co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G49100

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042593: glucose homeostasis	0.00E+00
2	GO:0061157: mRNA destabilization	0.00E+00
3	GO:0033494: ferulate metabolic process	0.00E+00
4	GO:1901698: response to nitrogen compound	0.00E+00
5	GO:2000121: regulation of removal of superoxide radicals	0.00E+00
6	GO:0006833: water transport	9.19E-07
7	GO:0034220: ion transmembrane transport	4.79E-06
8	GO:0009735: response to cytokinin	7.83E-06
9	GO:0080170: hydrogen peroxide transmembrane transport	1.66E-05
10	GO:0009826: unidimensional cell growth	1.98E-04
11	GO:0071588: hydrogen peroxide mediated signaling pathway	2.04E-04
12	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	2.04E-04
13	GO:0046520: sphingoid biosynthetic process	2.04E-04
14	GO:0070509: calcium ion import	2.04E-04
15	GO:0007263: nitric oxide mediated signal transduction	2.04E-04
16	GO:0042254: ribosome biogenesis	2.21E-04
17	GO:0010206: photosystem II repair	2.57E-04
18	GO:0006810: transport	3.02E-04
19	GO:0031648: protein destabilization	4.57E-04
20	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.57E-04
21	GO:0006521: regulation of cellular amino acid metabolic process	4.57E-04
22	GO:0006695: cholesterol biosynthetic process	4.57E-04
23	GO:0015706: nitrate transport	4.78E-04
24	GO:0009725: response to hormone	5.42E-04
25	GO:0010143: cutin biosynthetic process	6.10E-04
26	GO:0045490: pectin catabolic process	6.30E-04
27	GO:0010167: response to nitrate	6.82E-04
28	GO:0010030: positive regulation of seed germination	6.82E-04
29	GO:0015840: urea transport	7.44E-04
30	GO:0071705: nitrogen compound transport	7.44E-04
31	GO:1902476: chloride transmembrane transport	1.06E-03
32	GO:0051513: regulation of monopolar cell growth	1.06E-03
33	GO:0034059: response to anoxia	1.06E-03
34	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	1.06E-03
35	GO:0009664: plant-type cell wall organization	1.07E-03
36	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.20E-03
37	GO:0015976: carbon utilization	1.41E-03
38	GO:0071249: cellular response to nitrate	1.41E-03
39	GO:0045727: positive regulation of translation	1.41E-03
40	GO:0015994: chlorophyll metabolic process	1.41E-03
41	GO:2000122: negative regulation of stomatal complex development	1.41E-03
42	GO:0030104: water homeostasis	1.41E-03
43	GO:0010037: response to carbon dioxide	1.41E-03
44	GO:0009626: plant-type hypersensitive response	1.56E-03
45	GO:0009740: gibberellic acid mediated signaling pathway	1.69E-03
46	GO:0006461: protein complex assembly	1.80E-03
47	GO:0034052: positive regulation of plant-type hypersensitive response	1.80E-03
48	GO:0016132: brassinosteroid biosynthetic process	2.01E-03
49	GO:0000302: response to reactive oxygen species	2.01E-03
50	GO:0042549: photosystem II stabilization	2.21E-03
51	GO:0000741: karyogamy	2.21E-03
52	GO:1902456: regulation of stomatal opening	2.21E-03
53	GO:0009828: plant-type cell wall loosening	2.43E-03
54	GO:0010019: chloroplast-nucleus signaling pathway	2.66E-03
55	GO:0006694: steroid biosynthetic process	2.66E-03
56	GO:0009610: response to symbiotic fungus	3.13E-03
57	GO:0009772: photosynthetic electron transport in photosystem II	3.13E-03
58	GO:0030497: fatty acid elongation	3.13E-03
59	GO:0050829: defense response to Gram-negative bacterium	3.13E-03
60	GO:0006821: chloride transport	3.13E-03
61	GO:0015995: chlorophyll biosynthetic process	3.40E-03
62	GO:0040008: regulation of growth	3.44E-03
63	GO:0046620: regulation of organ growth	3.63E-03
64	GO:0006402: mRNA catabolic process	3.63E-03
65	GO:0030091: protein repair	3.63E-03
66	GO:0043068: positive regulation of programmed cell death	3.63E-03
67	GO:0000160: phosphorelay signal transduction system	3.95E-03
68	GO:0009808: lignin metabolic process	4.15E-03
69	GO:0009932: cell tip growth	4.15E-03
70	GO:0009657: plastid organization	4.15E-03
71	GO:0032544: plastid translation	4.15E-03
72	GO:0009051: pentose-phosphate shunt, oxidative branch	4.70E-03
73	GO:0045337: farnesyl diphosphate biosynthetic process	4.70E-03
74	GO:0051865: protein autoubiquitination	4.70E-03
75	GO:0033384: geranyl diphosphate biosynthetic process	4.70E-03
76	GO:0034599: cellular response to oxidative stress	4.98E-03
77	GO:0006949: syncytium formation	5.86E-03
78	GO:0009299: mRNA transcription	5.86E-03
79	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.86E-03
80	GO:0009658: chloroplast organization	6.35E-03
81	GO:0006412: translation	6.37E-03
82	GO:0010015: root morphogenesis	6.48E-03
83	GO:0000038: very long-chain fatty acid metabolic process	6.48E-03
84	GO:0009698: phenylpropanoid metabolic process	6.48E-03
85	GO:0009773: photosynthetic electron transport in photosystem I	6.48E-03
86	GO:0009750: response to fructose	6.48E-03
87	GO:0016024: CDP-diacylglycerol biosynthetic process	7.12E-03
88	GO:0009733: response to auxin	7.50E-03
89	GO:2000028: regulation of photoperiodism, flowering	7.78E-03
90	GO:0006006: glucose metabolic process	7.78E-03
91	GO:0009736: cytokinin-activated signaling pathway	8.27E-03
92	GO:0080167: response to karrikin	8.35E-03
93	GO:0010207: photosystem II assembly	8.47E-03
94	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.72E-03
95	GO:0015979: photosynthesis	9.89E-03
96	GO:0019762: glucosinolate catabolic process	9.90E-03
97	GO:0010025: wax biosynthetic process	9.90E-03
98	GO:0055085: transmembrane transport	1.04E-02
99	GO:0005992: trehalose biosynthetic process	1.06E-02
100	GO:0042545: cell wall modification	1.14E-02
101	GO:0048511: rhythmic process	1.22E-02
102	GO:0009742: brassinosteroid mediated signaling pathway	1.25E-02
103	GO:0019748: secondary metabolic process	1.30E-02
104	GO:0009814: defense response, incompatible interaction	1.30E-02
105	GO:0035428: hexose transmembrane transport	1.30E-02
106	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.30E-02
107	GO:0006284: base-excision repair	1.47E-02
108	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.55E-02
109	GO:0008152: metabolic process	1.55E-02
110	GO:0010087: phloem or xylem histogenesis	1.64E-02
111	GO:0042631: cellular response to water deprivation	1.64E-02
112	GO:0042335: cuticle development	1.64E-02
113	GO:0042391: regulation of membrane potential	1.64E-02
114	GO:0000413: protein peptidyl-prolyl isomerization	1.64E-02
115	GO:0042744: hydrogen peroxide catabolic process	1.69E-02
116	GO:0046323: glucose import	1.73E-02
117	GO:0010305: leaf vascular tissue pattern formation	1.73E-02
118	GO:0010197: polar nucleus fusion	1.73E-02
119	GO:0042752: regulation of circadian rhythm	1.82E-02
120	GO:0009651: response to salt stress	1.82E-02
121	GO:0009749: response to glucose	1.92E-02
122	GO:0002229: defense response to oomycetes	2.01E-02
123	GO:0007623: circadian rhythm	2.05E-02
124	GO:0009630: gravitropism	2.11E-02
125	GO:0010583: response to cyclopentenone	2.11E-02
126	GO:0009734: auxin-activated signaling pathway	2.11E-02
127	GO:0030163: protein catabolic process	2.21E-02
128	GO:0009739: response to gibberellin	2.29E-02
129	GO:0016126: sterol biosynthetic process	2.61E-02
130	GO:0010027: thylakoid membrane organization	2.61E-02
131	GO:0009416: response to light stimulus	2.82E-02
132	GO:0042128: nitrate assimilation	2.83E-02
133	GO:0010411: xyloglucan metabolic process	2.94E-02
134	GO:0009834: plant-type secondary cell wall biogenesis	3.38E-02
135	GO:0009407: toxin catabolic process	3.38E-02
136	GO:0009631: cold acclimation	3.50E-02
137	GO:0010119: regulation of stomatal movement	3.50E-02
138	GO:0006457: protein folding	3.89E-02
139	GO:0030001: metal ion transport	4.10E-02
140	GO:0009926: auxin polar transport	4.47E-02
141	GO:0009744: response to sucrose	4.47E-02
142	GO:0009640: photomorphogenesis	4.47E-02
143	GO:0042546: cell wall biogenesis	4.60E-02
144	GO:0045454: cell redox homeostasis	4.68E-02
145	GO:0009636: response to toxic substance	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0050614: delta24-sterol reductase activity	0.00E+00
2	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
3	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
4	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
5	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
6	GO:0015250: water channel activity	6.67E-07
7	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.97E-06
8	GO:0019843: rRNA binding	2.92E-06
9	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.48E-06
10	GO:0005528: FK506 binding	4.76E-05
11	GO:0004130: cytochrome-c peroxidase activity	7.23E-05
12	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	2.04E-04
13	GO:0000248: C-5 sterol desaturase activity	2.04E-04
14	GO:0000170: sphingosine hydroxylase activity	2.04E-04
15	GO:0009671: nitrate:proton symporter activity	2.04E-04
16	GO:0015200: methylammonium transmembrane transporter activity	2.04E-04
17	GO:0047746: chlorophyllase activity	4.57E-04
18	GO:0043425: bHLH transcription factor binding	4.57E-04
19	GO:0042284: sphingolipid delta-4 desaturase activity	4.57E-04
20	GO:0003735: structural constituent of ribosome	6.47E-04
21	GO:0010277: chlorophyllide a oxygenase [overall] activity	7.44E-04
22	GO:0050734: hydroxycinnamoyltransferase activity	7.44E-04
23	GO:0016851: magnesium chelatase activity	1.06E-03
24	GO:0030570: pectate lyase activity	1.20E-03
25	GO:0015204: urea transmembrane transporter activity	1.41E-03
26	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.41E-03
27	GO:0005253: anion channel activity	1.41E-03
28	GO:0008725: DNA-3-methyladenine glycosylase activity	1.80E-03
29	GO:0009922: fatty acid elongase activity	1.80E-03
30	GO:0003959: NADPH dehydrogenase activity	1.80E-03
31	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.21E-03
32	GO:0008519: ammonium transmembrane transporter activity	2.21E-03
33	GO:0005247: voltage-gated chloride channel activity	2.21E-03
34	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.21E-03
35	GO:0016688: L-ascorbate peroxidase activity	2.21E-03
36	GO:0000156: phosphorelay response regulator activity	2.28E-03
37	GO:0005242: inward rectifier potassium channel activity	2.66E-03
38	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.66E-03
39	GO:0005261: cation channel activity	2.66E-03
40	GO:0005096: GTPase activator activity	3.95E-03
41	GO:0004337: geranyltranstransferase activity	4.70E-03
42	GO:0003993: acid phosphatase activity	4.98E-03
43	GO:0015112: nitrate transmembrane transporter activity	5.27E-03
44	GO:0004805: trehalose-phosphatase activity	5.86E-03
45	GO:0004185: serine-type carboxypeptidase activity	6.13E-03
46	GO:0004161: dimethylallyltranstransferase activity	6.48E-03
47	GO:0051537: 2 iron, 2 sulfur cluster binding	6.63E-03
48	GO:0004089: carbonate dehydratase activity	7.78E-03
49	GO:0031072: heat shock protein binding	7.78E-03
50	GO:0005262: calcium channel activity	7.78E-03
51	GO:0008266: poly(U) RNA binding	8.47E-03
52	GO:0045330: aspartyl esterase activity	9.16E-03
53	GO:0030552: cAMP binding	9.17E-03
54	GO:0030553: cGMP binding	9.17E-03
55	GO:0008146: sulfotransferase activity	9.17E-03
56	GO:0052689: carboxylic ester hydrolase activity	9.48E-03
57	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	9.90E-03
58	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	9.90E-03
59	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	9.90E-03
60	GO:0030599: pectinesterase activity	1.11E-02
61	GO:0005216: ion channel activity	1.14E-02
62	GO:0016746: transferase activity, transferring acyl groups	1.22E-02
63	GO:0003727: single-stranded RNA binding	1.47E-02
64	GO:0003756: protein disulfide isomerase activity	1.47E-02
65	GO:0016829: lyase activity	1.60E-02
66	GO:0030551: cyclic nucleotide binding	1.64E-02
67	GO:0015144: carbohydrate transmembrane transporter activity	1.77E-02
68	GO:0005355: glucose transmembrane transporter activity	1.82E-02
69	GO:0050662: coenzyme binding	1.82E-02
70	GO:0005351: sugar:proton symporter activity	2.00E-02
71	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.01E-02
72	GO:0048038: quinone binding	2.01E-02
73	GO:0016791: phosphatase activity	2.30E-02
74	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.41E-02
75	GO:0016597: amino acid binding	2.51E-02
76	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.94E-02
77	GO:0102483: scopolin beta-glucosidase activity	2.94E-02
78	GO:0008236: serine-type peptidase activity	3.05E-02
79	GO:0016788: hydrolase activity, acting on ester bonds	3.23E-02
80	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.50E-02
81	GO:0008422: beta-glucosidase activity	3.98E-02
82	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.98E-02
83	GO:0050661: NADP binding	4.10E-02
84	GO:0004364: glutathione transferase activity	4.35E-02
85	GO:0043621: protein self-association	4.73E-02
86	GO:0015293: symporter activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
2	GO:0044391: ribosomal subunit	0.00E+00
3	GO:0009534: chloroplast thylakoid	3.37E-13
4	GO:0009535: chloroplast thylakoid membrane	3.09E-11
5	GO:0009507: chloroplast	7.75E-11
6	GO:0009570: chloroplast stroma	1.74E-09
7	GO:0009543: chloroplast thylakoid lumen	5.86E-09
8	GO:0009941: chloroplast envelope	2.28E-06
9	GO:0031977: thylakoid lumen	7.34E-05
10	GO:0016020: membrane	1.04E-04
11	GO:0005618: cell wall	1.13E-04
12	GO:0009579: thylakoid	1.28E-04
13	GO:0009533: chloroplast stromal thylakoid	1.33E-04
14	GO:0042807: central vacuole	1.33E-04
15	GO:0009505: plant-type cell wall	1.98E-04
16	GO:0043674: columella	2.04E-04
17	GO:0005887: integral component of plasma membrane	2.37E-04
18	GO:0005840: ribosome	5.15E-04
19	GO:0009705: plant-type vacuole membrane	6.30E-04
20	GO:0010007: magnesium chelatase complex	7.44E-04
21	GO:0005774: vacuolar membrane	8.26E-04
22	GO:0031225: anchored component of membrane	1.02E-03
23	GO:0009531: secondary cell wall	1.06E-03
24	GO:0005576: extracellular region	1.21E-03
25	GO:0034707: chloride channel complex	2.21E-03
26	GO:0000326: protein storage vacuole	4.15E-03
27	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.70E-03
28	GO:0008180: COP9 signalosome	4.70E-03
29	GO:0005886: plasma membrane	5.81E-03
30	GO:0005773: vacuole	6.66E-03
31	GO:0000311: plastid large ribosomal subunit	7.12E-03
32	GO:0030095: chloroplast photosystem II	8.47E-03
33	GO:0009506: plasmodesma	1.08E-02
34	GO:0009654: photosystem II oxygen evolving complex	1.14E-02
35	GO:0042651: thylakoid membrane	1.14E-02
36	GO:0009706: chloroplast inner membrane	1.18E-02
37	GO:0015935: small ribosomal subunit	1.22E-02
38	GO:0009523: photosystem II	1.92E-02
39	GO:0019898: extrinsic component of membrane	1.92E-02
40	GO:0048046: apoplast	2.12E-02
41	GO:0071944: cell periphery	2.21E-02
42	GO:0009295: nucleoid	2.41E-02
43	GO:0030529: intracellular ribonucleoprotein complex	2.61E-02
44	GO:0046658: anchored component of plasma membrane	2.71E-02
45	GO:0019005: SCF ubiquitin ligase complex	3.16E-02
46	GO:0015934: large ribosomal subunit	3.50E-02