Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G47770

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045014: negative regulation of transcription by glucose0.00E+00
2GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
3GO:0033494: ferulate metabolic process0.00E+00
4GO:1901698: response to nitrogen compound0.00E+00
5GO:0006833: water transport7.35E-08
6GO:0034220: ion transmembrane transport1.80E-05
7GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.47E-05
8GO:0009826: unidimensional cell growth1.17E-04
9GO:0042335: cuticle development2.95E-04
10GO:0006824: cobalt ion transport3.17E-04
11GO:0043266: regulation of potassium ion transport3.17E-04
12GO:0010480: microsporocyte differentiation3.17E-04
13GO:0006723: cuticle hydrocarbon biosynthetic process3.17E-04
14GO:0042547: cell wall modification involved in multidimensional cell growth3.17E-04
15GO:0080051: cutin transport3.17E-04
16GO:2000021: regulation of ion homeostasis3.17E-04
17GO:0034628: 'de novo' NAD biosynthetic process from aspartate3.17E-04
18GO:0071588: hydrogen peroxide mediated signaling pathway3.17E-04
19GO:0010729: positive regulation of hydrogen peroxide biosynthetic process3.17E-04
20GO:0060627: regulation of vesicle-mediated transport3.17E-04
21GO:0070509: calcium ion import3.17E-04
22GO:0007263: nitric oxide mediated signal transduction3.17E-04
23GO:0032544: plastid translation4.03E-04
24GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.31E-04
25GO:0009051: pentose-phosphate shunt, oxidative branch4.84E-04
26GO:0071555: cell wall organization5.84E-04
27GO:0034755: iron ion transmembrane transport6.92E-04
28GO:0045717: negative regulation of fatty acid biosynthetic process6.92E-04
29GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.92E-04
30GO:0010115: regulation of abscisic acid biosynthetic process6.92E-04
31GO:0015908: fatty acid transport6.92E-04
32GO:0009742: brassinosteroid mediated signaling pathway7.88E-04
33GO:0015995: chlorophyll biosynthetic process8.49E-04
34GO:0006013: mannose metabolic process1.12E-03
35GO:0015840: urea transport1.12E-03
36GO:0071705: nitrogen compound transport1.12E-03
37GO:0051176: positive regulation of sulfur metabolic process1.12E-03
38GO:0043447: alkane biosynthetic process1.12E-03
39GO:0015979: photosynthesis1.27E-03
40GO:0010025: wax biosynthetic process1.39E-03
41GO:0005992: trehalose biosynthetic process1.54E-03
42GO:0051639: actin filament network formation1.61E-03
43GO:0034059: response to anoxia1.61E-03
44GO:0006424: glutamyl-tRNA aminoacylation1.61E-03
45GO:0006808: regulation of nitrogen utilization2.16E-03
46GO:0010222: stem vascular tissue pattern formation2.16E-03
47GO:0051764: actin crosslink formation2.16E-03
48GO:0071249: cellular response to nitrate2.16E-03
49GO:0006183: GTP biosynthetic process2.16E-03
50GO:0000919: cell plate assembly2.16E-03
51GO:0009664: plant-type cell wall organization2.38E-03
52GO:0032543: mitochondrial translation2.76E-03
53GO:0006564: L-serine biosynthetic process2.76E-03
54GO:0009435: NAD biosynthetic process2.76E-03
55GO:0009247: glycolipid biosynthetic process2.76E-03
56GO:0046785: microtubule polymerization2.76E-03
57GO:0000271: polysaccharide biosynthetic process2.83E-03
58GO:0009741: response to brassinosteroid3.05E-03
59GO:0018258: protein O-linked glycosylation via hydroxyproline3.40E-03
60GO:0006561: proline biosynthetic process3.40E-03
61GO:0010405: arabinogalactan protein metabolic process3.40E-03
62GO:0006751: glutathione catabolic process3.40E-03
63GO:0006086: acetyl-CoA biosynthetic process from pyruvate3.40E-03
64GO:0055114: oxidation-reduction process3.69E-03
65GO:0016132: brassinosteroid biosynthetic process3.76E-03
66GO:0010583: response to cyclopentenone4.02E-03
67GO:0006694: steroid biosynthetic process4.10E-03
68GO:0010019: chloroplast-nucleus signaling pathway4.10E-03
69GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity4.10E-03
70GO:0042372: phylloquinone biosynthetic process4.10E-03
71GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)4.10E-03
72GO:0010444: guard mother cell differentiation4.84E-03
73GO:0050829: defense response to Gram-negative bacterium4.84E-03
74GO:0051510: regulation of unidimensional cell growth4.84E-03
75GO:0009610: response to symbiotic fungus4.84E-03
76GO:0030497: fatty acid elongation4.84E-03
77GO:0048437: floral organ development4.84E-03
78GO:0071669: plant-type cell wall organization or biogenesis4.84E-03
79GO:0009645: response to low light intensity stimulus4.84E-03
80GO:0010027: thylakoid membrane organization5.44E-03
81GO:0016126: sterol biosynthetic process5.44E-03
82GO:0019375: galactolipid biosynthetic process5.62E-03
83GO:0008610: lipid biosynthetic process5.62E-03
84GO:0006402: mRNA catabolic process5.62E-03
85GO:0030091: protein repair5.62E-03
86GO:0009414: response to water deprivation5.80E-03
87GO:0009808: lignin metabolic process6.44E-03
88GO:0009932: cell tip growth6.44E-03
89GO:0016311: dephosphorylation6.75E-03
90GO:0018298: protein-chromophore linkage7.10E-03
91GO:0030244: cellulose biosynthetic process7.10E-03
92GO:0006633: fatty acid biosynthetic process7.28E-03
93GO:0048589: developmental growth7.30E-03
94GO:0009060: aerobic respiration7.30E-03
95GO:0000160: phosphorelay signal transduction system7.46E-03
96GO:0040008: regulation of growth7.74E-03
97GO:0045490: pectin catabolic process8.21E-03
98GO:0009638: phototropism8.21E-03
99GO:0007623: circadian rhythm8.21E-03
100GO:0055085: transmembrane transport8.31E-03
101GO:0009688: abscisic acid biosynthetic process9.15E-03
102GO:0043069: negative regulation of programmed cell death9.15E-03
103GO:0009870: defense response signaling pathway, resistance gene-dependent9.15E-03
104GO:0006415: translational termination1.01E-02
105GO:0009750: response to fructose1.01E-02
106GO:0018119: peptidyl-cysteine S-nitrosylation1.01E-02
107GO:0048229: gametophyte development1.01E-02
108GO:0000038: very long-chain fatty acid metabolic process1.01E-02
109GO:0015706: nitrate transport1.11E-02
110GO:0010152: pollen maturation1.11E-02
111GO:0042546: cell wall biogenesis1.21E-02
112GO:0006006: glucose metabolic process1.22E-02
113GO:2000028: regulation of photoperiodism, flowering1.22E-02
114GO:0050826: response to freezing1.22E-02
115GO:0009718: anthocyanin-containing compound biosynthetic process1.22E-02
116GO:0010075: regulation of meristem growth1.22E-02
117GO:0010588: cotyledon vascular tissue pattern formation1.22E-02
118GO:0030048: actin filament-based movement1.22E-02
119GO:0009644: response to high light intensity1.26E-02
120GO:0009934: regulation of meristem structural organization1.33E-02
121GO:0010143: cutin biosynthetic process1.33E-02
122GO:0010030: positive regulation of seed germination1.44E-02
123GO:0010167: response to nitrate1.44E-02
124GO:0006468: protein phosphorylation1.45E-02
125GO:0042538: hyperosmotic salinity response1.46E-02
126GO:0009736: cytokinin-activated signaling pathway1.57E-02
127GO:0051017: actin filament bundle assembly1.67E-02
128GO:0009735: response to cytokinin1.67E-02
129GO:0006857: oligopeptide transport1.69E-02
130GO:0007017: microtubule-based process1.80E-02
131GO:0009768: photosynthesis, light harvesting in photosystem I1.80E-02
132GO:0009416: response to light stimulus1.91E-02
133GO:0009626: plant-type hypersensitive response1.99E-02
134GO:0009814: defense response, incompatible interaction2.05E-02
135GO:0016226: iron-sulfur cluster assembly2.05E-02
136GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.18E-02
137GO:0019722: calcium-mediated signaling2.31E-02
138GO:0048443: stamen development2.31E-02
139GO:0045454: cell redox homeostasis2.36E-02
140GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.45E-02
141GO:0042391: regulation of membrane potential2.59E-02
142GO:0000413: protein peptidyl-prolyl isomerization2.59E-02
143GO:0048653: anther development2.59E-02
144GO:0042631: cellular response to water deprivation2.59E-02
145GO:0010305: leaf vascular tissue pattern formation2.73E-02
146GO:0010182: sugar mediated signaling pathway2.73E-02
147GO:0045489: pectin biosynthetic process2.73E-02
148GO:0016042: lipid catabolic process2.96E-02
149GO:0009791: post-embryonic development3.02E-02
150GO:0071554: cell wall organization or biogenesis3.17E-02
151GO:0000302: response to reactive oxygen species3.17E-02
152GO:0002229: defense response to oomycetes3.17E-02
153GO:0007264: small GTPase mediated signal transduction3.32E-02
154GO:0048235: pollen sperm cell differentiation3.32E-02
155GO:0010090: trichome morphogenesis3.48E-02
156GO:0006810: transport3.54E-02
157GO:0009828: plant-type cell wall loosening3.64E-02
158GO:0005975: carbohydrate metabolic process3.74E-02
159GO:0007267: cell-cell signaling3.80E-02
160GO:0007166: cell surface receptor signaling pathway4.42E-02
161GO:0042128: nitrate assimilation4.46E-02
162GO:0010411: xyloglucan metabolic process4.63E-02
RankGO TermAdjusted P value
1GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
2GO:1990534: thermospermine oxidase activity0.00E+00
3GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
4GO:0050614: delta24-sterol reductase activity0.00E+00
5GO:0005222: intracellular cAMP activated cation channel activity0.00E+00
6GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
7GO:0008987: quinolinate synthetase A activity0.00E+00
8GO:0010301: xanthoxin dehydrogenase activity0.00E+00
9GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
10GO:0015250: water channel activity3.53E-06
11GO:0016851: magnesium chelatase activity3.61E-05
12GO:0019843: rRNA binding1.67E-04
13GO:0051920: peroxiredoxin activity2.00E-04
14GO:0051753: mannan synthase activity2.00E-04
15GO:0015200: methylammonium transmembrane transporter activity3.17E-04
16GO:0015245: fatty acid transporter activity3.17E-04
17GO:0004328: formamidase activity3.17E-04
18GO:0005221: intracellular cyclic nucleotide activated cation channel activity3.17E-04
19GO:0000248: C-5 sterol desaturase activity3.17E-04
20GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.17E-04
21GO:0080132: fatty acid alpha-hydroxylase activity3.17E-04
22GO:0016209: antioxidant activity3.28E-04
23GO:0004805: trehalose-phosphatase activity6.67E-04
24GO:0003839: gamma-glutamylcyclotransferase activity6.92E-04
25GO:0004617: phosphoglycerate dehydrogenase activity6.92E-04
26GO:0003938: IMP dehydrogenase activity6.92E-04
27GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity6.92E-04
28GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity6.92E-04
29GO:0017150: tRNA dihydrouridine synthase activity1.12E-03
30GO:0050734: hydroxycinnamoyltransferase activity1.12E-03
31GO:0004148: dihydrolipoyl dehydrogenase activity1.12E-03
32GO:0052689: carboxylic ester hydrolase activity1.20E-03
33GO:0005528: FK506 binding1.54E-03
34GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.61E-03
35GO:0017057: 6-phosphogluconolactonase activity1.61E-03
36GO:0001872: (1->3)-beta-D-glucan binding1.61E-03
37GO:0035250: UDP-galactosyltransferase activity1.61E-03
38GO:0016149: translation release factor activity, codon specific1.61E-03
39GO:0015204: urea transmembrane transporter activity2.16E-03
40GO:0010011: auxin binding2.16E-03
41GO:0004345: glucose-6-phosphate dehydrogenase activity2.16E-03
42GO:0016836: hydro-lyase activity2.16E-03
43GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity2.16E-03
44GO:0046527: glucosyltransferase activity2.16E-03
45GO:0052793: pectin acetylesterase activity2.16E-03
46GO:0004506: squalene monooxygenase activity2.16E-03
47GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.17E-03
48GO:0030570: pectate lyase activity2.22E-03
49GO:0009922: fatty acid elongase activity2.76E-03
50GO:0005516: calmodulin binding3.39E-03
51GO:0016688: L-ascorbate peroxidase activity3.40E-03
52GO:0008519: ammonium transmembrane transporter activity3.40E-03
53GO:1990714: hydroxyproline O-galactosyltransferase activity3.40E-03
54GO:0004130: cytochrome-c peroxidase activity3.40E-03
55GO:0016208: AMP binding3.40E-03
56GO:0035673: oligopeptide transmembrane transporter activity3.40E-03
57GO:0005261: cation channel activity4.10E-03
58GO:0004559: alpha-mannosidase activity4.10E-03
59GO:0005242: inward rectifier potassium channel activity4.10E-03
60GO:0033743: peptide-methionine (R)-S-oxide reductase activity4.10E-03
61GO:0000156: phosphorelay response regulator activity4.28E-03
62GO:0016722: oxidoreductase activity, oxidizing metal ions4.84E-03
63GO:0016597: amino acid binding5.13E-03
64GO:0016758: transferase activity, transferring hexosyl groups5.26E-03
65GO:0016168: chlorophyll binding5.75E-03
66GO:0016829: lyase activity6.02E-03
67GO:0003747: translation release factor activity7.30E-03
68GO:0005096: GTPase activator activity7.46E-03
69GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.51E-03
70GO:0005381: iron ion transmembrane transporter activity8.21E-03
71GO:0008047: enzyme activator activity9.15E-03
72GO:0003993: acid phosphatase activity9.42E-03
73GO:0047372: acylglycerol lipase activity1.01E-02
74GO:0016491: oxidoreductase activity1.04E-02
75GO:0015198: oligopeptide transporter activity1.11E-02
76GO:0008378: galactosyltransferase activity1.11E-02
77GO:0004022: alcohol dehydrogenase (NAD) activity1.22E-02
78GO:0005262: calcium channel activity1.22E-02
79GO:0004565: beta-galactosidase activity1.22E-02
80GO:0004672: protein kinase activity1.28E-02
81GO:0008131: primary amine oxidase activity1.33E-02
82GO:0003774: motor activity1.33E-02
83GO:0030552: cAMP binding1.44E-02
84GO:0030553: cGMP binding1.44E-02
85GO:0016788: hydrolase activity, acting on ester bonds1.47E-02
86GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.56E-02
87GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.56E-02
88GO:0031409: pigment binding1.56E-02
89GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.56E-02
90GO:0050660: flavin adenine dinucleotide binding1.72E-02
91GO:0005216: ion channel activity1.80E-02
92GO:0019706: protein-cysteine S-palmitoyltransferase activity1.92E-02
93GO:0004707: MAP kinase activity1.92E-02
94GO:0033612: receptor serine/threonine kinase binding1.92E-02
95GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.05E-02
96GO:0004650: polygalacturonase activity2.05E-02
97GO:0003824: catalytic activity2.18E-02
98GO:0016760: cellulose synthase (UDP-forming) activity2.18E-02
99GO:0022891: substrate-specific transmembrane transporter activity2.18E-02
100GO:0008514: organic anion transmembrane transporter activity2.31E-02
101GO:0004674: protein serine/threonine kinase activity2.46E-02
102GO:0042803: protein homodimerization activity2.50E-02
103GO:0004871: signal transducer activity2.50E-02
104GO:0030551: cyclic nucleotide binding2.59E-02
105GO:0003713: transcription coactivator activity2.73E-02
106GO:0019901: protein kinase binding3.02E-02
107GO:0046983: protein dimerization activity3.03E-02
108GO:0003924: GTPase activity3.07E-02
109GO:0016762: xyloglucan:xyloglucosyl transferase activity3.17E-02
110GO:0051015: actin filament binding3.48E-02
111GO:0005515: protein binding3.78E-02
112GO:0005200: structural constituent of cytoskeleton3.80E-02
113GO:0016413: O-acetyltransferase activity3.96E-02
114GO:0008289: lipid binding4.60E-02
115GO:0030247: polysaccharide binding4.63E-02
116GO:0016798: hydrolase activity, acting on glycosyl bonds4.63E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0009505: plant-type cell wall5.18E-09
3GO:0046658: anchored component of plasma membrane8.22E-07
4GO:0009570: chloroplast stroma1.46E-06
5GO:0031225: anchored component of membrane1.20E-05
6GO:0010007: magnesium chelatase complex1.62E-05
7GO:0005886: plasma membrane3.31E-05
8GO:0009534: chloroplast thylakoid1.51E-04
9GO:0009543: chloroplast thylakoid lumen1.67E-04
10GO:0005887: integral component of plasma membrane2.11E-04
11GO:0009941: chloroplast envelope2.13E-04
12GO:0009507: chloroplast2.24E-04
13GO:0005576: extracellular region2.72E-04
14GO:0009782: photosystem I antenna complex3.17E-04
15GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex3.17E-04
16GO:0016020: membrane4.05E-04
17GO:0009897: external side of plasma membrane1.12E-03
18GO:0009531: secondary cell wall1.61E-03
19GO:0032432: actin filament bundle1.61E-03
20GO:0031977: thylakoid lumen1.61E-03
21GO:0005618: cell wall2.41E-03
22GO:0009506: plasmodesma3.12E-03
23GO:0009533: chloroplast stromal thylakoid4.84E-03
24GO:0042807: central vacuole4.84E-03
25GO:0016021: integral component of membrane4.89E-03
26GO:0005773: vacuole5.35E-03
27GO:0000326: protein storage vacuole6.44E-03
28GO:0045298: tubulin complex7.30E-03
29GO:0009579: thylakoid7.49E-03
30GO:0015934: large ribosomal subunit8.22E-03
31GO:0009536: plastid9.05E-03
32GO:0016459: myosin complex9.15E-03
33GO:0055028: cortical microtubule9.15E-03
34GO:0005884: actin filament1.01E-02
35GO:0000139: Golgi membrane1.10E-02
36GO:0000311: plastid large ribosomal subunit1.11E-02
37GO:0048046: apoplast1.24E-02
38GO:0000312: plastid small ribosomal subunit1.33E-02
39GO:0030659: cytoplasmic vesicle membrane1.33E-02
40GO:0030076: light-harvesting complex1.44E-02
41GO:0005794: Golgi apparatus1.71E-02
42GO:0009654: photosystem II oxygen evolving complex1.80E-02
43GO:0010287: plastoglobule2.66E-02
44GO:0009535: chloroplast thylakoid membrane2.85E-02
45GO:0009523: photosystem II3.02E-02
46GO:0019898: extrinsic component of membrane3.02E-02
47GO:0071944: cell periphery3.48E-02
48GO:0005778: peroxisomal membrane3.80E-02
49GO:0009705: plant-type vacuole membrane3.87E-02
50GO:0030529: intracellular ribonucleoprotein complex4.12E-02
<
Gene type



Gene DE type