GO Enrichment Analysis of Co-expressed Genes with
AT5G52650
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0009967: positive regulation of signal transduction | 0.00E+00 |
| 3 | GO:0006412: translation | 1.71E-130 |
| 4 | GO:0042254: ribosome biogenesis | 5.99E-47 |
| 5 | GO:0000027: ribosomal large subunit assembly | 5.57E-11 |
| 6 | GO:0009735: response to cytokinin | 1.37E-07 |
| 7 | GO:0009955: adaxial/abaxial pattern specification | 5.98E-07 |
| 8 | GO:0000028: ribosomal small subunit assembly | 1.50E-06 |
| 9 | GO:0002181: cytoplasmic translation | 4.34E-06 |
| 10 | GO:0042274: ribosomal small subunit biogenesis | 1.88E-05 |
| 11 | GO:0071215: cellular response to abscisic acid stimulus | 4.68E-05 |
| 12 | GO:0009409: response to cold | 7.72E-05 |
| 13 | GO:0006407: rRNA export from nucleus | 1.54E-04 |
| 14 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.54E-04 |
| 15 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.54E-04 |
| 16 | GO:0006007: glucose catabolic process | 1.54E-04 |
| 17 | GO:0009793: embryo development ending in seed dormancy | 3.44E-04 |
| 18 | GO:0048569: post-embryonic animal organ development | 3.51E-04 |
| 19 | GO:0006626: protein targeting to mitochondrion | 3.67E-04 |
| 20 | GO:0006414: translational elongation | 4.19E-04 |
| 21 | GO:0009965: leaf morphogenesis | 5.71E-04 |
| 22 | GO:0010476: gibberellin mediated signaling pathway | 5.75E-04 |
| 23 | GO:0042256: mature ribosome assembly | 5.75E-04 |
| 24 | GO:0090506: axillary shoot meristem initiation | 5.75E-04 |
| 25 | GO:0006364: rRNA processing | 7.17E-04 |
| 26 | GO:0040007: growth | 8.23E-04 |
| 27 | GO:0070301: cellular response to hydrogen peroxide | 8.23E-04 |
| 28 | GO:0006241: CTP biosynthetic process | 8.23E-04 |
| 29 | GO:0006165: nucleoside diphosphate phosphorylation | 8.23E-04 |
| 30 | GO:0006228: UTP biosynthetic process | 8.23E-04 |
| 31 | GO:2000032: regulation of secondary shoot formation | 1.09E-03 |
| 32 | GO:0006183: GTP biosynthetic process | 1.09E-03 |
| 33 | GO:0071493: cellular response to UV-B | 1.38E-03 |
| 34 | GO:0009845: seed germination | 1.62E-03 |
| 35 | GO:0000470: maturation of LSU-rRNA | 1.70E-03 |
| 36 | GO:0046686: response to cadmium ion | 1.85E-03 |
| 37 | GO:0000911: cytokinesis by cell plate formation | 2.03E-03 |
| 38 | GO:0001558: regulation of cell growth | 3.16E-03 |
| 39 | GO:0000387: spliceosomal snRNP assembly | 4.01E-03 |
| 40 | GO:0008283: cell proliferation | 4.13E-03 |
| 41 | GO:0009644: response to high light intensity | 4.47E-03 |
| 42 | GO:0010015: root morphogenesis | 4.92E-03 |
| 43 | GO:0006913: nucleocytoplasmic transport | 4.92E-03 |
| 44 | GO:0006820: anion transport | 5.41E-03 |
| 45 | GO:0010229: inflorescence development | 5.91E-03 |
| 46 | GO:0010102: lateral root morphogenesis | 5.91E-03 |
| 47 | GO:0006417: regulation of translation | 6.15E-03 |
| 48 | GO:0048367: shoot system development | 6.78E-03 |
| 49 | GO:0030150: protein import into mitochondrial matrix | 8.05E-03 |
| 50 | GO:0051302: regulation of cell division | 8.63E-03 |
| 51 | GO:0007005: mitochondrion organization | 9.82E-03 |
| 52 | GO:0000413: protein peptidyl-prolyl isomerization | 1.24E-02 |
| 53 | GO:0010118: stomatal movement | 1.24E-02 |
| 54 | GO:0009749: response to glucose | 1.44E-02 |
| 55 | GO:0009791: post-embryonic development | 1.44E-02 |
| 56 | GO:0032502: developmental process | 1.59E-02 |
| 57 | GO:0010090: trichome morphogenesis | 1.66E-02 |
| 58 | GO:0010252: auxin homeostasis | 1.74E-02 |
| 59 | GO:0006811: ion transport | 2.55E-02 |
| 60 | GO:0010043: response to zinc ion | 2.64E-02 |
| 61 | GO:0048364: root development | 4.05E-02 |
| 62 | GO:0006096: glycolytic process | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 2 | GO:0005078: MAP-kinase scaffold activity | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 7.39E-163 |
| 4 | GO:0003729: mRNA binding | 1.55E-41 |
| 5 | GO:0019843: rRNA binding | 3.34E-11 |
| 6 | GO:0008097: 5S rRNA binding | 1.01E-05 |
| 7 | GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity | 3.51E-04 |
| 8 | GO:0032947: protein complex scaffold | 5.75E-04 |
| 9 | GO:0070181: small ribosomal subunit rRNA binding | 5.75E-04 |
| 10 | GO:0004550: nucleoside diphosphate kinase activity | 8.23E-04 |
| 11 | GO:0008235: metalloexopeptidase activity | 2.39E-03 |
| 12 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.54E-03 |
| 13 | GO:0015288: porin activity | 2.77E-03 |
| 14 | GO:0008308: voltage-gated anion channel activity | 3.16E-03 |
| 15 | GO:0015266: protein channel activity | 5.91E-03 |
| 16 | GO:0003723: RNA binding | 6.36E-03 |
| 17 | GO:0004871: signal transducer activity | 6.71E-03 |
| 18 | GO:0000166: nucleotide binding | 1.71E-02 |
| 19 | GO:0030145: manganese ion binding | 2.64E-02 |
| 20 | GO:0003746: translation elongation factor activity | 2.81E-02 |
| 21 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0022626: cytosolic ribosome | 6.52E-124 |
| 3 | GO:0022625: cytosolic large ribosomal subunit | 3.93E-97 |
| 4 | GO:0005840: ribosome | 4.17E-95 |
| 5 | GO:0022627: cytosolic small ribosomal subunit | 4.27E-59 |
| 6 | GO:0005730: nucleolus | 1.69E-45 |
| 7 | GO:0005829: cytosol | 8.84E-41 |
| 8 | GO:0005737: cytoplasm | 1.68E-37 |
| 9 | GO:0009506: plasmodesma | 3.35E-34 |
| 10 | GO:0015934: large ribosomal subunit | 7.61E-26 |
| 11 | GO:0005774: vacuolar membrane | 1.06E-16 |
| 12 | GO:0016020: membrane | 2.13E-15 |
| 13 | GO:0005773: vacuole | 9.51E-13 |
| 14 | GO:0015935: small ribosomal subunit | 9.57E-13 |
| 15 | GO:0005618: cell wall | 9.93E-11 |
| 16 | GO:0005886: plasma membrane | 4.05E-10 |
| 17 | GO:0009507: chloroplast | 8.04E-06 |
| 18 | GO:0005742: mitochondrial outer membrane translocase complex | 1.39E-04 |
| 19 | GO:0030686: 90S preribosome | 1.54E-04 |
| 20 | GO:0034719: SMN-Sm protein complex | 5.75E-04 |
| 21 | GO:0005853: eukaryotic translation elongation factor 1 complex | 5.75E-04 |
| 22 | GO:0005682: U5 snRNP | 1.09E-03 |
| 23 | GO:0005687: U4 snRNP | 1.38E-03 |
| 24 | GO:0097526: spliceosomal tri-snRNP complex | 1.38E-03 |
| 25 | GO:0005689: U12-type spliceosomal complex | 2.03E-03 |
| 26 | GO:0071004: U2-type prespliceosome | 2.77E-03 |
| 27 | GO:0046930: pore complex | 3.16E-03 |
| 28 | GO:0005763: mitochondrial small ribosomal subunit | 3.58E-03 |
| 29 | GO:0005685: U1 snRNP | 3.58E-03 |
| 30 | GO:0071011: precatalytic spliceosome | 4.01E-03 |
| 31 | GO:0005686: U2 snRNP | 4.46E-03 |
| 32 | GO:0005740: mitochondrial envelope | 4.46E-03 |
| 33 | GO:0071013: catalytic step 2 spliceosome | 4.92E-03 |
| 34 | GO:0019013: viral nucleocapsid | 5.91E-03 |
| 35 | GO:0005834: heterotrimeric G-protein complex | 7.00E-03 |
| 36 | GO:0005758: mitochondrial intermembrane space | 8.05E-03 |
| 37 | GO:0005741: mitochondrial outer membrane | 9.22E-03 |
| 38 | GO:0005622: intracellular | 9.47E-03 |
| 39 | GO:0030529: intracellular ribonucleoprotein complex | 1.97E-02 |
| 40 | GO:0005743: mitochondrial inner membrane | 3.62E-02 |
| 41 | GO:0005681: spliceosomal complex | 4.69E-02 |