Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G58330

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080114: positive regulation of glycine hydroxymethyltransferase activity0.00E+00
2GO:0045860: positive regulation of protein kinase activity0.00E+00
3GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
4GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
5GO:0009853: photorespiration1.48E-06
6GO:0097054: L-glutamate biosynthetic process2.78E-05
7GO:0006537: glutamate biosynthetic process7.70E-05
8GO:0019676: ammonia assimilation cycle1.07E-04
9GO:0006656: phosphatidylcholine biosynthetic process1.40E-04
10GO:0009854: oxidative photosynthetic carbon pathway2.11E-04
11GO:0071482: cellular response to light stimulus3.32E-04
12GO:0008202: steroid metabolic process4.18E-04
13GO:0009773: photosynthetic electron transport in photosystem I5.09E-04
14GO:0005983: starch catabolic process5.55E-04
15GO:0010017: red or far-red light signaling pathway9.65E-04
16GO:0042631: cellular response to water deprivation1.19E-03
17GO:0009416: response to light stimulus2.18E-03
18GO:0009744: response to sucrose3.04E-03
19GO:0009585: red, far-red light phototransduction3.72E-03
20GO:0018105: peptidyl-serine phosphorylation4.82E-03
21GO:0006470: protein dephosphorylation7.56E-03
22GO:0046777: protein autophosphorylation1.14E-02
23GO:0045454: cell redox homeostasis1.23E-02
24GO:0006869: lipid transport1.32E-02
25GO:0032259: methylation1.39E-02
26GO:0008152: metabolic process1.53E-02
27GO:0035556: intracellular signal transduction2.24E-02
28GO:0055085: transmembrane transport2.55E-02
29GO:0055114: oxidation-reduction process3.77E-02
30GO:0006810: transport4.68E-02
31GO:0005975: carbohydrate metabolic process4.79E-02
32GO:0046686: response to cadmium ion4.88E-02
RankGO TermAdjusted P value
1GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
2GO:0004676: 3-phosphoinositide-dependent protein kinase activity0.00E+00
3GO:0008465: glycerate dehydrogenase activity0.00E+00
4GO:0050281: serine-glyoxylate transaminase activity0.00E+00
5GO:0004760: serine-pyruvate transaminase activity0.00E+00
6GO:0019203: carbohydrate phosphatase activity1.04E-05
7GO:0016041: glutamate synthase (ferredoxin) activity1.04E-05
8GO:0050308: sugar-phosphatase activity1.04E-05
9GO:0019172: glyoxalase III activity2.78E-05
10GO:0000234: phosphoethanolamine N-methyltransferase activity2.78E-05
11GO:0004148: dihydrolipoyl dehydrogenase activity5.03E-05
12GO:0008453: alanine-glyoxylate transaminase activity1.07E-04
13GO:0051538: 3 iron, 4 sulfur cluster binding1.40E-04
14GO:0004462: lactoylglutathione lyase activity1.74E-04
15GO:2001070: starch binding1.74E-04
16GO:0070300: phosphatidic acid binding2.11E-04
17GO:0043022: ribosome binding2.90E-04
18GO:0008142: oxysterol binding3.32E-04
19GO:0008138: protein tyrosine/serine/threonine phosphatase activity3.74E-04
20GO:0008266: poly(U) RNA binding6.53E-04
21GO:0005528: FK506 binding8.05E-04
22GO:0050897: cobalt ion binding2.41E-03
23GO:0003746: translation elongation factor activity2.56E-03
24GO:0016740: transferase activity2.65E-03
25GO:0035091: phosphatidylinositol binding3.20E-03
26GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.37E-03
27GO:0051287: NAD binding3.46E-03
28GO:0005525: GTP binding3.55E-03
29GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.26E-03
30GO:0042626: ATPase activity, coupled to transmembrane movement of substances8.14E-03
31GO:0050660: flavin adenine dinucleotide binding1.03E-02
32GO:0008289: lipid binding1.81E-02
33GO:0030246: carbohydrate binding2.66E-02
34GO:0005507: copper ion binding2.77E-02
35GO:0003824: catalytic activity3.80E-02
36GO:0004672: protein kinase activity4.68E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast9.66E-07
2GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)3.74E-04
3GO:0048046: apoplast3.89E-04
4GO:0005759: mitochondrial matrix4.23E-04
5GO:0009535: chloroplast thylakoid membrane1.39E-03
6GO:0005777: peroxisome2.49E-03
7GO:0005747: mitochondrial respiratory chain complex I4.26E-03
8GO:0009570: chloroplast stroma5.38E-03
9GO:0009543: chloroplast thylakoid lumen5.52E-03
10GO:0005737: cytoplasm9.15E-03
11GO:0009534: chloroplast thylakoid2.46E-02
12GO:0005622: intracellular3.24E-02
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Gene type



Gene DE type