co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G57580

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009991: response to extracellular stimulus	0.00E+00
2	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
3	GO:0036258: multivesicular body assembly	0.00E+00
4	GO:0016236: macroautophagy	0.00E+00
5	GO:0009867: jasmonic acid mediated signaling pathway	1.76E-06
6	GO:0030968: endoplasmic reticulum unfolded protein response	3.35E-05
7	GO:0006468: protein phosphorylation	5.97E-05
8	GO:0048482: plant ovule morphogenesis	6.10E-05
9	GO:0030242: pexophagy	6.10E-05
10	GO:1902265: abscisic acid homeostasis	6.10E-05
11	GO:0080136: priming of cellular response to stress	6.10E-05
12	GO:0031338: regulation of vesicle fusion	6.10E-05
13	GO:0090421: embryonic meristem initiation	6.10E-05
14	GO:0010030: positive regulation of seed germination	1.30E-04
15	GO:2000072: regulation of defense response to fungus, incompatible interaction	1.48E-04
16	GO:0002240: response to molecule of oomycetes origin	1.48E-04
17	GO:0055078: sodium ion homeostasis	1.48E-04
18	GO:0043066: negative regulation of apoptotic process	1.48E-04
19	GO:2000693: positive regulation of seed maturation	1.48E-04
20	GO:0046621: negative regulation of organ growth	2.51E-04
21	GO:2000034: regulation of seed maturation	2.51E-04
22	GO:0007032: endosome organization	2.51E-04
23	GO:0090630: activation of GTPase activity	2.51E-04
24	GO:0042742: defense response to bacterium	3.26E-04
25	GO:0010104: regulation of ethylene-activated signaling pathway	3.65E-04
26	GO:0070676: intralumenal vesicle formation	3.65E-04
27	GO:0009687: abscisic acid metabolic process	4.88E-04
28	GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly	4.88E-04
29	GO:2000038: regulation of stomatal complex development	4.88E-04
30	GO:0045324: late endosome to vacuole transport	4.88E-04
31	GO:0016567: protein ubiquitination	5.64E-04
32	GO:0048317: seed morphogenesis	7.57E-04
33	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	7.57E-04
34	GO:0048527: lateral root development	8.77E-04
35	GO:2000037: regulation of stomatal complex patterning	9.01E-04
36	GO:0043966: histone H3 acetylation	9.01E-04
37	GO:0009723: response to ethylene	9.56E-04
38	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.05E-03
39	GO:0015937: coenzyme A biosynthetic process	1.05E-03
40	GO:0007165: signal transduction	1.19E-03
41	GO:0009819: drought recovery	1.21E-03
42	GO:0032875: regulation of DNA endoreduplication	1.21E-03
43	GO:0055075: potassium ion homeostasis	1.21E-03
44	GO:0009880: embryonic pattern specification	1.38E-03
45	GO:0010120: camalexin biosynthetic process	1.38E-03
46	GO:0001708: cell fate specification	1.55E-03
47	GO:0009821: alkaloid biosynthetic process	1.55E-03
48	GO:0006813: potassium ion transport	1.62E-03
49	GO:0009638: phototropism	1.73E-03
50	GO:0048268: clathrin coat assembly	1.73E-03
51	GO:2000280: regulation of root development	1.73E-03
52	GO:0008202: steroid metabolic process	1.73E-03
53	GO:0010048: vernalization response	1.92E-03
54	GO:0043069: negative regulation of programmed cell death	1.92E-03
55	GO:0009626: plant-type hypersensitive response	2.04E-03
56	GO:0010072: primary shoot apical meristem specification	2.12E-03
57	GO:0072593: reactive oxygen species metabolic process	2.12E-03
58	GO:0006352: DNA-templated transcription, initiation	2.12E-03
59	GO:0009785: blue light signaling pathway	2.52E-03
60	GO:2000028: regulation of photoperiodism, flowering	2.52E-03
61	GO:0010229: inflorescence development	2.52E-03
62	GO:0009887: animal organ morphogenesis	2.74E-03
63	GO:0007033: vacuole organization	2.96E-03
64	GO:0010053: root epidermal cell differentiation	2.96E-03
65	GO:0010187: negative regulation of seed germination	3.42E-03
66	GO:0051260: protein homooligomerization	3.89E-03
67	GO:0031348: negative regulation of defense response	4.15E-03
68	GO:0071215: cellular response to abscisic acid stimulus	4.40E-03
69	GO:0007166: cell surface receptor signaling pathway	4.49E-03
70	GO:0010091: trichome branching	4.65E-03
71	GO:0042631: cellular response to water deprivation	5.19E-03
72	GO:0010154: fruit development	5.46E-03
73	GO:0006814: sodium ion transport	5.74E-03
74	GO:0055072: iron ion homeostasis	6.03E-03
75	GO:0006623: protein targeting to vacuole	6.03E-03
76	GO:0010183: pollen tube guidance	6.03E-03
77	GO:0000302: response to reactive oxygen species	6.32E-03
78	GO:0006891: intra-Golgi vesicle-mediated transport	6.32E-03
79	GO:0009630: gravitropism	6.61E-03
80	GO:0030163: protein catabolic process	6.91E-03
81	GO:0048366: leaf development	7.14E-03
82	GO:0006904: vesicle docking involved in exocytosis	7.52E-03
83	GO:0010200: response to chitin	7.78E-03
84	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	8.48E-03
85	GO:0009816: defense response to bacterium, incompatible interaction	8.48E-03
86	GO:0048573: photoperiodism, flowering	9.14E-03
87	GO:0006886: intracellular protein transport	9.29E-03
88	GO:0009817: defense response to fungus, incompatible interaction	9.82E-03
89	GO:0048481: plant ovule development	9.82E-03
90	GO:0010311: lateral root formation	1.02E-02
91	GO:0006397: mRNA processing	1.16E-02
92	GO:0048364: root development	1.16E-02
93	GO:0045087: innate immune response	1.16E-02
94	GO:0006887: exocytosis	1.31E-02
95	GO:0006897: endocytosis	1.31E-02
96	GO:0042542: response to hydrogen peroxide	1.35E-02
97	GO:0009734: auxin-activated signaling pathway	1.57E-02
98	GO:0009846: pollen germination	1.63E-02
99	GO:0006812: cation transport	1.63E-02
100	GO:0009736: cytokinin-activated signaling pathway	1.71E-02
101	GO:0010224: response to UV-B	1.76E-02
102	GO:0006417: regulation of translation	1.84E-02
103	GO:0009909: regulation of flower development	1.84E-02
104	GO:0009555: pollen development	1.98E-02
105	GO:0009620: response to fungus	2.06E-02
106	GO:0045893: positive regulation of transcription, DNA-templated	2.27E-02
107	GO:0009845: seed germination	2.73E-02
108	GO:0006413: translational initiation	3.09E-02
109	GO:0040008: regulation of growth	3.14E-02
110	GO:0010150: leaf senescence	3.25E-02
111	GO:0050832: defense response to fungus	3.36E-02
112	GO:0006470: protein dephosphorylation	3.57E-02
113	GO:0010468: regulation of gene expression	3.68E-02
114	GO:0008380: RNA splicing	3.68E-02
115	GO:0006970: response to osmotic stress	4.67E-02
116	GO:0007049: cell cycle	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
2	GO:0004674: protein serine/threonine kinase activity	1.20E-05
3	GO:0016301: kinase activity	3.92E-05
4	GO:0070008: serine-type exopeptidase activity	6.10E-05
5	GO:0001102: RNA polymerase II activating transcription factor binding	6.10E-05
6	GO:0004594: pantothenate kinase activity	1.48E-04
7	GO:0043130: ubiquitin binding	1.63E-04
8	GO:0005515: protein binding	1.85E-04
9	GO:0004416: hydroxyacylglutathione hydrolase activity	3.65E-04
10	GO:0010294: abscisic acid glucosyltransferase activity	6.19E-04
11	GO:0017137: Rab GTPase binding	6.19E-04
12	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	6.19E-04
13	GO:0046982: protein heterodimerization activity	7.82E-04
14	GO:0005096: GTPase activator activity	8.02E-04
15	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.04E-03
16	GO:0005524: ATP binding	1.12E-03
17	GO:0015491: cation:cation antiporter activity	1.21E-03
18	GO:0035091: phosphatidylinositol binding	1.31E-03
19	GO:0008142: oxysterol binding	1.38E-03
20	GO:0005545: 1-phosphatidylinositol binding	1.92E-03
21	GO:0004521: endoribonuclease activity	2.32E-03
22	GO:0017025: TBP-class protein binding	2.96E-03
23	GO:0004725: protein tyrosine phosphatase activity	3.18E-03
24	GO:0004707: MAP kinase activity	3.89E-03
25	GO:0019706: protein-cysteine S-palmitoyltransferase activity	3.89E-03
26	GO:0005249: voltage-gated potassium channel activity	5.19E-03
27	GO:0004402: histone acetyltransferase activity	5.19E-03
28	GO:0030276: clathrin binding	5.46E-03
29	GO:0051213: dioxygenase activity	8.16E-03
30	GO:0030247: polysaccharide binding	9.14E-03
31	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	9.47E-03
32	GO:0008236: serine-type peptidase activity	9.47E-03
33	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.16E-02
34	GO:0004842: ubiquitin-protein transferase activity	1.28E-02
35	GO:0008270: zinc ion binding	1.33E-02
36	GO:0004672: protein kinase activity	1.39E-02
37	GO:0045735: nutrient reservoir activity	1.93E-02
38	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.06E-02
39	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.06E-02
40	GO:0016874: ligase activity	2.11E-02
41	GO:0030246: carbohydrate binding	2.66E-02
42	GO:0004252: serine-type endopeptidase activity	2.78E-02
43	GO:0008565: protein transporter activity	2.94E-02
44	GO:0015297: antiporter activity	3.14E-02
45	GO:0008194: UDP-glycosyltransferase activity	3.52E-02
46	GO:0003743: translation initiation factor activity	3.63E-02
47	GO:0008168: methyltransferase activity	4.31E-02

Rank	GO Term	Adjusted P value
1	GO:0045335: phagocytic vesicle	0.00E+00
2	GO:0071561: nucleus-vacuole junction	0.00E+00
3	GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I	6.10E-05
4	GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II	6.10E-05
5	GO:0000124: SAGA complex	1.48E-04
6	GO:0042406: extrinsic component of endoplasmic reticulum membrane	2.51E-04
7	GO:0005634: nucleus	2.57E-04
8	GO:0032585: multivesicular body membrane	3.65E-04
9	GO:0008076: voltage-gated potassium channel complex	3.65E-04
10	GO:0070062: extracellular exosome	3.65E-04
11	GO:0000813: ESCRT I complex	6.19E-04
12	GO:0005771: multivesicular body	7.57E-04
13	GO:0005669: transcription factor TFIID complex	1.21E-03
14	GO:0005886: plasma membrane	1.43E-03
15	GO:0009574: preprophase band	2.52E-03
16	GO:0005795: Golgi stack	2.96E-03
17	GO:0005905: clathrin-coated pit	3.89E-03
18	GO:0030136: clathrin-coated vesicle	4.92E-03
19	GO:0005770: late endosome	5.46E-03
20	GO:0000145: exocyst	6.61E-03
21	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	6.65E-03
22	GO:0005622: intracellular	7.21E-03
23	GO:0019005: SCF ubiquitin ligase complex	9.82E-03
24	GO:0005643: nuclear pore	9.82E-03
25	GO:0000786: nucleosome	1.12E-02
26	GO:0031902: late endosome membrane	1.31E-02
27	GO:0005834: heterotrimeric G-protein complex	2.02E-02
28	GO:0012505: endomembrane system	2.15E-02
29	GO:0005654: nucleoplasm	2.53E-02
30	GO:0009524: phragmoplast	2.68E-02
31	GO:0005829: cytosol	3.34E-02