GO Enrichment Analysis of Co-expressed Genes with
AT5G54860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002376: immune system process | 0.00E+00 |
| 2 | GO:0051553: flavone biosynthetic process | 0.00E+00 |
| 3 | GO:0090480: purine nucleotide-sugar transmembrane transport | 0.00E+00 |
| 4 | GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase | 0.00E+00 |
| 5 | GO:0045792: negative regulation of cell size | 0.00E+00 |
| 6 | GO:0031349: positive regulation of defense response | 1.13E-06 |
| 7 | GO:0006468: protein phosphorylation | 3.25E-06 |
| 8 | GO:0000187: activation of MAPK activity | 9.86E-06 |
| 9 | GO:0009617: response to bacterium | 5.15E-05 |
| 10 | GO:0046470: phosphatidylcholine metabolic process | 8.40E-05 |
| 11 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.08E-04 |
| 12 | GO:0030968: endoplasmic reticulum unfolded protein response | 1.36E-04 |
| 13 | GO:0044376: RNA polymerase II complex import to nucleus | 1.52E-04 |
| 14 | GO:0060862: negative regulation of floral organ abscission | 1.52E-04 |
| 15 | GO:0006422: aspartyl-tRNA aminoacylation | 1.52E-04 |
| 16 | GO:1990022: RNA polymerase III complex localization to nucleus | 1.52E-04 |
| 17 | GO:0009700: indole phytoalexin biosynthetic process | 1.52E-04 |
| 18 | GO:0043687: post-translational protein modification | 1.52E-04 |
| 19 | GO:0006643: membrane lipid metabolic process | 1.52E-04 |
| 20 | GO:0042964: thioredoxin reduction | 1.52E-04 |
| 21 | GO:0006952: defense response | 2.98E-04 |
| 22 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 3.47E-04 |
| 23 | GO:0006954: inflammatory response | 5.68E-04 |
| 24 | GO:0009062: fatty acid catabolic process | 5.68E-04 |
| 25 | GO:0015783: GDP-fucose transport | 5.68E-04 |
| 26 | GO:0006517: protein deglycosylation | 5.68E-04 |
| 27 | GO:0048281: inflorescence morphogenesis | 5.68E-04 |
| 28 | GO:0016998: cell wall macromolecule catabolic process | 6.79E-04 |
| 29 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.43E-04 |
| 30 | GO:0009814: defense response, incompatible interaction | 7.43E-04 |
| 31 | GO:0009625: response to insect | 8.07E-04 |
| 32 | GO:0015696: ammonium transport | 8.13E-04 |
| 33 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 8.13E-04 |
| 34 | GO:0002239: response to oomycetes | 8.13E-04 |
| 35 | GO:0072334: UDP-galactose transmembrane transport | 8.13E-04 |
| 36 | GO:0006516: glycoprotein catabolic process | 8.13E-04 |
| 37 | GO:0033014: tetrapyrrole biosynthetic process | 8.13E-04 |
| 38 | GO:0010200: response to chitin | 9.44E-04 |
| 39 | GO:2000038: regulation of stomatal complex development | 1.08E-03 |
| 40 | GO:0010188: response to microbial phytotoxin | 1.08E-03 |
| 41 | GO:0072488: ammonium transmembrane transport | 1.08E-03 |
| 42 | GO:0010197: polar nucleus fusion | 1.09E-03 |
| 43 | GO:0000302: response to reactive oxygen species | 1.34E-03 |
| 44 | GO:0018279: protein N-linked glycosylation via asparagine | 1.36E-03 |
| 45 | GO:0005513: detection of calcium ion | 1.36E-03 |
| 46 | GO:0045116: protein neddylation | 1.36E-03 |
| 47 | GO:0030163: protein catabolic process | 1.52E-03 |
| 48 | GO:0060918: auxin transport | 1.67E-03 |
| 49 | GO:0047484: regulation of response to osmotic stress | 1.67E-03 |
| 50 | GO:0006014: D-ribose metabolic process | 1.67E-03 |
| 51 | GO:0010942: positive regulation of cell death | 1.67E-03 |
| 52 | GO:0050832: defense response to fungus | 2.00E-03 |
| 53 | GO:2000037: regulation of stomatal complex patterning | 2.01E-03 |
| 54 | GO:0010150: leaf senescence | 2.15E-03 |
| 55 | GO:0010044: response to aluminum ion | 2.36E-03 |
| 56 | GO:0043090: amino acid import | 2.36E-03 |
| 57 | GO:0071446: cellular response to salicylic acid stimulus | 2.36E-03 |
| 58 | GO:0016049: cell growth | 2.37E-03 |
| 59 | GO:0009813: flavonoid biosynthetic process | 2.62E-03 |
| 60 | GO:0006605: protein targeting | 2.73E-03 |
| 61 | GO:0006102: isocitrate metabolic process | 2.73E-03 |
| 62 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.73E-03 |
| 63 | GO:0009819: drought recovery | 2.73E-03 |
| 64 | GO:0009414: response to water deprivation | 2.82E-03 |
| 65 | GO:0042742: defense response to bacterium | 2.94E-03 |
| 66 | GO:0006979: response to oxidative stress | 2.98E-03 |
| 67 | GO:0010120: camalexin biosynthetic process | 3.12E-03 |
| 68 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 3.12E-03 |
| 69 | GO:0019430: removal of superoxide radicals | 3.12E-03 |
| 70 | GO:0006099: tricarboxylic acid cycle | 3.29E-03 |
| 71 | GO:0009735: response to cytokinin | 3.36E-03 |
| 72 | GO:0006783: heme biosynthetic process | 3.53E-03 |
| 73 | GO:0010112: regulation of systemic acquired resistance | 3.53E-03 |
| 74 | GO:0015780: nucleotide-sugar transport | 3.53E-03 |
| 75 | GO:0046685: response to arsenic-containing substance | 3.53E-03 |
| 76 | GO:0006032: chitin catabolic process | 4.40E-03 |
| 77 | GO:0010215: cellulose microfibril organization | 4.40E-03 |
| 78 | GO:0009965: leaf morphogenesis | 4.55E-03 |
| 79 | GO:0052544: defense response by callose deposition in cell wall | 4.86E-03 |
| 80 | GO:0000165: MAPK cascade | 4.90E-03 |
| 81 | GO:0009846: pollen germination | 5.08E-03 |
| 82 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 5.13E-03 |
| 83 | GO:0010229: inflorescence development | 5.83E-03 |
| 84 | GO:0055114: oxidation-reduction process | 6.76E-03 |
| 85 | GO:0000162: tryptophan biosynthetic process | 7.40E-03 |
| 86 | GO:0034976: response to endoplasmic reticulum stress | 7.40E-03 |
| 87 | GO:0009553: embryo sac development | 7.53E-03 |
| 88 | GO:0009751: response to salicylic acid | 7.91E-03 |
| 89 | GO:0080147: root hair cell development | 7.95E-03 |
| 90 | GO:2000377: regulation of reactive oxygen species metabolic process | 7.95E-03 |
| 91 | GO:0000027: ribosomal large subunit assembly | 7.95E-03 |
| 92 | GO:0009651: response to salt stress | 8.07E-03 |
| 93 | GO:0007131: reciprocal meiotic recombination | 9.69E-03 |
| 94 | GO:0010227: floral organ abscission | 1.03E-02 |
| 95 | GO:0009306: protein secretion | 1.09E-02 |
| 96 | GO:0010584: pollen exine formation | 1.09E-02 |
| 97 | GO:0019722: calcium-mediated signaling | 1.09E-02 |
| 98 | GO:0009790: embryo development | 1.14E-02 |
| 99 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.16E-02 |
| 100 | GO:0010051: xylem and phloem pattern formation | 1.22E-02 |
| 101 | GO:0042631: cellular response to water deprivation | 1.22E-02 |
| 102 | GO:0009646: response to absence of light | 1.36E-02 |
| 103 | GO:0019252: starch biosynthetic process | 1.42E-02 |
| 104 | GO:0009851: auxin biosynthetic process | 1.42E-02 |
| 105 | GO:0006623: protein targeting to vacuole | 1.42E-02 |
| 106 | GO:0010183: pollen tube guidance | 1.42E-02 |
| 107 | GO:0006635: fatty acid beta-oxidation | 1.50E-02 |
| 108 | GO:0002229: defense response to oomycetes | 1.50E-02 |
| 109 | GO:0010193: response to ozone | 1.50E-02 |
| 110 | GO:0007166: cell surface receptor signaling pathway | 1.54E-02 |
| 111 | GO:0009630: gravitropism | 1.57E-02 |
| 112 | GO:0010252: auxin homeostasis | 1.71E-02 |
| 113 | GO:0009615: response to virus | 1.94E-02 |
| 114 | GO:0009816: defense response to bacterium, incompatible interaction | 2.02E-02 |
| 115 | GO:0009627: systemic acquired resistance | 2.10E-02 |
| 116 | GO:0046686: response to cadmium ion | 2.18E-02 |
| 117 | GO:0015995: chlorophyll biosynthetic process | 2.18E-02 |
| 118 | GO:0006457: protein folding | 2.31E-02 |
| 119 | GO:0009631: cold acclimation | 2.60E-02 |
| 120 | GO:0048527: lateral root development | 2.60E-02 |
| 121 | GO:0010119: regulation of stomatal movement | 2.60E-02 |
| 122 | GO:0006865: amino acid transport | 2.69E-02 |
| 123 | GO:0016051: carbohydrate biosynthetic process | 2.78E-02 |
| 124 | GO:0045454: cell redox homeostasis | 3.10E-02 |
| 125 | GO:0051707: response to other organism | 3.32E-02 |
| 126 | GO:0009737: response to abscisic acid | 3.45E-02 |
| 127 | GO:0008643: carbohydrate transport | 3.52E-02 |
| 128 | GO:0016042: lipid catabolic process | 3.71E-02 |
| 129 | GO:0009408: response to heat | 3.81E-02 |
| 130 | GO:0031347: regulation of defense response | 3.81E-02 |
| 131 | GO:0048316: seed development | 4.73E-02 |
| 132 | GO:0009626: plant-type hypersensitive response | 4.84E-02 |
| 133 | GO:0009620: response to fungus | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052873: FMN reductase (NADPH) activity | 0.00E+00 |
| 2 | GO:0008752: FMN reductase activity | 0.00E+00 |
| 3 | GO:0016603: glutaminyl-peptide cyclotransferase activity | 0.00E+00 |
| 4 | GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor | 0.00E+00 |
| 5 | GO:0033759: flavone synthase activity | 0.00E+00 |
| 6 | GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity | 0.00E+00 |
| 7 | GO:0010298: dihydrocamalexic acid decarboxylase activity | 0.00E+00 |
| 8 | GO:0005212: structural constituent of eye lens | 0.00E+00 |
| 9 | GO:0004674: protein serine/threonine kinase activity | 1.68E-06 |
| 10 | GO:0016301: kinase activity | 2.35E-06 |
| 11 | GO:0005509: calcium ion binding | 2.14E-05 |
| 12 | GO:0004656: procollagen-proline 4-dioxygenase activity | 6.27E-05 |
| 13 | GO:0004708: MAP kinase kinase activity | 1.08E-04 |
| 14 | GO:0004630: phospholipase D activity | 1.36E-04 |
| 15 | GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity | 1.36E-04 |
| 16 | GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity | 1.52E-04 |
| 17 | GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity | 1.52E-04 |
| 18 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.52E-04 |
| 19 | GO:0008809: carnitine racemase activity | 1.52E-04 |
| 20 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 1.52E-04 |
| 21 | GO:0004815: aspartate-tRNA ligase activity | 1.52E-04 |
| 22 | GO:0004325: ferrochelatase activity | 1.52E-04 |
| 23 | GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity | 1.52E-04 |
| 24 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.46E-04 |
| 25 | GO:0019781: NEDD8 activating enzyme activity | 3.47E-04 |
| 26 | GO:0008805: carbon-monoxide oxygenase activity | 3.47E-04 |
| 27 | GO:0031418: L-ascorbic acid binding | 5.64E-04 |
| 28 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 5.68E-04 |
| 29 | GO:0005457: GDP-fucose transmembrane transporter activity | 5.68E-04 |
| 30 | GO:0005524: ATP binding | 5.69E-04 |
| 31 | GO:0005460: UDP-glucose transmembrane transporter activity | 8.13E-04 |
| 32 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 8.13E-04 |
| 33 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 8.13E-04 |
| 34 | GO:0008233: peptidase activity | 8.75E-04 |
| 35 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.08E-03 |
| 36 | GO:0004576: oligosaccharyl transferase activity | 1.08E-03 |
| 37 | GO:0004834: tryptophan synthase activity | 1.08E-03 |
| 38 | GO:0045431: flavonol synthase activity | 1.36E-03 |
| 39 | GO:0005459: UDP-galactose transmembrane transporter activity | 1.36E-03 |
| 40 | GO:0008641: small protein activating enzyme activity | 1.36E-03 |
| 41 | GO:0005546: phosphatidylinositol-4,5-bisphosphate binding | 1.36E-03 |
| 42 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.36E-03 |
| 43 | GO:0008519: ammonium transmembrane transporter activity | 1.67E-03 |
| 44 | GO:0030976: thiamine pyrophosphate binding | 1.67E-03 |
| 45 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.71E-03 |
| 46 | GO:0004747: ribokinase activity | 2.01E-03 |
| 47 | GO:0030247: polysaccharide binding | 2.26E-03 |
| 48 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 2.73E-03 |
| 49 | GO:0008865: fructokinase activity | 2.73E-03 |
| 50 | GO:0005506: iron ion binding | 2.86E-03 |
| 51 | GO:0004568: chitinase activity | 4.40E-03 |
| 52 | GO:0004713: protein tyrosine kinase activity | 4.40E-03 |
| 53 | GO:0031072: heat shock protein binding | 5.83E-03 |
| 54 | GO:0031625: ubiquitin protein ligase binding | 6.04E-03 |
| 55 | GO:0008061: chitin binding | 6.86E-03 |
| 56 | GO:0003712: transcription cofactor activity | 6.86E-03 |
| 57 | GO:0004190: aspartic-type endopeptidase activity | 6.86E-03 |
| 58 | GO:0016746: transferase activity, transferring acyl groups | 7.99E-03 |
| 59 | GO:0004298: threonine-type endopeptidase activity | 9.10E-03 |
| 60 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 9.99E-03 |
| 61 | GO:0008810: cellulase activity | 1.03E-02 |
| 62 | GO:0003756: protein disulfide isomerase activity | 1.09E-02 |
| 63 | GO:0003824: catalytic activity | 1.29E-02 |
| 64 | GO:0004791: thioredoxin-disulfide reductase activity | 1.36E-02 |
| 65 | GO:0010181: FMN binding | 1.36E-02 |
| 66 | GO:0016491: oxidoreductase activity | 1.70E-02 |
| 67 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.10E-02 |
| 68 | GO:0004683: calmodulin-dependent protein kinase activity | 2.18E-02 |
| 69 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.26E-02 |
| 70 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.34E-02 |
| 71 | GO:0046872: metal ion binding | 2.38E-02 |
| 72 | GO:0004497: monooxygenase activity | 2.59E-02 |
| 73 | GO:0050897: cobalt ion binding | 2.60E-02 |
| 74 | GO:0019825: oxygen binding | 2.60E-02 |
| 75 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 2.86E-02 |
| 76 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.34E-02 |
| 77 | GO:0015293: symporter activity | 3.61E-02 |
| 78 | GO:0015171: amino acid transmembrane transporter activity | 4.42E-02 |
| 79 | GO:0045330: aspartyl esterase activity | 4.42E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005886: plasma membrane | 2.22E-07 |
| 2 | GO:0045252: oxoglutarate dehydrogenase complex | 1.52E-04 |
| 3 | GO:0016021: integral component of membrane | 1.57E-04 |
| 4 | GO:0005783: endoplasmic reticulum | 5.85E-04 |
| 5 | GO:0005829: cytosol | 5.95E-04 |
| 6 | GO:0008250: oligosaccharyltransferase complex | 1.36E-03 |
| 7 | GO:0030173: integral component of Golgi membrane | 2.01E-03 |
| 8 | GO:0005788: endoplasmic reticulum lumen | 2.03E-03 |
| 9 | GO:0019773: proteasome core complex, alpha-subunit complex | 3.12E-03 |
| 10 | GO:0031090: organelle membrane | 3.53E-03 |
| 11 | GO:0030665: clathrin-coated vesicle membrane | 3.96E-03 |
| 12 | GO:0017119: Golgi transport complex | 4.40E-03 |
| 13 | GO:0005578: proteinaceous extracellular matrix | 5.83E-03 |
| 14 | GO:0005789: endoplasmic reticulum membrane | 6.17E-03 |
| 15 | GO:0030176: integral component of endoplasmic reticulum membrane | 6.86E-03 |
| 16 | GO:0009506: plasmodesma | 8.49E-03 |
| 17 | GO:0005774: vacuolar membrane | 8.58E-03 |
| 18 | GO:0005839: proteasome core complex | 9.10E-03 |
| 19 | GO:0016592: mediator complex | 1.57E-02 |
| 20 | GO:0071944: cell periphery | 1.64E-02 |
| 21 | GO:0016020: membrane | 1.71E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 1.78E-02 |
| 23 | GO:0000151: ubiquitin ligase complex | 2.34E-02 |
| 24 | GO:0031225: anchored component of membrane | 2.92E-02 |
| 25 | GO:0031902: late endosome membrane | 3.14E-02 |
| 26 | GO:0005618: cell wall | 3.15E-02 |
| 27 | GO:0090406: pollen tube | 3.32E-02 |
| 28 | GO:0000502: proteasome complex | 4.11E-02 |