidase activity	4.43E-03
45	GO:0010329: auxin efflux transmembrane transporter activity	4.43E-03
46	GO:0003924: GTPase activity	4.85E-03
47	GO:0016746: transferase activity, transferring acyl groups	5.37E-03
48	GO:0016760: cellulose synthase (UDP-forming) activity	7.79E-03
49	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.39E-03
50	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.15E-02
51	GO:0016759: cellulose synthase activity	1.29E-02
52	GO:0016791: phosphatase activity	1.29E-02
53	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.35E-02
54	GO:0015250: water channel activity	1.46E-02
55	GO:0008375: acetylglucosaminyltransferase activity	1.58E-02
56	GO:0030247: polysaccharide binding	1.64E-02
57	GO:0005516: calmodulin binding	1.69E-02
58	GO:0005525: GTP binding	1.89E-02
59	GO:0030145: manganese ion binding	1.96E-02
60	GO:0004871: signal transducer activity	2.18E-02
61	GO:0015293: symporter activity	2.72E-02
62	GO:0051287: NAD binding	2.87E-02
63	GO:0016298: lipase activity	3.17E-02
64	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.57E-02
65	GO:0030599: pectinesterase activity	3.81E-02
66	GO:0016758: transferase activity, transferring hexosyl groups	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0005576: extracellular region	4.68E-10
2	GO:0048046: apoplast	2.77E-07
3	GO:0005618: cell wall	3.39E-06
4	GO:0009505: plant-type cell wall	1.53E-05
5	GO:0005886: plasma membrane	2.05E-05
6	GO:0031225: anchored component of membrane	1.86E-04
7	GO:0005875: microtubule associated complex	3.44E-04
8	GO:0009897: external side of plasma membrane	4.38E-04
9	GO:0009331: glycerol-3-phosphate dehydrogenase complex	6.29E-04
10	GO:0015630: microtubule cytoskeleton	6.29E-04
11	GO:0032432: actin filament bundle	6.29E-04
12	GO:0009346: citrate lyase complex	6.29E-04
13	GO:0045298: tubulin complex	2.70E-03
14	GO:0005884: actin filament	3.71E-03
15	GO:0016020: membrane	4.68E-03
16	GO:0031410: cytoplasmic vesicle	7.34E-03
17	GO:0015629: actin cytoskeleton	7.79E-03
18	GO:0046658: anchored component of plasma membrane	1.19E-02
19	GO:0005874: microtubule	1.68E-02
20	GO:0009707: chloroplast outer membrane	1.77E-02
21	GO:0000151: ubiquitin ligase complex	1.77E-02
22	GO:0009535: chloroplast thylakoid membrane	2.06E-02
23	GO:0031977: thylakoid lumen	2.36E-02
24	GO:0005856: cytoskeleton	2.72E-02
25	GO:0005887: integral component of plasma membrane	3.48E-02
26	GO:0005834: heterotrimeric G-protein complex	3.65E-02
27	GO:0009570: chloroplast stroma	3.72E-02
28	GO:0009543: chloroplast thylakoid lumen	4.67E-02