co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G56260

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
2	GO:0051245: negative regulation of cellular defense response	0.00E+00
3	GO:0006468: protein phosphorylation	8.53E-06
4	GO:0043069: negative regulation of programmed cell death	1.18E-05
5	GO:0048194: Golgi vesicle budding	1.73E-05
6	GO:0006612: protein targeting to membrane	1.73E-05
7	GO:0009816: defense response to bacterium, incompatible interaction	2.33E-05
8	GO:0006952: defense response	3.13E-05
9	GO:0060548: negative regulation of cell death	3.17E-05
10	GO:0010363: regulation of plant-type hypersensitive response	3.17E-05
11	GO:0010200: response to chitin	5.32E-05
12	GO:0009814: defense response, incompatible interaction	7.81E-05
13	GO:0010044: response to aluminum ion	1.37E-04
14	GO:0061025: membrane fusion	1.59E-04
15	GO:0006805: xenobiotic metabolic process	2.09E-04
16	GO:0009609: response to symbiotic bacterium	2.09E-04
17	GO:0006643: membrane lipid metabolic process	2.09E-04
18	GO:0006680: glucosylceramide catabolic process	2.09E-04
19	GO:0060862: negative regulation of floral organ abscission	2.09E-04
20	GO:0043562: cellular response to nitrogen levels	2.19E-04
21	GO:0009626: plant-type hypersensitive response	2.29E-04
22	GO:0009620: response to fungus	2.41E-04
23	GO:0080185: effector dependent induction by symbiont of host immune response	4.66E-04
24	GO:0006212: uracil catabolic process	4.66E-04
25	GO:0031349: positive regulation of defense response	4.66E-04
26	GO:0019483: beta-alanine biosynthetic process	4.66E-04
27	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.66E-04
28	GO:0010541: acropetal auxin transport	4.66E-04
29	GO:0008535: respiratory chain complex IV assembly	4.66E-04
30	GO:0002221: pattern recognition receptor signaling pathway	4.66E-04
31	GO:0015914: phospholipid transport	4.66E-04
32	GO:2000072: regulation of defense response to fungus, incompatible interaction	4.66E-04
33	GO:0042742: defense response to bacterium	4.97E-04
34	GO:0050832: defense response to fungus	6.01E-04
35	GO:0010167: response to nitrate	7.02E-04
36	GO:0006517: protein deglycosylation	7.59E-04
37	GO:0055074: calcium ion homeostasis	7.59E-04
38	GO:1900140: regulation of seedling development	7.59E-04
39	GO:0061158: 3'-UTR-mediated mRNA destabilization	7.59E-04
40	GO:0051176: positive regulation of sulfur metabolic process	7.59E-04
41	GO:0072661: protein targeting to plasma membrane	7.59E-04
42	GO:0006887: exocytosis	7.61E-04
43	GO:0000162: tryptophan biosynthetic process	7.82E-04
44	GO:0007166: cell surface receptor signaling pathway	8.09E-04
45	GO:0051707: response to other organism	8.42E-04
46	GO:0009863: salicylic acid mediated signaling pathway	8.63E-04
47	GO:0048278: vesicle docking	1.04E-03
48	GO:0070301: cellular response to hydrogen peroxide	1.08E-03
49	GO:0043207: response to external biotic stimulus	1.08E-03
50	GO:0009399: nitrogen fixation	1.08E-03
51	GO:0010148: transpiration	1.08E-03
52	GO:0002679: respiratory burst involved in defense response	1.08E-03
53	GO:0001676: long-chain fatty acid metabolic process	1.08E-03
54	GO:0000187: activation of MAPK activity	1.08E-03
55	GO:0031348: negative regulation of defense response	1.13E-03
56	GO:0048830: adventitious root development	1.44E-03
57	GO:0010508: positive regulation of autophagy	1.44E-03
58	GO:2000038: regulation of stomatal complex development	1.44E-03
59	GO:0080142: regulation of salicylic acid biosynthetic process	1.44E-03
60	GO:0006542: glutamine biosynthetic process	1.44E-03
61	GO:0042391: regulation of membrane potential	1.56E-03
62	GO:0046283: anthocyanin-containing compound metabolic process	1.83E-03
63	GO:0031365: N-terminal protein amino acid modification	1.83E-03
64	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.85E-03
65	GO:0006979: response to oxidative stress	1.85E-03
66	GO:0006623: protein targeting to vacuole	1.94E-03
67	GO:1900425: negative regulation of defense response to bacterium	2.26E-03
68	GO:0009759: indole glucosinolate biosynthetic process	2.26E-03
69	GO:0010942: positive regulation of cell death	2.26E-03
70	GO:0006751: glutathione catabolic process	2.26E-03
71	GO:0006886: intracellular protein transport	2.43E-03
72	GO:2000037: regulation of stomatal complex patterning	2.71E-03
73	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.71E-03
74	GO:0000911: cytokinesis by cell plate formation	2.71E-03
75	GO:0009612: response to mechanical stimulus	2.71E-03
76	GO:0009610: response to symbiotic fungus	3.20E-03
77	GO:0046470: phosphatidylcholine metabolic process	3.20E-03
78	GO:0043090: amino acid import	3.20E-03
79	GO:0070370: cellular heat acclimation	3.20E-03
80	GO:0042128: nitrate assimilation	3.32E-03
81	GO:0006906: vesicle fusion	3.32E-03
82	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.71E-03
83	GO:0009819: drought recovery	3.71E-03
84	GO:0030162: regulation of proteolysis	3.71E-03
85	GO:0006491: N-glycan processing	3.71E-03
86	GO:1900150: regulation of defense response to fungus	3.71E-03
87	GO:0009817: defense response to fungus, incompatible interaction	3.88E-03
88	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	4.24E-03
89	GO:0010120: camalexin biosynthetic process	4.24E-03
90	GO:0010204: defense response signaling pathway, resistance gene-independent	4.24E-03
91	GO:0009808: lignin metabolic process	4.24E-03
92	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.38E-03
93	GO:0010119: regulation of stomatal movement	4.48E-03
94	GO:0009821: alkaloid biosynthetic process	4.80E-03
95	GO:0051865: protein autoubiquitination	4.80E-03
96	GO:0009867: jasmonic acid mediated signaling pathway	4.91E-03
97	GO:0048268: clathrin coat assembly	5.38E-03
98	GO:0006995: cellular response to nitrogen starvation	5.99E-03
99	GO:0006032: chitin catabolic process	5.99E-03
100	GO:0009641: shade avoidance	5.99E-03
101	GO:0009684: indoleacetic acid biosynthetic process	6.62E-03
102	GO:0009682: induced systemic resistance	6.62E-03
103	GO:0052544: defense response by callose deposition in cell wall	6.62E-03
104	GO:0030148: sphingolipid biosynthetic process	6.62E-03
105	GO:0009636: response to toxic substance	7.11E-03
106	GO:0006970: response to osmotic stress	7.26E-03
107	GO:0000266: mitochondrial fission	7.28E-03
108	GO:0015706: nitrate transport	7.28E-03
109	GO:0071365: cellular response to auxin stimulus	7.28E-03
110	GO:0006807: nitrogen compound metabolic process	7.96E-03
111	GO:0010229: inflorescence development	7.96E-03
112	GO:0034605: cellular response to heat	8.66E-03
113	GO:0016192: vesicle-mediated transport	9.27E-03
114	GO:0042343: indole glucosinolate metabolic process	9.37E-03
115	GO:0070588: calcium ion transmembrane transport	9.37E-03
116	GO:0046777: protein autophosphorylation	9.47E-03
117	GO:0080147: root hair cell development	1.09E-02
118	GO:0006874: cellular calcium ion homeostasis	1.17E-02
119	GO:0098542: defense response to other organism	1.25E-02
120	GO:0016998: cell wall macromolecule catabolic process	1.25E-02
121	GO:0016226: iron-sulfur cluster assembly	1.33E-02
122	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.33E-02
123	GO:0016042: lipid catabolic process	1.38E-02
124	GO:0010227: floral organ abscission	1.41E-02
125	GO:0006012: galactose metabolic process	1.41E-02
126	GO:0010091: trichome branching	1.50E-02
127	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.59E-02
128	GO:0042147: retrograde transport, endosome to Golgi	1.59E-02
129	GO:0006508: proteolysis	1.63E-02
130	GO:0009845: seed germination	1.65E-02
131	GO:0000413: protein peptidyl-prolyl isomerization	1.68E-02
132	GO:0008360: regulation of cell shape	1.77E-02
133	GO:0010197: polar nucleus fusion	1.77E-02
134	GO:0046323: glucose import	1.77E-02
135	GO:0048544: recognition of pollen	1.86E-02
136	GO:0010183: pollen tube guidance	1.96E-02
137	GO:0040008: regulation of growth	2.01E-02
138	GO:0010193: response to ozone	2.06E-02
139	GO:0010150: leaf senescence	2.11E-02
140	GO:0016032: viral process	2.15E-02
141	GO:0030163: protein catabolic process	2.25E-02
142	GO:0006470: protein dephosphorylation	2.42E-02
143	GO:0006904: vesicle docking involved in exocytosis	2.46E-02
144	GO:0009617: response to bacterium	2.52E-02
145	GO:0051607: defense response to virus	2.57E-02
146	GO:0009615: response to virus	2.67E-02
147	GO:0009738: abscisic acid-activated signaling pathway	2.82E-02
148	GO:0009627: systemic acquired resistance	2.89E-02
149	GO:0015031: protein transport	3.14E-02
150	GO:0008219: cell death	3.23E-02
151	GO:0010311: lateral root formation	3.34E-02
152	GO:0006499: N-terminal protein myristoylation	3.46E-02
153	GO:0048527: lateral root development	3.58E-02
154	GO:0006865: amino acid transport	3.70E-02
155	GO:0009723: response to ethylene	3.78E-02
156	GO:0045087: innate immune response	3.82E-02
157	GO:0006099: tricarboxylic acid cycle	3.94E-02
158	GO:0006457: protein folding	4.04E-02
159	GO:0006897: endocytosis	4.32E-02
160	GO:0006631: fatty acid metabolic process	4.32E-02
161	GO:0044550: secondary metabolite biosynthetic process	4.39E-02
162	GO:0010114: response to red light	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
2	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
3	GO:0015370: solute:sodium symporter activity	0.00E+00
4	GO:0003837: beta-ureidopropionase activity	0.00E+00
5	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
6	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
7	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
8	GO:0004012: phospholipid-translocating ATPase activity	7.07E-09
9	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.32E-07
10	GO:0016301: kinase activity	3.91E-05
11	GO:0005524: ATP binding	5.27E-05
12	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.76E-04
13	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.09E-04
14	GO:1901149: salicylic acid binding	2.09E-04
15	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.09E-04
16	GO:0004348: glucosylceramidase activity	2.09E-04
17	GO:0015168: glycerol transmembrane transporter activity	2.09E-04
18	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.09E-04
19	GO:0004713: protein tyrosine kinase activity	3.71E-04
20	GO:0045140: inositol phosphoceramide synthase activity	4.66E-04
21	GO:0047209: coniferyl-alcohol glucosyltransferase activity	4.66E-04
22	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.94E-04
23	GO:0030552: cAMP binding	7.02E-04
24	GO:0030553: cGMP binding	7.02E-04
25	GO:0004190: aspartic-type endopeptidase activity	7.02E-04
26	GO:0003840: gamma-glutamyltransferase activity	7.59E-04
27	GO:0036374: glutathione hydrolase activity	7.59E-04
28	GO:0005484: SNAP receptor activity	8.42E-04
29	GO:0005216: ion channel activity	9.49E-04
30	GO:0005516: calmodulin binding	1.01E-03
31	GO:0033612: receptor serine/threonine kinase binding	1.04E-03
32	GO:0005354: galactose transmembrane transporter activity	1.08E-03
33	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.08E-03
34	GO:0004672: protein kinase activity	1.16E-03
35	GO:0000287: magnesium ion binding	1.24E-03
36	GO:0043495: protein anchor	1.44E-03
37	GO:0015204: urea transmembrane transporter activity	1.44E-03
38	GO:0005509: calcium ion binding	1.55E-03
39	GO:0030551: cyclic nucleotide binding	1.56E-03
40	GO:0005249: voltage-gated potassium channel activity	1.56E-03
41	GO:0015145: monosaccharide transmembrane transporter activity	1.83E-03
42	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.83E-03
43	GO:0004356: glutamate-ammonia ligase activity	1.83E-03
44	GO:0102391: decanoate--CoA ligase activity	2.71E-03
45	GO:0004656: procollagen-proline 4-dioxygenase activity	2.71E-03
46	GO:0008235: metalloexopeptidase activity	3.20E-03
47	GO:0004467: long-chain fatty acid-CoA ligase activity	3.20E-03
48	GO:0004034: aldose 1-epimerase activity	3.71E-03
49	GO:0004708: MAP kinase kinase activity	3.71E-03
50	GO:0003843: 1,3-beta-D-glucan synthase activity	4.24E-03
51	GO:0004630: phospholipase D activity	4.24E-03
52	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.24E-03
53	GO:0071949: FAD binding	4.80E-03
54	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.91E-03
55	GO:0000149: SNARE binding	5.36E-03
56	GO:0015112: nitrate transmembrane transporter activity	5.38E-03
57	GO:0016844: strictosidine synthase activity	5.38E-03
58	GO:0004568: chitinase activity	5.99E-03
59	GO:0005545: 1-phosphatidylinositol binding	5.99E-03
60	GO:0008047: enzyme activator activity	5.99E-03
61	GO:0004674: protein serine/threonine kinase activity	6.02E-03
62	GO:0005543: phospholipid binding	6.62E-03
63	GO:0004177: aminopeptidase activity	6.62E-03
64	GO:0015293: symporter activity	7.11E-03
65	GO:0016757: transferase activity, transferring glycosyl groups	7.19E-03
66	GO:0005262: calcium channel activity	7.96E-03
67	GO:0005388: calcium-transporting ATPase activity	7.96E-03
68	GO:0031072: heat shock protein binding	7.96E-03
69	GO:0016298: lipase activity	8.83E-03
70	GO:0003712: transcription cofactor activity	9.37E-03
71	GO:0005217: intracellular ligand-gated ion channel activity	9.37E-03
72	GO:0004970: ionotropic glutamate receptor activity	9.37E-03
73	GO:0031625: ubiquitin protein ligase binding	9.46E-03
74	GO:0031418: L-ascorbic acid binding	1.09E-02
75	GO:0003954: NADH dehydrogenase activity	1.09E-02
76	GO:0030246: carbohydrate binding	1.19E-02
77	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.21E-02
78	GO:0051082: unfolded protein binding	1.22E-02
79	GO:0005515: protein binding	1.43E-02
80	GO:0003727: single-stranded RNA binding	1.50E-02
81	GO:0030276: clathrin binding	1.77E-02
82	GO:0001085: RNA polymerase II transcription factor binding	1.77E-02
83	GO:0016853: isomerase activity	1.86E-02
84	GO:0010181: FMN binding	1.86E-02
85	GO:0005355: glucose transmembrane transporter activity	1.86E-02
86	GO:0005506: iron ion binding	2.15E-02
87	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.46E-02
88	GO:0016597: amino acid binding	2.57E-02
89	GO:0051213: dioxygenase activity	2.67E-02
90	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.89E-02
91	GO:0004683: calmodulin-dependent protein kinase activity	3.00E-02
92	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.00E-02
93	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.58E-02
94	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.07E-02
95	GO:0061630: ubiquitin protein ligase activity	4.25E-02
96	GO:0052689: carboxylic ester hydrolase activity	4.46E-02
97	GO:0019825: oxygen binding	4.54E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	2.86E-15
2	GO:0016021: integral component of membrane	1.33E-09
3	GO:0031902: late endosome membrane	4.42E-06
4	GO:0005802: trans-Golgi network	5.65E-05
5	GO:0009504: cell plate	1.75E-04
6	GO:0045252: oxoglutarate dehydrogenase complex	2.09E-04
7	GO:0005887: integral component of plasma membrane	2.54E-04
8	GO:0005789: endoplasmic reticulum membrane	3.64E-04
9	GO:0017119: Golgi transport complex	3.71E-04
10	GO:0031304: intrinsic component of mitochondrial inner membrane	4.66E-04
11	GO:0005901: caveola	4.66E-04
12	GO:0070062: extracellular exosome	1.08E-03
13	GO:0009506: plasmodesma	2.15E-03
14	GO:0030904: retromer complex	2.26E-03
15	GO:0005794: Golgi apparatus	2.40E-03
16	GO:0019005: SCF ubiquitin ligase complex	3.88E-03
17	GO:0000148: 1,3-beta-D-glucan synthase complex	4.24E-03
18	GO:0030665: clathrin-coated vesicle membrane	5.38E-03
19	GO:0031201: SNARE complex	5.84E-03
20	GO:0005773: vacuole	7.17E-03
21	GO:0000139: Golgi membrane	1.10E-02
22	GO:0005905: clathrin-coated pit	1.25E-02
23	GO:0030136: clathrin-coated vesicle	1.59E-02
24	GO:0005768: endosome	1.88E-02
25	GO:0019898: extrinsic component of membrane	1.96E-02
26	GO:0000145: exocyst	2.15E-02
27	GO:0030529: intracellular ribonucleoprotein complex	2.67E-02
28	GO:0005788: endoplasmic reticulum lumen	2.78E-02
29	GO:0005667: transcription factor complex	2.89E-02
30	GO:0005783: endoplasmic reticulum	3.23E-02
31	GO:0016020: membrane	3.65E-02
32	GO:0090406: pollen tube	4.57E-02