co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G48900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000505: regulation of energy homeostasis	0.00E+00
2	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	0.00E+00
3	GO:0007638: mechanosensory behavior	0.00E+00
4	GO:0046322: negative regulation of fatty acid oxidation	0.00E+00
5	GO:0032212: positive regulation of telomere maintenance via telomerase	0.00E+00
6	GO:0042493: response to drug	0.00E+00
7	GO:0032206: positive regulation of telomere maintenance	0.00E+00
8	GO:0016042: lipid catabolic process	7.79E-07
9	GO:0071555: cell wall organization	3.24E-06
10	GO:0010306: rhamnogalacturonan II biosynthetic process	3.12E-05
11	GO:0010411: xyloglucan metabolic process	7.28E-05
12	GO:0042546: cell wall biogenesis	2.25E-04
13	GO:0009958: positive gravitropism	2.78E-04
14	GO:0060627: regulation of vesicle-mediated transport	2.92E-04
15	GO:0000032: cell wall mannoprotein biosynthetic process	2.92E-04
16	GO:0032025: response to cobalt ion	2.92E-04
17	GO:0043266: regulation of potassium ion transport	2.92E-04
18	GO:0080051: cutin transport	2.92E-04
19	GO:2000021: regulation of ion homeostasis	2.92E-04
20	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	2.92E-04
21	GO:0009638: phototropism	5.10E-04
22	GO:0010198: synergid death	6.40E-04
23	GO:0015908: fatty acid transport	6.40E-04
24	GO:0043255: regulation of carbohydrate biosynthetic process	6.40E-04
25	GO:0045717: negative regulation of fatty acid biosynthetic process	6.40E-04
26	GO:0010541: acropetal auxin transport	6.40E-04
27	GO:0001736: establishment of planar polarity	6.40E-04
28	GO:0010015: root morphogenesis	6.86E-04
29	GO:0007165: signal transduction	8.63E-04
30	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.69E-04
31	GO:0033591: response to L-ascorbic acid	1.04E-03
32	GO:1902448: positive regulation of shade avoidance	1.04E-03
33	GO:0046168: glycerol-3-phosphate catabolic process	1.04E-03
34	GO:0010160: formation of animal organ boundary	1.04E-03
35	GO:1901562: response to paraquat	1.04E-03
36	GO:2001295: malonyl-CoA biosynthetic process	1.04E-03
37	GO:0090506: axillary shoot meristem initiation	1.04E-03
38	GO:0006633: fatty acid biosynthetic process	1.19E-03
39	GO:0006833: water transport	1.24E-03
40	GO:0006869: lipid transport	1.31E-03
41	GO:0051017: actin filament bundle assembly	1.37E-03
42	GO:0051639: actin filament network formation	1.48E-03
43	GO:0034059: response to anoxia	1.48E-03
44	GO:0080170: hydrogen peroxide transmembrane transport	1.48E-03
45	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.48E-03
46	GO:0006072: glycerol-3-phosphate metabolic process	1.48E-03
47	GO:0009650: UV protection	1.48E-03
48	GO:1901332: negative regulation of lateral root development	1.48E-03
49	GO:0050482: arachidonic acid secretion	1.48E-03
50	GO:0009413: response to flooding	1.48E-03
51	GO:0009298: GDP-mannose biosynthetic process	1.48E-03
52	GO:0051513: regulation of monopolar cell growth	1.48E-03
53	GO:0007231: osmosensory signaling pathway	1.48E-03
54	GO:0007017: microtubule-based process	1.51E-03
55	GO:0009926: auxin polar transport	1.53E-03
56	GO:0009739: response to gibberellin	1.62E-03
57	GO:0016998: cell wall macromolecule catabolic process	1.66E-03
58	GO:0030245: cellulose catabolic process	1.81E-03
59	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.98E-03
60	GO:0051764: actin crosslink formation	1.99E-03
61	GO:0006085: acetyl-CoA biosynthetic process	1.99E-03
62	GO:0006183: GTP biosynthetic process	1.99E-03
63	GO:0022622: root system development	1.99E-03
64	GO:0033500: carbohydrate homeostasis	1.99E-03
65	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.99E-03
66	GO:0009956: radial pattern formation	1.99E-03
67	GO:0010222: stem vascular tissue pattern formation	1.99E-03
68	GO:0009664: plant-type cell wall organization	2.05E-03
69	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.32E-03
70	GO:0034220: ion transmembrane transport	2.51E-03
71	GO:0048868: pollen tube development	2.71E-03
72	GO:0060918: auxin transport	3.14E-03
73	GO:0006796: phosphate-containing compound metabolic process	3.14E-03
74	GO:0010337: regulation of salicylic acid metabolic process	3.14E-03
75	GO:0006014: D-ribose metabolic process	3.14E-03
76	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.14E-03
77	GO:0071554: cell wall organization or biogenesis	3.34E-03
78	GO:0009624: response to nematode	3.51E-03
79	GO:0005975: carbohydrate metabolic process	3.64E-03
80	GO:0010067: procambium histogenesis	3.77E-03
81	GO:0009612: response to mechanical stimulus	3.77E-03
82	GO:0009942: longitudinal axis specification	3.77E-03
83	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.77E-03
84	GO:0009828: plant-type cell wall loosening	4.04E-03
85	GO:0009645: response to low light intensity stimulus	4.45E-03
86	GO:0032880: regulation of protein localization	4.45E-03
87	GO:0006644: phospholipid metabolic process	5.17E-03
88	GO:0007389: pattern specification process	5.92E-03
89	GO:0010311: lateral root formation	6.61E-03
90	GO:0006629: lipid metabolic process	6.69E-03
91	GO:0006754: ATP biosynthetic process	6.71E-03
92	GO:0055085: transmembrane transport	6.73E-03
93	GO:0045490: pectin catabolic process	7.04E-03
94	GO:0048527: lateral root development	7.28E-03
95	GO:0000723: telomere maintenance	7.54E-03
96	GO:0009737: response to abscisic acid	7.57E-03
97	GO:0009651: response to salt stress	7.77E-03
98	GO:0016051: carbohydrate biosynthetic process	7.98E-03
99	GO:0006032: chitin catabolic process	8.40E-03
100	GO:0048829: root cap development	8.40E-03
101	GO:0006949: syncytium formation	8.40E-03
102	GO:0006816: calcium ion transport	9.30E-03
103	GO:0048765: root hair cell differentiation	9.30E-03
104	GO:0009684: indoleacetic acid biosynthetic process	9.30E-03
105	GO:0046856: phosphatidylinositol dephosphorylation	9.30E-03
106	GO:0008361: regulation of cell size	1.02E-02
107	GO:0006820: anion transport	1.02E-02
108	GO:0016024: CDP-diacylglycerol biosynthetic process	1.02E-02
109	GO:0010588: cotyledon vascular tissue pattern formation	1.12E-02
110	GO:2000012: regulation of auxin polar transport	1.12E-02
111	GO:0009785: blue light signaling pathway	1.12E-02
112	GO:0009734: auxin-activated signaling pathway	1.12E-02
113	GO:0009826: unidimensional cell growth	1.17E-02
114	GO:0010143: cutin biosynthetic process	1.22E-02
115	GO:0009933: meristem structural organization	1.22E-02
116	GO:0010223: secondary shoot formation	1.22E-02
117	GO:0010540: basipetal auxin transport	1.22E-02
118	GO:0042538: hyperosmotic salinity response	1.30E-02
119	GO:0009825: multidimensional cell growth	1.32E-02
120	GO:0010167: response to nitrate	1.32E-02
121	GO:0010030: positive regulation of seed germination	1.32E-02
122	GO:0070588: calcium ion transmembrane transport	1.32E-02
123	GO:0010053: root epidermal cell differentiation	1.32E-02
124	GO:0006486: protein glycosylation	1.39E-02
125	GO:0010025: wax biosynthetic process	1.43E-02
126	GO:0009414: response to water deprivation	1.45E-02
127	GO:2000377: regulation of reactive oxygen species metabolic process	1.54E-02
128	GO:0003333: amino acid transmembrane transport	1.76E-02
129	GO:0010431: seed maturation	1.76E-02
130	GO:0009733: response to auxin	1.84E-02
131	GO:0009740: gibberellic acid mediated signaling pathway	1.87E-02
132	GO:0031348: negative regulation of defense response	1.88E-02
133	GO:0019748: secondary metabolic process	1.88E-02
134	GO:0009294: DNA mediated transformation	2.00E-02
135	GO:0009411: response to UV	2.00E-02
136	GO:0001944: vasculature development	2.00E-02
137	GO:0048443: stamen development	2.12E-02
138	GO:0006284: base-excision repair	2.12E-02
139	GO:0019722: calcium-mediated signaling	2.12E-02
140	GO:0010089: xylem development	2.12E-02
141	GO:0008284: positive regulation of cell proliferation	2.25E-02
142	GO:0006468: protein phosphorylation	2.35E-02
143	GO:0042631: cellular response to water deprivation	2.37E-02
144	GO:0042335: cuticle development	2.37E-02
145	GO:0000413: protein peptidyl-prolyl isomerization	2.37E-02
146	GO:0010087: phloem or xylem histogenesis	2.37E-02
147	GO:0010305: leaf vascular tissue pattern formation	2.50E-02
148	GO:0009408: response to heat	2.64E-02
149	GO:0019252: starch biosynthetic process	2.77E-02
150	GO:0010583: response to cyclopentenone	3.05E-02
151	GO:0016125: sterol metabolic process	3.34E-02
152	GO:0010252: auxin homeostasis	3.34E-02
153	GO:0009639: response to red or far red light	3.34E-02
154	GO:0007267: cell-cell signaling	3.48E-02
155	GO:0016126: sterol biosynthetic process	3.78E-02
156	GO:0007166: cell surface receptor signaling pathway	3.92E-02
157	GO:0042128: nitrate assimilation	4.09E-02
158	GO:0030244: cellulose biosynthetic process	4.57E-02
159	GO:0009407: toxin catabolic process	4.89E-02
160	GO:0010218: response to far red light	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
2	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	0.00E+00
3	GO:0004496: mevalonate kinase activity	0.00E+00
4	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
5	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
6	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
7	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
8	GO:0052689: carboxylic ester hydrolase activity	2.56E-07
9	GO:0016788: hydrolase activity, acting on ester bonds	1.19E-05
10	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.51E-05
11	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.57E-05
12	GO:0016798: hydrolase activity, acting on glycosyl bonds	7.28E-05
13	GO:0030570: pectate lyase activity	1.78E-04
14	GO:0008252: nucleotidase activity	2.92E-04
15	GO:0004476: mannose-6-phosphate isomerase activity	2.92E-04
16	GO:0015245: fatty acid transporter activity	2.92E-04
17	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	2.92E-04
18	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	6.40E-04
19	GO:0003938: IMP dehydrogenase activity	6.40E-04
20	GO:0004565: beta-galactosidase activity	8.88E-04
21	GO:0010329: auxin efflux transmembrane transporter activity	8.88E-04
22	GO:0004075: biotin carboxylase activity	1.04E-03
23	GO:0030267: glyoxylate reductase (NADP) activity	1.04E-03
24	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.04E-03
25	GO:0004871: signal transducer activity	1.21E-03
26	GO:0003878: ATP citrate synthase activity	1.48E-03
27	GO:0004445: inositol-polyphosphate 5-phosphatase activity	1.48E-03
28	GO:0043047: single-stranded telomeric DNA binding	1.48E-03
29	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.48E-03
30	GO:0001872: (1->3)-beta-D-glucan binding	1.48E-03
31	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.97E-03
32	GO:0008810: cellulase activity	1.98E-03
33	GO:0010328: auxin influx transmembrane transporter activity	1.99E-03
34	GO:0052793: pectin acetylesterase activity	1.99E-03
35	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.99E-03
36	GO:0010011: auxin binding	1.99E-03
37	GO:0016836: hydro-lyase activity	1.99E-03
38	GO:0008381: mechanically-gated ion channel activity	2.54E-03
39	GO:0004040: amidase activity	2.54E-03
40	GO:0004623: phospholipase A2 activity	2.54E-03
41	GO:0003989: acetyl-CoA carboxylase activity	2.54E-03
42	GO:0008725: DNA-3-methyladenine glycosylase activity	2.54E-03
43	GO:0019901: protein kinase binding	3.12E-03
44	GO:0004629: phospholipase C activity	3.14E-03
45	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.14E-03
46	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	3.14E-03
47	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	3.14E-03
48	GO:0004747: ribokinase activity	3.77E-03
49	GO:0051753: mannan synthase activity	3.77E-03
50	GO:0004017: adenylate kinase activity	3.77E-03
51	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.77E-03
52	GO:0004435: phosphatidylinositol phospholipase C activity	3.77E-03
53	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.77E-03
54	GO:0051015: actin filament binding	3.80E-03
55	GO:0005200: structural constituent of cytoskeleton	4.30E-03
56	GO:0042162: telomeric DNA binding	4.45E-03
57	GO:0004427: inorganic diphosphatase activity	4.45E-03
58	GO:0016413: O-acetyltransferase activity	4.55E-03
59	GO:0015250: water channel activity	4.82E-03
60	GO:0016829: lyase activity	5.16E-03
61	GO:0004033: aldo-keto reductase (NADP) activity	5.17E-03
62	GO:0008865: fructokinase activity	5.17E-03
63	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.17E-03
64	GO:0030247: polysaccharide binding	5.68E-03
65	GO:0005524: ATP binding	6.56E-03
66	GO:0005096: GTPase activator activity	6.61E-03
67	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	6.71E-03
68	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	6.71E-03
69	GO:0009672: auxin:proton symporter activity	7.54E-03
70	GO:0003993: acid phosphatase activity	8.35E-03
71	GO:0015020: glucuronosyltransferase activity	8.40E-03
72	GO:0004568: chitinase activity	8.40E-03
73	GO:0047372: acylglycerol lipase activity	9.30E-03
74	GO:0008378: galactosyltransferase activity	1.02E-02
75	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.02E-02
76	GO:0008289: lipid binding	1.10E-02
77	GO:0005262: calcium channel activity	1.12E-02
78	GO:0015293: symporter activity	1.16E-02
79	GO:0008083: growth factor activity	1.22E-02
80	GO:0045735: nutrient reservoir activity	1.65E-02
81	GO:0033612: receptor serine/threonine kinase binding	1.76E-02
82	GO:0016787: hydrolase activity	2.09E-02
83	GO:0005102: receptor binding	2.25E-02
84	GO:0003924: GTPase activity	2.64E-02
85	GO:0005516: calmodulin binding	2.92E-02
86	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.20E-02
87	GO:0016791: phosphatase activity	3.34E-02
88	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.48E-02
89	GO:0016301: kinase activity	3.83E-02
90	GO:0005509: calcium ion binding	4.00E-02
91	GO:0008375: acetylglucosaminyltransferase activity	4.09E-02
92	GO:0004674: protein serine/threonine kinase activity	4.29E-02
93	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0005835: fatty acid synthase complex	0.00E+00
2	GO:0005886: plasma membrane	5.45E-11
3	GO:0005576: extracellular region	8.45E-11
4	GO:0005618: cell wall	1.60E-08
5	GO:0048046: apoplast	5.63E-08
6	GO:0009505: plant-type cell wall	1.36E-06
7	GO:0005697: telomerase holoenzyme complex	6.40E-04
8	GO:0031225: anchored component of membrane	8.28E-04
9	GO:0016020: membrane	8.31E-04
10	GO:0009506: plasmodesma	9.10E-04
11	GO:0009897: external side of plasma membrane	1.04E-03
12	GO:0005875: microtubule associated complex	1.24E-03
13	GO:0031977: thylakoid lumen	1.38E-03
14	GO:0032432: actin filament bundle	1.48E-03
15	GO:0009346: citrate lyase complex	1.48E-03
16	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.48E-03
17	GO:0015630: microtubule cytoskeleton	1.48E-03
18	GO:0009531: secondary cell wall	1.48E-03
19	GO:0009986: cell surface	4.45E-03
20	GO:0009543: chloroplast thylakoid lumen	4.67E-03
21	GO:0000784: nuclear chromosome, telomeric region	5.92E-03
22	GO:0009534: chloroplast thylakoid	6.17E-03
23	GO:0045298: tubulin complex	6.71E-03
24	GO:0005884: actin filament	9.30E-03
25	GO:0046658: anchored component of plasma membrane	1.01E-02
26	GO:0030095: chloroplast photosystem II	1.22E-02
27	GO:0005874: microtubule	1.55E-02
28	GO:0009570: chloroplast stroma	1.58E-02
29	GO:0009654: photosystem II oxygen evolving complex	1.65E-02
30	GO:0031410: cytoplasmic vesicle	1.88E-02
31	GO:0015629: actin cytoskeleton	2.00E-02
32	GO:0009579: thylakoid	2.08E-02
33	GO:0009535: chloroplast thylakoid membrane	2.27E-02
34	GO:0019898: extrinsic component of membrane	2.77E-02
35	GO:0005615: extracellular space	3.84E-02
36	GO:0005887: integral component of plasma membrane	3.85E-02
37	GO:0005768: endosome	3.86E-02
38	GO:0009707: chloroplast outer membrane	4.57E-02
39	GO:0000151: ubiquitin ligase complex	4.57E-02