Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G54270

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
2GO:0071277: cellular response to calcium ion9.19E-07
3GO:0009704: de-etiolation3.71E-05
4GO:0015979: photosynthesis4.73E-05
5GO:0090333: regulation of stomatal closure4.99E-05
6GO:0019684: photosynthesis, light reaction7.14E-05
7GO:0009768: photosynthesis, light harvesting in photosystem I1.30E-04
8GO:0015995: chlorophyll biosynthetic process3.30E-04
9GO:0018298: protein-chromophore linkage3.53E-04
10GO:0010218: response to far red light3.77E-04
11GO:0009637: response to blue light4.13E-04
12GO:0010114: response to red light4.88E-04
13GO:0009658: chloroplast organization1.40E-03
14GO:0006869: lipid transport1.93E-03
15GO:0042742: defense response to bacterium4.97E-03
RankGO TermAdjusted P value
1GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
2GO:0008266: poly(U) RNA binding9.53E-05
3GO:0031409: pigment binding1.12E-04
4GO:0016168: chlorophyll binding3.07E-04
5GO:0008289: lipid binding2.61E-03
6GO:0005509: calcium ion binding4.70E-03
7GO:0046872: metal ion binding8.60E-03
RankGO TermAdjusted P value
1GO:0009534: chloroplast thylakoid1.08E-08
2GO:0009535: chloroplast thylakoid membrane2.16E-07
3GO:0009579: thylakoid2.02E-06
4GO:0009941: chloroplast envelope6.16E-05
5GO:0030095: chloroplast photosystem II9.53E-05
6GO:0030076: light-harvesting complex1.04E-04
7GO:0009654: photosystem II oxygen evolving complex1.30E-04
8GO:0009522: photosystem I2.09E-04
9GO:0009523: photosystem II2.19E-04
10GO:0019898: extrinsic component of membrane2.19E-04
11GO:0031977: thylakoid lumen4.63E-04
12GO:0009706: chloroplast inner membrane7.44E-04
13GO:0010287: plastoglobule8.29E-04
14GO:0009543: chloroplast thylakoid lumen8.59E-04
15GO:0009507: chloroplast2.70E-03
16GO:0048046: apoplast1.22E-02
17GO:0009570: chloroplast stroma1.86E-02
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Gene type



Gene DE type