co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G49930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1903798: regulation of production of miRNAs involved in gene silencing by miRNA	0.00E+00
2	GO:0048363: mucilage pectin metabolic process	9.19E-07
3	GO:1900036: positive regulation of cellular response to heat	9.19E-07
4	GO:0043044: ATP-dependent chromatin remodeling	5.06E-06
5	GO:1901000: regulation of response to salt stress	8.12E-06
6	GO:0080001: mucilage extrusion from seed coat	8.12E-06
7	GO:0006751: glutathione catabolic process	2.06E-05
8	GO:0010199: organ boundary specification between lateral organs and the meristem	2.57E-05
9	GO:0010050: vegetative phase change	3.12E-05
10	GO:0040029: regulation of gene expression, epigenetic	3.71E-05
11	GO:1900150: regulation of defense response to fungus	3.71E-05
12	GO:0009827: plant-type cell wall modification	4.33E-05
13	GO:0007034: vacuolar transport	9.53E-05
14	GO:0007030: Golgi organization	1.04E-04
15	GO:0003333: amino acid transmembrane transport	1.40E-04
16	GO:0048278: vesicle docking	1.40E-04
17	GO:0009306: protein secretion	1.68E-04
18	GO:0061025: membrane fusion	2.09E-04
19	GO:0016579: protein deubiquitination	2.84E-04
20	GO:0006906: vesicle fusion	3.18E-04
21	GO:0008283: cell proliferation	4.88E-04
22	GO:0000209: protein polyubiquitination	5.00E-04
23	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	5.52E-04
24	GO:0048367: shoot system development	6.73E-04
25	GO:0016569: covalent chromatin modification	7.14E-04
26	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.13E-03
27	GO:0048366: leaf development	1.56E-03
28	GO:0006886: intracellular protein transport	1.85E-03
29	GO:0048364: root development	2.15E-03
30	GO:0009908: flower development	2.87E-03
31	GO:0006511: ubiquitin-dependent protein catabolic process	3.78E-03
32	GO:0007275: multicellular organism development	7.94E-03
33	GO:0009651: response to salt stress	1.16E-02
34	GO:0006355: regulation of transcription, DNA-templated	2.01E-02

Rank	GO Term	Adjusted P value
1	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
2	GO:0015174: basic amino acid transmembrane transporter activity	5.67E-05
3	GO:0008094: DNA-dependent ATPase activity	1.40E-04
4	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.40E-04
5	GO:0004843: thiol-dependent ubiquitin-specific protease activity	2.30E-04
6	GO:0000149: SNARE binding	4.37E-04
7	GO:0005484: SNAP receptor activity	4.88E-04
8	GO:0015171: amino acid transmembrane transporter activity	6.32E-04
9	GO:0004386: helicase activity	7.86E-04
10	GO:0003682: chromatin binding	1.45E-03
11	GO:0061630: ubiquitin protein ligase activity	1.66E-03
12	GO:0046983: protein dimerization activity	6.06E-03
13	GO:0004842: ubiquitin-protein transferase activity	6.21E-03
14	GO:0016787: hydrolase activity	8.43E-03
15	GO:0003677: DNA binding	1.51E-02
16	GO:0005524: ATP binding	1.99E-02
17	GO:0005515: protein binding	2.66E-02
18	GO:0008270: zinc ion binding	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0031201: SNARE complex	4.63E-04
2	GO:0012505: endomembrane system	7.29E-04
3	GO:0009705: plant-type vacuole membrane	1.05E-03
4	GO:0005802: trans-Golgi network	4.23E-03
5	GO:0005768: endosome	4.62E-03
6	GO:0016021: integral component of membrane	4.67E-03
7	GO:0005774: vacuolar membrane	1.18E-02
8	GO:0005829: cytosol	1.39E-02
9	GO:0005773: vacuole	1.60E-02
10	GO:0009506: plasmodesma	3.08E-02
11	GO:0005794: Golgi apparatus	3.83E-02