Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G58420

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0044843: cell cycle G1/S phase transition0.00E+00
2GO:0006412: translation1.95E-131
3GO:0042254: ribosome biogenesis7.79E-42
4GO:0000027: ribosomal large subunit assembly3.34E-11
5GO:0009955: adaxial/abaxial pattern specification4.50E-07
6GO:0009967: positive regulation of signal transduction9.42E-07
7GO:0002181: cytoplasmic translation3.53E-06
8GO:0000028: ribosomal small subunit assembly9.31E-05
9GO:0009735: response to cytokinin9.88E-05
10GO:0006407: rRNA export from nucleus1.37E-04
11GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.37E-04
12GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.37E-04
13GO:0048569: post-embryonic animal organ development3.16E-04
14GO:0008283: cell proliferation4.03E-04
15GO:0009965: leaf morphogenesis4.68E-04
16GO:0010476: gibberellin mediated signaling pathway5.20E-04
17GO:0042256: mature ribosome assembly5.20E-04
18GO:0090506: axillary shoot meristem initiation5.20E-04
19GO:0071215: cellular response to abscisic acid stimulus7.07E-04
20GO:0070301: cellular response to hydrogen peroxide7.44E-04
21GO:0006241: CTP biosynthetic process7.44E-04
22GO:0006165: nucleoside diphosphate phosphorylation7.44E-04
23GO:0006228: UTP biosynthetic process7.44E-04
24GO:2000032: regulation of secondary shoot formation9.85E-04
25GO:0042274: ribosomal small subunit biogenesis9.85E-04
26GO:0006183: GTP biosynthetic process9.85E-04
27GO:0009409: response to cold1.03E-03
28GO:0071493: cellular response to UV-B1.25E-03
29GO:0000470: maturation of LSU-rRNA1.53E-03
30GO:0016444: somatic cell DNA recombination1.83E-03
31GO:0000911: cytokinesis by cell plate formation1.83E-03
32GO:0001558: regulation of cell growth2.85E-03
33GO:0000387: spliceosomal snRNP assembly3.60E-03
34GO:0009644: response to high light intensity3.82E-03
35GO:0010015: root morphogenesis4.42E-03
36GO:0006913: nucleocytoplasmic transport4.42E-03
37GO:0006364: rRNA processing4.75E-03
38GO:0006820: anion transport4.85E-03
39GO:0006417: regulation of translation5.26E-03
40GO:0006626: protein targeting to mitochondrion5.30E-03
41GO:0010229: inflorescence development5.30E-03
42GO:0010102: lateral root morphogenesis5.30E-03
43GO:0006414: translational elongation5.71E-03
44GO:0030150: protein import into mitochondrial matrix7.22E-03
45GO:0051302: regulation of cell division7.73E-03
46GO:0006334: nucleosome assembly8.26E-03
47GO:0009845: seed germination9.16E-03
48GO:0040007: growth9.35E-03
49GO:0009793: embryo development ending in seed dormancy9.95E-03
50GO:0009749: response to glucose1.29E-02
51GO:0009791: post-embryonic development1.29E-02
52GO:0032502: developmental process1.42E-02
53GO:0010090: trichome morphogenesis1.49E-02
54GO:0010252: auxin homeostasis1.55E-02
55GO:0006811: ion transport2.28E-02
56GO:0000724: double-strand break repair via homologous recombination2.43E-02
57GO:0048367: shoot system development4.29E-02
58GO:0009620: response to fungus4.49E-02
RankGO TermAdjusted P value
1GO:0003735: structural constituent of ribosome3.60E-161
2GO:0003729: mRNA binding1.49E-39
3GO:0019843: rRNA binding6.04E-10
4GO:0005078: MAP-kinase scaffold activity9.42E-07
5GO:0008097: 5S rRNA binding8.27E-06
6GO:0032947: protein complex scaffold5.20E-04
7GO:0070181: small ribosomal subunit rRNA binding5.20E-04
8GO:0004550: nucleoside diphosphate kinase activity7.44E-04
9GO:0008235: metalloexopeptidase activity2.15E-03
10GO:0015288: porin activity2.49E-03
11GO:0008308: voltage-gated anion channel activity2.85E-03
12GO:0015266: protein channel activity5.30E-03
13GO:0003723: RNA binding1.19E-02
14GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.12E-02
15GO:0003746: translation elongation factor activity2.51E-02
16GO:0042393: histone binding2.76E-02
17GO:0004871: signal transducer activity2.83E-02
RankGO TermAdjusted P value
1GO:0043186: P granule0.00E+00
2GO:0022626: cytosolic ribosome1.37E-119
3GO:0022625: cytosolic large ribosomal subunit2.00E-99
4GO:0005840: ribosome4.08E-89
5GO:0022627: cytosolic small ribosomal subunit6.44E-56
6GO:0005737: cytoplasm3.67E-41
7GO:0005730: nucleolus1.24E-38
8GO:0005829: cytosol8.46E-36
9GO:0009506: plasmodesma4.18E-28
10GO:0015934: large ribosomal subunit4.43E-22
11GO:0005774: vacuolar membrane1.14E-18
12GO:0016020: membrane1.87E-17
13GO:0015935: small ribosomal subunit5.31E-13
14GO:0005773: vacuole2.39E-12
15GO:0005618: cell wall3.01E-10
16GO:0005886: plasma membrane3.07E-08
17GO:0009507: chloroplast2.72E-05
18GO:0005742: mitochondrial outer membrane translocase complex1.17E-04
19GO:0030686: 90S preribosome1.37E-04
20GO:0034719: SMN-Sm protein complex5.20E-04
21GO:0005853: eukaryotic translation elongation factor 1 complex5.20E-04
22GO:0005682: U5 snRNP9.85E-04
23GO:0005687: U4 snRNP1.25E-03
24GO:0097526: spliceosomal tri-snRNP complex1.25E-03
25GO:0005689: U12-type spliceosomal complex1.83E-03
26GO:0005622: intracellular1.83E-03
27GO:0071004: U2-type prespliceosome2.49E-03
28GO:0046930: pore complex2.85E-03
29GO:0005763: mitochondrial small ribosomal subunit3.22E-03
30GO:0005685: U1 snRNP3.22E-03
31GO:0071011: precatalytic spliceosome3.60E-03
32GO:0005686: U2 snRNP4.00E-03
33GO:0071013: catalytic step 2 spliceosome4.42E-03
34GO:0019013: viral nucleocapsid5.30E-03
35GO:0005741: mitochondrial outer membrane8.26E-03
36GO:0030529: intracellular ribonucleoprotein complex1.76E-02
37GO:0005681: spliceosomal complex4.19E-02
38GO:0005834: heterotrimeric G-protein complex4.39E-02
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Gene type



Gene DE type