GO Enrichment Analysis of Co-expressed Genes with
AT5G55480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 2 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 3 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 4 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
| 5 | GO:0008064: regulation of actin polymerization or depolymerization | 0.00E+00 |
| 6 | GO:0051493: regulation of cytoskeleton organization | 0.00E+00 |
| 7 | GO:0043007: maintenance of rDNA | 5.64E-05 |
| 8 | GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway | 5.64E-05 |
| 9 | GO:0060627: regulation of vesicle-mediated transport | 5.64E-05 |
| 10 | GO:0045717: negative regulation of fatty acid biosynthetic process | 1.37E-04 |
| 11 | GO:0010198: synergid death | 1.37E-04 |
| 12 | GO:0006424: glutamyl-tRNA aminoacylation | 3.41E-04 |
| 13 | GO:0055070: copper ion homeostasis | 3.41E-04 |
| 14 | GO:0007231: osmosensory signaling pathway | 3.41E-04 |
| 15 | GO:0033500: carbohydrate homeostasis | 4.56E-04 |
| 16 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 4.56E-04 |
| 17 | GO:0015976: carbon utilization | 4.56E-04 |
| 18 | GO:0006085: acetyl-CoA biosynthetic process | 4.56E-04 |
| 19 | GO:0032543: mitochondrial translation | 5.78E-04 |
| 20 | GO:0035434: copper ion transmembrane transport | 5.78E-04 |
| 21 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 7.07E-04 |
| 22 | GO:0010405: arabinogalactan protein metabolic process | 7.07E-04 |
| 23 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 7.07E-04 |
| 24 | GO:0009554: megasporogenesis | 8.44E-04 |
| 25 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 9.55E-04 |
| 26 | GO:0030001: metal ion transport | 9.82E-04 |
| 27 | GO:0098869: cellular oxidant detoxification | 9.85E-04 |
| 28 | GO:0010928: regulation of auxin mediated signaling pathway | 1.13E-03 |
| 29 | GO:0016559: peroxisome fission | 1.13E-03 |
| 30 | GO:0071555: cell wall organization | 1.45E-03 |
| 31 | GO:0006949: syncytium formation | 1.79E-03 |
| 32 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.97E-03 |
| 33 | GO:0006816: calcium ion transport | 1.97E-03 |
| 34 | GO:0050826: response to freezing | 2.36E-03 |
| 35 | GO:0009767: photosynthetic electron transport chain | 2.36E-03 |
| 36 | GO:0010020: chloroplast fission | 2.56E-03 |
| 37 | GO:0070588: calcium ion transmembrane transport | 2.76E-03 |
| 38 | GO:0006833: water transport | 2.97E-03 |
| 39 | GO:0006633: fatty acid biosynthetic process | 3.23E-03 |
| 40 | GO:0007017: microtubule-based process | 3.40E-03 |
| 41 | GO:0019953: sexual reproduction | 3.40E-03 |
| 42 | GO:0016998: cell wall macromolecule catabolic process | 3.63E-03 |
| 43 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 4.58E-03 |
| 44 | GO:0034220: ion transmembrane transport | 4.83E-03 |
| 45 | GO:0008360: regulation of cell shape | 5.09E-03 |
| 46 | GO:0009958: positive gravitropism | 5.09E-03 |
| 47 | GO:0071554: cell wall organization or biogenesis | 5.88E-03 |
| 48 | GO:0007264: small GTPase mediated signal transduction | 6.15E-03 |
| 49 | GO:0009828: plant-type cell wall loosening | 6.71E-03 |
| 50 | GO:0016125: sterol metabolic process | 6.71E-03 |
| 51 | GO:0051607: defense response to virus | 7.29E-03 |
| 52 | GO:0016126: sterol biosynthetic process | 7.59E-03 |
| 53 | GO:0045454: cell redox homeostasis | 8.11E-03 |
| 54 | GO:0010411: xyloglucan metabolic process | 8.50E-03 |
| 55 | GO:0009834: plant-type secondary cell wall biogenesis | 9.78E-03 |
| 56 | GO:0006629: lipid metabolic process | 1.00E-02 |
| 57 | GO:0008152: metabolic process | 1.10E-02 |
| 58 | GO:0006631: fatty acid metabolic process | 1.22E-02 |
| 59 | GO:0051707: response to other organism | 1.29E-02 |
| 60 | GO:0042546: cell wall biogenesis | 1.33E-02 |
| 61 | GO:0009664: plant-type cell wall organization | 1.51E-02 |
| 62 | GO:0042538: hyperosmotic salinity response | 1.51E-02 |
| 63 | GO:0006813: potassium ion transport | 1.59E-02 |
| 64 | GO:0006096: glycolytic process | 1.79E-02 |
| 65 | GO:0042545: cell wall modification | 2.00E-02 |
| 66 | GO:0042744: hydrogen peroxide catabolic process | 2.63E-02 |
| 67 | GO:0007623: circadian rhythm | 3.02E-02 |
| 68 | GO:0045490: pectin catabolic process | 3.02E-02 |
| 69 | GO:0006468: protein phosphorylation | 3.17E-02 |
| 70 | GO:0006470: protein dephosphorylation | 3.32E-02 |
| 71 | GO:0007166: cell surface receptor signaling pathway | 3.32E-02 |
| 72 | GO:0009826: unidimensional cell growth | 4.01E-02 |
| 73 | GO:0006970: response to osmotic stress | 4.34E-02 |
| 74 | GO:0009860: pollen tube growth | 4.34E-02 |
| 75 | GO:0016192: vesicle-mediated transport | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004496: mevalonate kinase activity | 0.00E+00 |
| 2 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 3 | GO:0004560: alpha-L-fucosidase activity | 5.64E-05 |
| 4 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 5.64E-05 |
| 5 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.37E-04 |
| 6 | GO:0019829: cation-transporting ATPase activity | 2.34E-04 |
| 7 | GO:0016531: copper chaperone activity | 2.34E-04 |
| 8 | GO:0001872: (1->3)-beta-D-glucan binding | 3.41E-04 |
| 9 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 3.41E-04 |
| 10 | GO:0003878: ATP citrate synthase activity | 3.41E-04 |
| 11 | GO:0016836: hydro-lyase activity | 4.56E-04 |
| 12 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 7.07E-04 |
| 13 | GO:0102391: decanoate--CoA ligase activity | 8.44E-04 |
| 14 | GO:0051753: mannan synthase activity | 8.44E-04 |
| 15 | GO:0051920: peroxiredoxin activity | 8.44E-04 |
| 16 | GO:0004467: long-chain fatty acid-CoA ligase activity | 9.85E-04 |
| 17 | GO:0052689: carboxylic ester hydrolase activity | 1.04E-03 |
| 18 | GO:0016209: antioxidant activity | 1.13E-03 |
| 19 | GO:0005375: copper ion transmembrane transporter activity | 1.29E-03 |
| 20 | GO:0003924: GTPase activity | 1.48E-03 |
| 21 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.97E-03 |
| 22 | GO:0047372: acylglycerol lipase activity | 1.97E-03 |
| 23 | GO:0004565: beta-galactosidase activity | 2.36E-03 |
| 24 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.36E-03 |
| 25 | GO:0004089: carbonate dehydratase activity | 2.36E-03 |
| 26 | GO:0005262: calcium channel activity | 2.36E-03 |
| 27 | GO:0008324: cation transmembrane transporter activity | 3.40E-03 |
| 28 | GO:0003713: transcription coactivator activity | 5.09E-03 |
| 29 | GO:0004601: peroxidase activity | 5.47E-03 |
| 30 | GO:0016788: hydrolase activity, acting on ester bonds | 5.57E-03 |
| 31 | GO:0005525: GTP binding | 5.73E-03 |
| 32 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 5.88E-03 |
| 33 | GO:0005200: structural constituent of cytoskeleton | 7.00E-03 |
| 34 | GO:0016413: O-acetyltransferase activity | 7.29E-03 |
| 35 | GO:0015250: water channel activity | 7.59E-03 |
| 36 | GO:0030247: polysaccharide binding | 8.50E-03 |
| 37 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 8.50E-03 |
| 38 | GO:0030145: manganese ion binding | 1.01E-02 |
| 39 | GO:0045330: aspartyl esterase activity | 1.71E-02 |
| 40 | GO:0045735: nutrient reservoir activity | 1.79E-02 |
| 41 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.92E-02 |
| 42 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.92E-02 |
| 43 | GO:0030599: pectinesterase activity | 1.96E-02 |
| 44 | GO:0003779: actin binding | 2.00E-02 |
| 45 | GO:0016758: transferase activity, transferring hexosyl groups | 2.35E-02 |
| 46 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.35E-02 |
| 47 | GO:0005524: ATP binding | 2.60E-02 |
| 48 | GO:0005516: calmodulin binding | 2.68E-02 |
| 49 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.87E-02 |
| 50 | GO:0008017: microtubule binding | 3.12E-02 |
| 51 | GO:0008194: UDP-glycosyltransferase activity | 3.27E-02 |
| 52 | GO:0016757: transferase activity, transferring glycosyl groups | 3.49E-02 |
| 53 | GO:0042802: identical protein binding | 3.58E-02 |
| 54 | GO:0061630: ubiquitin protein ligase activity | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070971: endoplasmic reticulum exit site | 0.00E+00 |
| 2 | GO:0031225: anchored component of membrane | 1.22E-06 |
| 3 | GO:0005886: plasma membrane | 1.54E-05 |
| 4 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 5.64E-05 |
| 5 | GO:0009346: citrate lyase complex | 3.41E-04 |
| 6 | GO:0009505: plant-type cell wall | 4.06E-04 |
| 7 | GO:0046658: anchored component of plasma membrane | 5.78E-04 |
| 8 | GO:0005618: cell wall | 7.71E-04 |
| 9 | GO:0009941: chloroplast envelope | 1.08E-03 |
| 10 | GO:0045298: tubulin complex | 1.45E-03 |
| 11 | GO:0009536: plastid | 1.98E-03 |
| 12 | GO:0019898: extrinsic component of membrane | 5.61E-03 |
| 13 | GO:0009570: chloroplast stroma | 7.37E-03 |
| 14 | GO:0009707: chloroplast outer membrane | 9.13E-03 |
| 15 | GO:0000151: ubiquitin ligase complex | 9.13E-03 |
| 16 | GO:0048046: apoplast | 1.03E-02 |
| 17 | GO:0000139: Golgi membrane | 1.10E-02 |
| 18 | GO:0005576: extracellular region | 1.11E-02 |
| 19 | GO:0005887: integral component of plasma membrane | 1.36E-02 |
| 20 | GO:0005794: Golgi apparatus | 1.48E-02 |
| 21 | GO:0009534: chloroplast thylakoid | 2.15E-02 |
| 22 | GO:0009506: plasmodesma | 2.46E-02 |
| 23 | GO:0005802: trans-Golgi network | 2.86E-02 |
| 24 | GO:0005768: endosome | 3.25E-02 |
| 25 | GO:0009507: chloroplast | 3.39E-02 |
| 26 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.40E-02 |
| 27 | GO:0005874: microtubule | 4.68E-02 |
| 28 | GO:0031969: chloroplast membrane | 4.80E-02 |