GO Enrichment Analysis of Co-expressed Genes with
AT5G53160
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 4 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 5 | GO:0006412: translation | 2.64E-07 |
| 6 | GO:0015979: photosynthesis | 6.85E-07 |
| 7 | GO:0042254: ribosome biogenesis | 6.16E-06 |
| 8 | GO:0032544: plastid translation | 3.64E-05 |
| 9 | GO:0009443: pyridoxal 5'-phosphate salvage | 6.42E-05 |
| 10 | GO:1904966: positive regulation of vitamin E biosynthetic process | 6.42E-05 |
| 11 | GO:1904964: positive regulation of phytol biosynthetic process | 6.42E-05 |
| 12 | GO:0042371: vitamin K biosynthetic process | 6.42E-05 |
| 13 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.55E-04 |
| 14 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.55E-04 |
| 15 | GO:0006518: peptide metabolic process | 2.63E-04 |
| 16 | GO:2001141: regulation of RNA biosynthetic process | 3.82E-04 |
| 17 | GO:0006241: CTP biosynthetic process | 3.82E-04 |
| 18 | GO:0006165: nucleoside diphosphate phosphorylation | 3.82E-04 |
| 19 | GO:0006228: UTP biosynthetic process | 3.82E-04 |
| 20 | GO:0006183: GTP biosynthetic process | 5.10E-04 |
| 21 | GO:0009735: response to cytokinin | 5.73E-04 |
| 22 | GO:0010236: plastoquinone biosynthetic process | 6.45E-04 |
| 23 | GO:0006655: phosphatidylglycerol biosynthetic process | 7.90E-04 |
| 24 | GO:0010190: cytochrome b6f complex assembly | 7.90E-04 |
| 25 | GO:0032973: amino acid export | 7.90E-04 |
| 26 | GO:0018298: protein-chromophore linkage | 8.14E-04 |
| 27 | GO:0042372: phylloquinone biosynthetic process | 9.40E-04 |
| 28 | GO:0009955: adaxial/abaxial pattern specification | 9.40E-04 |
| 29 | GO:1901259: chloroplast rRNA processing | 9.40E-04 |
| 30 | GO:0009637: response to blue light | 1.02E-03 |
| 31 | GO:0006821: chloride transport | 1.10E-03 |
| 32 | GO:0009772: photosynthetic electron transport in photosystem II | 1.10E-03 |
| 33 | GO:0043090: amino acid import | 1.10E-03 |
| 34 | GO:0010114: response to red light | 1.30E-03 |
| 35 | GO:0045454: cell redox homeostasis | 1.41E-03 |
| 36 | GO:0017004: cytochrome complex assembly | 1.44E-03 |
| 37 | GO:0071482: cellular response to light stimulus | 1.44E-03 |
| 38 | GO:0009821: alkaloid biosynthetic process | 1.62E-03 |
| 39 | GO:0080144: amino acid homeostasis | 1.62E-03 |
| 40 | GO:0006535: cysteine biosynthetic process from serine | 2.01E-03 |
| 41 | GO:0019684: photosynthesis, light reaction | 2.21E-03 |
| 42 | GO:0043085: positive regulation of catalytic activity | 2.21E-03 |
| 43 | GO:0006352: DNA-templated transcription, initiation | 2.21E-03 |
| 44 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.42E-03 |
| 45 | GO:0009767: photosynthetic electron transport chain | 2.64E-03 |
| 46 | GO:0010207: photosystem II assembly | 2.87E-03 |
| 47 | GO:0019344: cysteine biosynthetic process | 3.57E-03 |
| 48 | GO:0000027: ribosomal large subunit assembly | 3.57E-03 |
| 49 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.82E-03 |
| 50 | GO:0019915: lipid storage | 4.08E-03 |
| 51 | GO:0061077: chaperone-mediated protein folding | 4.08E-03 |
| 52 | GO:0009411: response to UV | 4.60E-03 |
| 53 | GO:0006662: glycerol ether metabolic process | 5.72E-03 |
| 54 | GO:0009567: double fertilization forming a zygote and endosperm | 7.55E-03 |
| 55 | GO:0015995: chlorophyll biosynthetic process | 9.57E-03 |
| 56 | GO:0006508: proteolysis | 1.04E-02 |
| 57 | GO:0010218: response to far red light | 1.10E-02 |
| 58 | GO:0034599: cellular response to oxidative stress | 1.25E-02 |
| 59 | GO:0030001: metal ion transport | 1.33E-02 |
| 60 | GO:0042542: response to hydrogen peroxide | 1.41E-02 |
| 61 | GO:0006812: cation transport | 1.71E-02 |
| 62 | GO:0009585: red, far-red light phototransduction | 1.80E-02 |
| 63 | GO:0009793: embryo development ending in seed dormancy | 2.68E-02 |
| 64 | GO:0009058: biosynthetic process | 2.81E-02 |
| 65 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 4.40E-02 |
| 66 | GO:0009658: chloroplast organization | 4.65E-02 |
| 67 | GO:0009860: pollen tube growth | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 2 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 3 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 4 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 5 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 6 | GO:0003735: structural constituent of ribosome | 3.07E-08 |
| 7 | GO:0019843: rRNA binding | 8.20E-07 |
| 8 | GO:0005528: FK506 binding | 3.50E-06 |
| 9 | GO:0004033: aldo-keto reductase (NADP) activity | 2.83E-05 |
| 10 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.23E-04 |
| 11 | GO:0015035: protein disulfide oxidoreductase activity | 2.57E-04 |
| 12 | GO:0070402: NADPH binding | 2.63E-04 |
| 13 | GO:0005509: calcium ion binding | 3.18E-04 |
| 14 | GO:0004550: nucleoside diphosphate kinase activity | 3.82E-04 |
| 15 | GO:0008097: 5S rRNA binding | 3.82E-04 |
| 16 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 5.10E-04 |
| 17 | GO:0004659: prenyltransferase activity | 5.10E-04 |
| 18 | GO:0001053: plastid sigma factor activity | 5.10E-04 |
| 19 | GO:0016987: sigma factor activity | 5.10E-04 |
| 20 | GO:0043495: protein anchor | 5.10E-04 |
| 21 | GO:0016168: chlorophyll binding | 6.66E-04 |
| 22 | GO:0005247: voltage-gated chloride channel activity | 7.90E-04 |
| 23 | GO:0004222: metalloendopeptidase activity | 8.94E-04 |
| 24 | GO:0004124: cysteine synthase activity | 9.40E-04 |
| 25 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 9.40E-04 |
| 26 | GO:0019899: enzyme binding | 1.10E-03 |
| 27 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.40E-03 |
| 28 | GO:0016844: strictosidine synthase activity | 1.81E-03 |
| 29 | GO:0008047: enzyme activator activity | 2.01E-03 |
| 30 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.21E-03 |
| 31 | GO:0031409: pigment binding | 3.33E-03 |
| 32 | GO:0022891: substrate-specific transmembrane transporter activity | 4.60E-03 |
| 33 | GO:0047134: protein-disulfide reductase activity | 5.15E-03 |
| 34 | GO:0004791: thioredoxin-disulfide reductase activity | 6.01E-03 |
| 35 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.24E-03 |
| 36 | GO:0008237: metallopeptidase activity | 7.88E-03 |
| 37 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 9.93E-03 |
| 38 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.25E-02 |
| 39 | GO:0009055: electron carrier activity | 1.27E-02 |
| 40 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.80E-02 |
| 41 | GO:0015171: amino acid transmembrane transporter activity | 1.93E-02 |
| 42 | GO:0016746: transferase activity, transferring acyl groups | 2.36E-02 |
| 43 | GO:0030170: pyridoxal phosphate binding | 2.92E-02 |
| 44 | GO:0004252: serine-type endopeptidase activity | 2.92E-02 |
| 45 | GO:0015297: antiporter activity | 3.30E-02 |
| 46 | GO:0042802: identical protein binding | 4.04E-02 |
| 47 | GO:0003723: RNA binding | 4.12E-02 |
| 48 | GO:0016788: hydrolase activity, acting on ester bonds | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 6.47E-36 |
| 3 | GO:0009570: chloroplast stroma | 1.72E-22 |
| 4 | GO:0009941: chloroplast envelope | 2.02E-18 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 2.14E-17 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 4.79E-17 |
| 7 | GO:0009579: thylakoid | 9.75E-14 |
| 8 | GO:0031977: thylakoid lumen | 1.33E-13 |
| 9 | GO:0009654: photosystem II oxygen evolving complex | 2.99E-10 |
| 10 | GO:0019898: extrinsic component of membrane | 2.59E-09 |
| 11 | GO:0005840: ribosome | 2.70E-08 |
| 12 | GO:0009534: chloroplast thylakoid | 4.94E-08 |
| 13 | GO:0009344: nitrite reductase complex [NAD(P)H] | 6.42E-05 |
| 14 | GO:0030095: chloroplast photosystem II | 1.23E-04 |
| 15 | GO:0031969: chloroplast membrane | 1.39E-04 |
| 16 | GO:0015935: small ribosomal subunit | 2.16E-04 |
| 17 | GO:0009509: chromoplast | 2.63E-04 |
| 18 | GO:0034707: chloride channel complex | 7.90E-04 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.62E-03 |
| 20 | GO:0005763: mitochondrial small ribosomal subunit | 1.62E-03 |
| 21 | GO:0000311: plastid large ribosomal subunit | 2.42E-03 |
| 22 | GO:0030076: light-harvesting complex | 3.09E-03 |
| 23 | GO:0042651: thylakoid membrane | 3.82E-03 |
| 24 | GO:0009522: photosystem I | 6.01E-03 |
| 25 | GO:0009523: photosystem II | 6.31E-03 |
| 26 | GO:0016592: mediator complex | 6.92E-03 |
| 27 | GO:0022625: cytosolic large ribosomal subunit | 8.45E-03 |
| 28 | GO:0009536: plastid | 1.20E-02 |
| 29 | GO:0016020: membrane | 1.35E-02 |
| 30 | GO:0016021: integral component of membrane | 1.69E-02 |
| 31 | GO:0009706: chloroplast inner membrane | 2.31E-02 |
| 32 | GO:0010287: plastoglobule | 2.61E-02 |