co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G50460

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
2	GO:0019307: mannose biosynthetic process	0.00E+00
3	GO:0072321: chaperone-mediated protein transport	0.00E+00
4	GO:0072722: response to amitrole	0.00E+00
5	GO:0006042: glucosamine biosynthetic process	0.00E+00
6	GO:1901137: carbohydrate derivative biosynthetic process	0.00E+00
7	GO:0080056: petal vascular tissue pattern formation	0.00E+00
8	GO:0045047: protein targeting to ER	0.00E+00
9	GO:0031564: transcription antitermination	0.00E+00
10	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
11	GO:0034976: response to endoplasmic reticulum stress	2.01E-13
12	GO:0006457: protein folding	7.13E-12
13	GO:0045454: cell redox homeostasis	4.60E-09
14	GO:0046686: response to cadmium ion	1.94E-08
15	GO:0018279: protein N-linked glycosylation via asparagine	1.50E-07
16	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	1.05E-06
17	GO:0009651: response to salt stress	7.90E-06
18	GO:0009627: systemic acquired resistance	9.28E-06
19	GO:0000162: tryptophan biosynthetic process	1.89E-05
20	GO:0006099: tricarboxylic acid cycle	2.30E-05
21	GO:0009306: protein secretion	4.74E-05
22	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	5.87E-05
23	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	7.88E-05
24	GO:0009553: embryo sac development	1.12E-04
25	GO:0030968: endoplasmic reticulum unfolded protein response	1.27E-04
26	GO:0019673: GDP-mannose metabolic process	1.46E-04
27	GO:0051775: response to redox state	1.46E-04
28	GO:0042964: thioredoxin reduction	1.46E-04
29	GO:0043266: regulation of potassium ion transport	1.46E-04
30	GO:0010266: response to vitamin B1	1.46E-04
31	GO:0019276: UDP-N-acetylgalactosamine metabolic process	1.46E-04
32	GO:0006047: UDP-N-acetylglucosamine metabolic process	1.46E-04
33	GO:0043687: post-translational protein modification	1.46E-04
34	GO:0006979: response to oxidative stress	1.47E-04
35	GO:0015865: purine nucleotide transport	3.33E-04
36	GO:0030003: cellular cation homeostasis	3.33E-04
37	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	3.33E-04
38	GO:0006487: protein N-linked glycosylation	5.33E-04
39	GO:0006013: mannose metabolic process	5.47E-04
40	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	5.47E-04
41	GO:0055074: calcium ion homeostasis	5.47E-04
42	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	5.47E-04
43	GO:0006651: diacylglycerol biosynthetic process	5.47E-04
44	GO:0006011: UDP-glucose metabolic process	5.47E-04
45	GO:0010272: response to silver ion	5.47E-04
46	GO:0045039: protein import into mitochondrial inner membrane	5.47E-04
47	GO:0009846: pollen germination	5.96E-04
48	GO:0009298: GDP-mannose biosynthetic process	7.83E-04
49	GO:0046902: regulation of mitochondrial membrane permeability	7.83E-04
50	GO:0072334: UDP-galactose transmembrane transport	7.83E-04
51	GO:0007276: gamete generation	7.83E-04
52	GO:0033014: tetrapyrrole biosynthetic process	7.83E-04
53	GO:0048316: seed development	8.36E-04
54	GO:0000956: nuclear-transcribed mRNA catabolic process	1.04E-03
55	GO:0051365: cellular response to potassium ion starvation	1.04E-03
56	GO:0010483: pollen tube reception	1.04E-03
57	GO:0045088: regulation of innate immune response	1.04E-03
58	GO:0015031: protein transport	1.06E-03
59	GO:0046283: anthocyanin-containing compound metabolic process	1.31E-03
60	GO:0009697: salicylic acid biosynthetic process	1.31E-03
61	GO:0047484: regulation of response to osmotic stress	1.61E-03
62	GO:0009615: response to virus	1.81E-03
63	GO:0009423: chorismate biosynthetic process	1.93E-03
64	GO:0010555: response to mannitol	1.93E-03
65	GO:0042372: phylloquinone biosynthetic process	1.93E-03
66	GO:0009617: response to bacterium	2.50E-03
67	GO:0006605: protein targeting	2.63E-03
68	GO:0031540: regulation of anthocyanin biosynthetic process	2.63E-03
69	GO:0055075: potassium ion homeostasis	2.63E-03
70	GO:0006102: isocitrate metabolic process	2.63E-03
71	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.63E-03
72	GO:0010043: response to zinc ion	2.72E-03
73	GO:0010204: defense response signaling pathway, resistance gene-independent	3.00E-03
74	GO:0019430: removal of superoxide radicals	3.00E-03
75	GO:0006783: heme biosynthetic process	3.40E-03
76	GO:0015780: nucleotide-sugar transport	3.40E-03
77	GO:0098656: anion transmembrane transport	3.40E-03
78	GO:0009555: pollen development	3.52E-03
79	GO:0010205: photoinhibition	3.81E-03
80	GO:0043067: regulation of programmed cell death	3.81E-03
81	GO:0009744: response to sucrose	3.83E-03
82	GO:0006032: chitin catabolic process	4.23E-03
83	GO:0009073: aromatic amino acid family biosynthetic process	4.67E-03
84	GO:0000272: polysaccharide catabolic process	4.67E-03
85	GO:0006816: calcium ion transport	4.67E-03
86	GO:0052544: defense response by callose deposition in cell wall	4.67E-03
87	GO:0006790: sulfur compound metabolic process	5.13E-03
88	GO:0006820: anion transport	5.13E-03
89	GO:0006486: protein glycosylation	5.15E-03
90	GO:0006626: protein targeting to mitochondrion	5.60E-03
91	GO:0018107: peptidyl-threonine phosphorylation	5.60E-03
92	GO:0010075: regulation of meristem growth	5.60E-03
93	GO:0006094: gluconeogenesis	5.60E-03
94	GO:0010588: cotyledon vascular tissue pattern formation	5.60E-03
95	GO:0009934: regulation of meristem structural organization	6.09E-03
96	GO:0006541: glutamine metabolic process	6.09E-03
97	GO:0019853: L-ascorbic acid biosynthetic process	6.59E-03
98	GO:0046854: phosphatidylinositol phosphorylation	6.59E-03
99	GO:0080147: root hair cell development	7.63E-03
100	GO:0051302: regulation of cell division	8.18E-03
101	GO:0006874: cellular calcium ion homeostasis	8.18E-03
102	GO:0016998: cell wall macromolecule catabolic process	8.73E-03
103	GO:0030433: ubiquitin-dependent ERAD pathway	9.30E-03
104	GO:0031348: negative regulation of defense response	9.30E-03
105	GO:0071456: cellular response to hypoxia	9.30E-03
106	GO:0009414: response to water deprivation	9.90E-03
107	GO:0042742: defense response to bacterium	1.03E-02
108	GO:0009790: embryo development	1.07E-02
109	GO:0000413: protein peptidyl-prolyl isomerization	1.17E-02
110	GO:0010118: stomatal movement	1.17E-02
111	GO:0010305: leaf vascular tissue pattern formation	1.24E-02
112	GO:0010197: polar nucleus fusion	1.24E-02
113	GO:0048868: pollen tube development	1.24E-02
114	GO:0010154: fruit development	1.24E-02
115	GO:0010150: leaf senescence	1.27E-02
116	GO:0009851: auxin biosynthetic process	1.37E-02
117	GO:0009735: response to cytokinin	1.38E-02
118	GO:0009630: gravitropism	1.50E-02
119	GO:0007264: small GTPase mediated signal transduction	1.50E-02
120	GO:0009409: response to cold	1.62E-02
121	GO:0009567: double fertilization forming a zygote and endosperm	1.64E-02
122	GO:0009826: unidimensional cell growth	1.89E-02
123	GO:0042254: ribosome biogenesis	2.01E-02
124	GO:0006906: vesicle fusion	2.01E-02
125	GO:0015995: chlorophyll biosynthetic process	2.09E-02
126	GO:0016311: dephosphorylation	2.17E-02
127	GO:0016049: cell growth	2.17E-02
128	GO:0006511: ubiquitin-dependent protein catabolic process	2.28E-02
129	GO:0006499: N-terminal protein myristoylation	2.41E-02
130	GO:0009631: cold acclimation	2.49E-02
131	GO:0006414: translational elongation	2.56E-02
132	GO:0016192: vesicle-mediated transport	2.57E-02
133	GO:0016051: carbohydrate biosynthetic process	2.66E-02
134	GO:0006887: exocytosis	3.01E-02
135	GO:0006886: intracellular protein transport	3.01E-02
136	GO:0042542: response to hydrogen peroxide	3.10E-02
137	GO:0051707: response to other organism	3.19E-02
138	GO:0042546: cell wall biogenesis	3.28E-02
139	GO:0009644: response to high light intensity	3.37E-02
140	GO:0009793: embryo development ending in seed dormancy	3.57E-02
141	GO:0009408: response to heat	3.60E-02
142	GO:0009664: plant-type cell wall organization	3.75E-02
143	GO:0048364: root development	3.75E-02
144	GO:0006364: rRNA processing	3.94E-02
145	GO:0010224: response to UV-B	4.04E-02
146	GO:0051603: proteolysis involved in cellular protein catabolic process	4.04E-02
147	GO:0006096: glycolytic process	4.44E-02
148	GO:0048367: shoot system development	4.54E-02
149	GO:0009626: plant-type hypersensitive response	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0004107: chorismate synthase activity	0.00E+00
2	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
3	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
4	GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity	0.00E+00
5	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	0.00E+00
6	GO:0004615: phosphomannomutase activity	0.00E+00
7	GO:0050220: prostaglandin-E synthase activity	0.00E+00
8	GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity	0.00E+00
9	GO:0001072: transcription antitermination factor activity, RNA binding	0.00E+00
10	GO:0003756: protein disulfide isomerase activity	2.20E-10
11	GO:0003746: translation elongation factor activity	1.89E-08
12	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.50E-07
13	GO:0051082: unfolded protein binding	8.03E-06
14	GO:0005460: UDP-glucose transmembrane transporter activity	9.15E-06
15	GO:0005459: UDP-galactose transmembrane transporter activity	2.79E-05
16	GO:0005507: copper ion binding	5.57E-05
17	GO:0008121: ubiquinol-cytochrome-c reductase activity	7.88E-05
18	GO:0004325: ferrochelatase activity	1.46E-04
19	GO:0048037: cofactor binding	1.46E-04
20	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	1.46E-04
21	GO:0008909: isochorismate synthase activity	1.46E-04
22	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	1.46E-04
23	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	1.46E-04
24	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.46E-04
25	GO:0097367: carbohydrate derivative binding	1.46E-04
26	GO:0008446: GDP-mannose 4,6-dehydratase activity	1.46E-04
27	GO:0004048: anthranilate phosphoribosyltransferase activity	1.46E-04
28	GO:0015157: oligosaccharide transmembrane transporter activity	1.46E-04
29	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.33E-04
30	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.33E-04
31	GO:0043021: ribonucleoprotein complex binding	3.33E-04
32	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.33E-04
33	GO:0005525: GTP binding	4.36E-04
34	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	5.47E-04
35	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	5.47E-04
36	GO:0004049: anthranilate synthase activity	5.47E-04
37	GO:0000030: mannosyltransferase activity	5.47E-04
38	GO:0004148: dihydrolipoyl dehydrogenase activity	5.47E-04
39	GO:0004298: threonine-type endopeptidase activity	6.43E-04
40	GO:0004449: isocitrate dehydrogenase (NAD+) activity	7.83E-04
41	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	7.83E-04
42	GO:0008233: peptidase activity	8.02E-04
43	GO:0004576: oligosaccharyl transferase activity	1.04E-03
44	GO:0016004: phospholipase activator activity	1.04E-03
45	GO:0004834: tryptophan synthase activity	1.04E-03
46	GO:0016746: transferase activity, transferring acyl groups	1.05E-03
47	GO:0005471: ATP:ADP antiporter activity	1.31E-03
48	GO:0031369: translation initiation factor binding	1.61E-03
49	GO:0005261: cation channel activity	1.93E-03
50	GO:0004602: glutathione peroxidase activity	1.93E-03
51	GO:0004656: procollagen-proline 4-dioxygenase activity	1.93E-03
52	GO:0008195: phosphatidate phosphatase activity	1.93E-03
53	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.93E-03
54	GO:0008320: protein transmembrane transporter activity	2.27E-03
55	GO:0015288: porin activity	2.63E-03
56	GO:0050897: cobalt ion binding	2.72E-03
57	GO:0008135: translation factor activity, RNA binding	3.00E-03
58	GO:0008308: voltage-gated anion channel activity	3.00E-03
59	GO:0001055: RNA polymerase II activity	3.81E-03
60	GO:0004568: chitinase activity	4.23E-03
61	GO:0051287: NAD binding	4.63E-03
62	GO:0001054: RNA polymerase I activity	4.67E-03
63	GO:0004129: cytochrome-c oxidase activity	4.67E-03
64	GO:0001056: RNA polymerase III activity	5.13E-03
65	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	5.15E-03
66	GO:0005262: calcium channel activity	5.60E-03
67	GO:0008061: chitin binding	6.59E-03
68	GO:0005217: intracellular ligand-gated ion channel activity	6.59E-03
69	GO:0004970: ionotropic glutamate receptor activity	6.59E-03
70	GO:0004190: aspartic-type endopeptidase activity	6.59E-03
71	GO:0003924: GTPase activity	7.48E-03
72	GO:0051536: iron-sulfur cluster binding	7.63E-03
73	GO:0031418: L-ascorbic acid binding	7.63E-03
74	GO:0005509: calcium ion binding	9.08E-03
75	GO:0016779: nucleotidyltransferase activity	9.30E-03
76	GO:0008565: protein transporter activity	1.10E-02
77	GO:0010181: FMN binding	1.30E-02
78	GO:0004791: thioredoxin-disulfide reductase activity	1.30E-02
79	GO:0016853: isomerase activity	1.30E-02
80	GO:0000166: nucleotide binding	1.55E-02
81	GO:0008483: transaminase activity	1.72E-02
82	GO:0030246: carbohydrate binding	2.25E-02
83	GO:0003697: single-stranded DNA binding	2.66E-02
84	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.66E-02
85	GO:0000149: SNARE binding	2.83E-02
86	GO:0050661: NADP binding	2.92E-02
87	GO:0005484: SNAP receptor activity	3.19E-02
88	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.56E-02
89	GO:0009055: electron carrier activity	3.86E-02
90	GO:0003690: double-stranded DNA binding	4.04E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0042719: mitochondrial intermembrane space protein transporter complex	0.00E+00
3	GO:0045252: oxoglutarate dehydrogenase complex	0.00E+00
4	GO:0005783: endoplasmic reticulum	1.03E-20
5	GO:0005788: endoplasmic reticulum lumen	9.87E-19
6	GO:0005774: vacuolar membrane	2.01E-08
7	GO:0009507: chloroplast	2.65E-08
8	GO:0008250: oligosaccharyltransferase complex	1.50E-07
9	GO:0005740: mitochondrial envelope	4.99E-06
10	GO:0005773: vacuole	1.09E-05
11	GO:0000502: proteasome complex	6.21E-05
12	GO:0005739: mitochondrion	6.27E-05
13	GO:0005789: endoplasmic reticulum membrane	8.76E-05
14	GO:0071541: eukaryotic translation initiation factor 3 complex, eIF3m	1.46E-04
15	GO:0030134: ER to Golgi transport vesicle	3.33E-04
16	GO:0070545: PeBoW complex	3.33E-04
17	GO:0005750: mitochondrial respiratory chain complex III	3.85E-04
18	GO:0009506: plasmodesma	4.15E-04
19	GO:0030176: integral component of endoplasmic reticulum membrane	4.32E-04
20	GO:0005839: proteasome core complex	6.43E-04
21	GO:0016020: membrane	6.90E-04
22	GO:1990726: Lsm1-7-Pat1 complex	7.83E-04
23	GO:0048046: apoplast	8.62E-04
24	GO:0005829: cytosol	1.01E-03
25	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.04E-03
26	GO:0009505: plant-type cell wall	1.04E-03
27	GO:0030660: Golgi-associated vesicle membrane	1.04E-03
28	GO:0005794: Golgi apparatus	1.09E-03
29	GO:0005886: plasma membrane	1.20E-03
30	GO:0005746: mitochondrial respiratory chain	1.31E-03
31	GO:0032588: trans-Golgi network membrane	1.61E-03
32	GO:0005759: mitochondrial matrix	1.77E-03
33	GO:0030173: integral component of Golgi membrane	1.93E-03
34	GO:0031595: nuclear proteasome complex	2.27E-03
35	GO:0030687: preribosome, large subunit precursor	2.27E-03
36	GO:0005688: U6 snRNP	2.63E-03
37	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.63E-03
38	GO:0000326: protein storage vacuole	3.00E-03
39	GO:0046930: pore complex	3.00E-03
40	GO:0019773: proteasome core complex, alpha-subunit complex	3.00E-03
41	GO:0046540: U4/U6 x U5 tri-snRNP complex	3.00E-03
42	GO:0022626: cytosolic ribosome	3.29E-03
43	GO:0031901: early endosome membrane	3.40E-03
44	GO:0005736: DNA-directed RNA polymerase I complex	3.40E-03
45	GO:0009536: plastid	3.79E-03
46	GO:0005666: DNA-directed RNA polymerase III complex	3.81E-03
47	GO:0000418: DNA-directed RNA polymerase IV complex	4.23E-03
48	GO:0005765: lysosomal membrane	4.67E-03
49	GO:0005852: eukaryotic translation initiation factor 3 complex	4.67E-03
50	GO:0008541: proteasome regulatory particle, lid subcomplex	4.67E-03
51	GO:0005665: DNA-directed RNA polymerase II, core complex	5.13E-03
52	GO:0000419: DNA-directed RNA polymerase V complex	7.10E-03
53	GO:0005758: mitochondrial intermembrane space	7.63E-03
54	GO:0005741: mitochondrial outer membrane	8.73E-03
55	GO:0005623: cell	9.42E-03
56	GO:0005618: cell wall	9.94E-03
57	GO:0016592: mediator complex	1.50E-02
58	GO:0032580: Golgi cisterna membrane	1.64E-02
59	GO:0005730: nucleolus	2.26E-02
60	GO:0031201: SNARE complex	3.01E-02
61	GO:0005743: mitochondrial inner membrane	3.35E-02
62	GO:0005681: spliceosomal complex	4.44E-02
63	GO:0005747: mitochondrial respiratory chain complex I	4.54E-02
64	GO:0005834: heterotrimeric G-protein complex	4.65E-02