GO Enrichment Analysis of Co-expressed Genes with
AT5G57440
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005980: glycogen catabolic process | 5.48E-05 |
| 2 | GO:0071258: cellular response to gravity | 1.34E-04 |
| 3 | GO:0016998: cell wall macromolecule catabolic process | 1.74E-04 |
| 4 | GO:0090506: axillary shoot meristem initiation | 2.28E-04 |
| 5 | GO:0010371: regulation of gibberellin biosynthetic process | 3.33E-04 |
| 6 | GO:0009102: biotin biosynthetic process | 3.33E-04 |
| 7 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 4.45E-04 |
| 8 | GO:0008295: spermidine biosynthetic process | 4.45E-04 |
| 9 | GO:0000304: response to singlet oxygen | 5.66E-04 |
| 10 | GO:0045487: gibberellin catabolic process | 5.66E-04 |
| 11 | GO:0010411: xyloglucan metabolic process | 6.07E-04 |
| 12 | GO:0006014: D-ribose metabolic process | 6.92E-04 |
| 13 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 6.92E-04 |
| 14 | GO:0009082: branched-chain amino acid biosynthetic process | 8.25E-04 |
| 15 | GO:0009099: valine biosynthetic process | 8.25E-04 |
| 16 | GO:0010067: procambium histogenesis | 8.25E-04 |
| 17 | GO:2000033: regulation of seed dormancy process | 8.25E-04 |
| 18 | GO:0016051: carbohydrate biosynthetic process | 8.40E-04 |
| 19 | GO:0042546: cell wall biogenesis | 1.11E-03 |
| 20 | GO:0007155: cell adhesion | 1.11E-03 |
| 21 | GO:0009097: isoleucine biosynthetic process | 1.26E-03 |
| 22 | GO:0009657: plastid organization | 1.26E-03 |
| 23 | GO:0071555: cell wall organization | 1.38E-03 |
| 24 | GO:0006754: ATP biosynthetic process | 1.41E-03 |
| 25 | GO:0009098: leucine biosynthetic process | 1.58E-03 |
| 26 | GO:0006949: syncytium formation | 1.75E-03 |
| 27 | GO:0010162: seed dormancy process | 1.75E-03 |
| 28 | GO:0046856: phosphatidylinositol dephosphorylation | 1.93E-03 |
| 29 | GO:0006415: translational termination | 1.93E-03 |
| 30 | GO:0010223: secondary shoot formation | 2.49E-03 |
| 31 | GO:0009266: response to temperature stimulus | 2.49E-03 |
| 32 | GO:0006633: fatty acid biosynthetic process | 3.12E-03 |
| 33 | GO:0007017: microtubule-based process | 3.32E-03 |
| 34 | GO:0031408: oxylipin biosynthetic process | 3.54E-03 |
| 35 | GO:0035428: hexose transmembrane transport | 3.77E-03 |
| 36 | GO:0009294: DNA mediated transformation | 4.00E-03 |
| 37 | GO:0001944: vasculature development | 4.00E-03 |
| 38 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.00E-03 |
| 39 | GO:0010089: xylem development | 4.23E-03 |
| 40 | GO:0019722: calcium-mediated signaling | 4.23E-03 |
| 41 | GO:0016117: carotenoid biosynthetic process | 4.47E-03 |
| 42 | GO:0010087: phloem or xylem histogenesis | 4.71E-03 |
| 43 | GO:0000226: microtubule cytoskeleton organization | 4.71E-03 |
| 44 | GO:0010182: sugar mediated signaling pathway | 4.96E-03 |
| 45 | GO:0046323: glucose import | 4.96E-03 |
| 46 | GO:0019252: starch biosynthetic process | 5.48E-03 |
| 47 | GO:0009828: plant-type cell wall loosening | 6.55E-03 |
| 48 | GO:0016125: sterol metabolic process | 6.55E-03 |
| 49 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 6.76E-03 |
| 50 | GO:0007267: cell-cell signaling | 6.83E-03 |
| 51 | GO:0016126: sterol biosynthetic process | 7.40E-03 |
| 52 | GO:0015995: chlorophyll biosynthetic process | 8.29E-03 |
| 53 | GO:0009817: defense response to fungus, incompatible interaction | 8.91E-03 |
| 54 | GO:0000160: phosphorelay signal transduction system | 9.22E-03 |
| 55 | GO:0005975: carbohydrate metabolic process | 1.21E-02 |
| 56 | GO:0010114: response to red light | 1.26E-02 |
| 57 | GO:0009664: plant-type cell wall organization | 1.48E-02 |
| 58 | GO:0009736: cytokinin-activated signaling pathway | 1.55E-02 |
| 59 | GO:0043086: negative regulation of catalytic activity | 1.75E-02 |
| 60 | GO:0009624: response to nematode | 1.99E-02 |
| 61 | GO:0006396: RNA processing | 2.04E-02 |
| 62 | GO:0009739: response to gibberellin | 3.19E-02 |
| 63 | GO:0009617: response to bacterium | 3.34E-02 |
| 64 | GO:0009826: unidimensional cell growth | 3.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 2 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 3 | GO:0004496: mevalonate kinase activity | 0.00E+00 |
| 4 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 5 | GO:0004645: phosphorylase activity | 5.48E-05 |
| 6 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 5.48E-05 |
| 7 | GO:0008252: nucleotidase activity | 5.48E-05 |
| 8 | GO:0008184: glycogen phosphorylase activity | 5.48E-05 |
| 9 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 5.48E-05 |
| 10 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.34E-04 |
| 11 | GO:0004766: spermidine synthase activity | 1.34E-04 |
| 12 | GO:0016149: translation release factor activity, codon specific | 3.33E-04 |
| 13 | GO:0052656: L-isoleucine transaminase activity | 3.33E-04 |
| 14 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 3.33E-04 |
| 15 | GO:0052654: L-leucine transaminase activity | 3.33E-04 |
| 16 | GO:0052655: L-valine transaminase activity | 3.33E-04 |
| 17 | GO:0001872: (1->3)-beta-D-glucan binding | 3.33E-04 |
| 18 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 3.33E-04 |
| 19 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.60E-04 |
| 20 | GO:0004084: branched-chain-amino-acid transaminase activity | 4.45E-04 |
| 21 | GO:0052793: pectin acetylesterase activity | 4.45E-04 |
| 22 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 6.07E-04 |
| 23 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 6.92E-04 |
| 24 | GO:0080030: methyl indole-3-acetate esterase activity | 6.92E-04 |
| 25 | GO:0051753: mannan synthase activity | 8.25E-04 |
| 26 | GO:0004747: ribokinase activity | 8.25E-04 |
| 27 | GO:0008865: fructokinase activity | 1.11E-03 |
| 28 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.41E-03 |
| 29 | GO:0003747: translation release factor activity | 1.41E-03 |
| 30 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.41E-03 |
| 31 | GO:0015020: glucuronosyltransferase activity | 1.75E-03 |
| 32 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 2.11E-03 |
| 33 | GO:0004565: beta-galactosidase activity | 2.30E-03 |
| 34 | GO:0033612: receptor serine/threonine kinase binding | 3.54E-03 |
| 35 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.14E-03 |
| 36 | GO:0005102: receptor binding | 4.47E-03 |
| 37 | GO:0005355: glucose transmembrane transporter activity | 5.22E-03 |
| 38 | GO:0019901: protein kinase binding | 5.48E-03 |
| 39 | GO:0000156: phosphorelay response regulator activity | 6.27E-03 |
| 40 | GO:0005200: structural constituent of cytoskeleton | 6.83E-03 |
| 41 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 6.83E-03 |
| 42 | GO:0008375: acetylglucosaminyltransferase activity | 7.99E-03 |
| 43 | GO:0030247: polysaccharide binding | 8.29E-03 |
| 44 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 8.60E-03 |
| 45 | GO:0003993: acid phosphatase activity | 1.09E-02 |
| 46 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.15E-02 |
| 47 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.33E-02 |
| 48 | GO:0015171: amino acid transmembrane transporter activity | 1.67E-02 |
| 49 | GO:0016787: hydrolase activity | 1.87E-02 |
| 50 | GO:0030599: pectinesterase activity | 1.91E-02 |
| 51 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.38E-02 |
| 52 | GO:0030170: pyridoxal phosphate binding | 2.52E-02 |
| 53 | GO:0015144: carbohydrate transmembrane transporter activity | 2.66E-02 |
| 54 | GO:0046910: pectinesterase inhibitor activity | 2.80E-02 |
| 55 | GO:0005351: sugar:proton symporter activity | 2.89E-02 |
| 56 | GO:0016757: transferase activity, transferring glycosyl groups | 3.34E-02 |
| 57 | GO:0042802: identical protein binding | 3.49E-02 |
| 58 | GO:0003824: catalytic activity | 3.82E-02 |
| 59 | GO:0016788: hydrolase activity, acting on ester bonds | 4.07E-02 |
| 60 | GO:0004497: monooxygenase activity | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005618: cell wall | 2.92E-06 |
| 2 | GO:0048046: apoplast | 1.87E-05 |
| 3 | GO:0009570: chloroplast stroma | 5.20E-04 |
| 4 | GO:0045298: tubulin complex | 1.41E-03 |
| 5 | GO:0005578: proteinaceous extracellular matrix | 2.30E-03 |
| 6 | GO:0043234: protein complex | 2.90E-03 |
| 7 | GO:0046658: anchored component of plasma membrane | 4.52E-03 |
| 8 | GO:0031969: chloroplast membrane | 6.54E-03 |
| 9 | GO:0009507: chloroplast | 7.63E-03 |
| 10 | GO:0009506: plasmodesma | 7.65E-03 |
| 11 | GO:0009505: plant-type cell wall | 9.48E-03 |
| 12 | GO:0000139: Golgi membrane | 1.05E-02 |
| 13 | GO:0009941: chloroplast envelope | 1.44E-02 |
| 14 | GO:0016020: membrane | 1.95E-02 |
| 15 | GO:0009534: chloroplast thylakoid | 2.08E-02 |
| 16 | GO:0005576: extracellular region | 2.15E-02 |
| 17 | GO:0031225: anchored component of membrane | 2.68E-02 |
| 18 | GO:0005802: trans-Golgi network | 2.76E-02 |
| 19 | GO:0005768: endosome | 3.13E-02 |
| 20 | GO:0005886: plasma membrane | 3.18E-02 |
| 21 | GO:0005615: extracellular space | 3.19E-02 |
| 22 | GO:0005794: Golgi apparatus | 3.83E-02 |
| 23 | GO:0009536: plastid | 4.26E-02 |
| 24 | GO:0005874: microtubule | 4.56E-02 |